cluster # 3544

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Oryza sativa
cluster # 3544 cluster # 3544 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3544#0 length = 1889 sequences # 2
consensusID : consensus_3544#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1889
fasta sequence
                              [GGCGACGGCGAGCTCGCCGCATTTCGTGATCCCGGCGGAAGCTTTGTCATGCTATTATCGCCGATTGGGTTTTCTTTATTTTCTTTTTCTCGCGTTCTTGCGTGATTTTAGGGGGGGATTCTTGACGTGCGTTACCTACGGTTTCGTGTCGCGGCTGCTGCACGTAAATCTGGGGGGAGAGAGAGAGAGAGAGAGAGAGCTTGGGCTTTTGGGGCTCTTGCTGTGTTTTTGTTTGACTTGACCACGTCTATAACTTCTGCTGCTACTTTTTTTTCTCAGCTTGCAGAGATTCTTGCCTTGTGAAGCTCTGCTTCAGTGCATGAATGTGTTTTTAGCTTCAAGATATTGATCTTAACGTGCACTGATATATTTCTGTACTCTTTGATCTTTTATGCGAACCTGGCAAGCCAGCTGCTGCTGCTTTGCTGGCTGTAAACTCGTTGGCATTGTTGTTTGCGATGTGGTATACTTGTTCATGATGTTGTTCAAATGCAATGCTGCATTGCTCTGGTGCGATTCATAGTCTATGATTTATTAATTTTGGCGTAGTAGTGGATGGTAACATATTGGGAGGATTGGTTCAGAGTACATCATTTCCCATTACATGTGGAGTCTCTGTCTCTGAAATGTTAGCATGTATTGGTGGAACTCTACACATAGCTGTGTGAACTCATGGTGCGGTGAGCATTTGCAAACAATTTGGTTCCTCCGCATGCATGAATCAGTGATGAATTTGTCTGAACCGTGTGTGCGCGCCAGTAAGATGTTGGGAATCTCAGATTTGTTTCAAACGCTTGCAAAATCCTTAGTTTCTGTCTGGTATTGTAGAAATGAAATTGCCATTTCTAGGAAACACCTTTTAGGGCTTAAATCCTTGTAGTATAATGTTTTATGCACTTGTTTCACTGTCACATCCATTGTATGGATGCATATAATCTTCCTCTTTGTATGAATGCATATCATCTTCTGTGATTTATCTTCTTATTTTTACTGTTTAGTGATGTATCCGCATACCAGTTTATTAAGCCAAGTGTAGCTTTGTCCAAAAGTAAGACTGCCCAAAGACATCATTATGGATAATATGTGTTGTAATGAGGATGCATGATTGCTTATTTGCTTTATTTCTGTTTATGATGAATATCTTATTATCAAAACATGCACATCTTCCTGTTTCGCTTAAGTCTGCAATATGTTGTTGATGTTTCAACTGTTTACTGTACATGAACCTTGTTGATCAGACGAATTTATTTCCTTTTGACCCTCTTAGTCAAACGTTGGTTTTGAGCATTTTTGTGCTACATGGCCCATTCTAGTAGAAATATCACAGGCTTTTGTTCATTTACATGCACCATTTTCTTTCTCATGGTAGAGAAAAACATGGAACAATTTTATTACACTTTCCATGGAAAAGTTTTTTTTTTCTGTAGATTTCTCGATTTCTGTGATTTTAAGTATATTTCCTTGTCCCACTCTTCTACACTATGAAATATGCACCTATTTATTTACTCACACTTTCTTGTTTGCACTATGCAGTTTGTAGAAAGTGTATCTATAAGAAGATTAATGATGAAGAGCTAGAGCACTGTCCAGTCTGTAAAATTGATCTTGGCTGTGCTCCCCTCGAGAAGCTTAGAGCTGATCACAATATACAAGATGTGAGGTCAAAAATATTTCCATTGAAAAGAAAGAAGGTTAATGCTGAAGAGGTTGAATCTCCTATTGCGCCGCCTGCTAAAAGGAAAGAGAGATCTATCTCTTCATTGGTGGTCAATACACCTGAAATAACACCAAAGAGTTTGACAGGGCGCCGAACAAGGGCATCTACCAGGAAGTCTGCTGCCGCATTACGTGACCTTGGTCCTATCATTCCTCCTGTGAAAAAGGATAGT]

[+] EMBL AK102450             [GGCGACGGCGAGCTCGCCGCATTTCGTGATCCCGGCGGAAGCTTTGTCATGCTATTATCGCCGATTGGGTTTTCTTTATTTTCTTTTTCTCGCGTTCTTGCGTGATTTTAGGGGGGGATTCTTGACGTGCGTTACCTACGGTTTCGTGTCGCGGCTGCTGCACGTAAATCTGGGGGGAGAGAGAGAGAGAGAGAGAGAGCTTGGGCTTTTGGGGCTCTTGCTGTGTTTTTGTTTGACTTGACCACGTCTATAACTTCTGCTGCTACTTTTTTTTCTCAGCTTGCAGAGATTCTTGCCTTGTGAAGCTCTGCTTCAGTGCATGAATGTGTTTTTAGCTTCAAGATATTGATCTTAACGTGCACTGATATATTTCTGTACTCTTTGATCTTTTATGCGAACCTGGCAAGCCAGCTGCTGCTGCTTTGCTGGCTGTAAACTCGTTGGCATTGTTGTTTGCGATGTGGTATACTTGTTCATGATGTTGTTCAAATGCAATGCTGCATTGCTCTGGTGCGATTCATAGTCTATGATTTATTAATTTTGGCGTAGTAGTGGATGGTAACATATTGGGAGGATTGGTTCAGAGTACATCATTTCCCATTACATGTGGAGTCTCTGTCTCTGAAATGTTAGCATGTATTGGTGGAACTCTACACATAGCTGTGTGAACTCATGGTGCGGTGAGCATTTGCAAACAATTTGGTTCCTCCGCATGCATGAATCAGTGATGAATTTGTCTGAACCGTGTGTGCGCGCCAGTAAGATGTTGGGAATCTCAGATTTGTTTCAAACGCTTGCAAAATCCTTAGTTTCTGTCTGGTATTGTAGAAATGAAATTGCCATTTCTAGGAAACACCTTTTAGGGCTTAAATCCTTGTAGTATAATGTTTTATGCACTTGTTTCACTGTCACATCCATTGTATGGATGCATATAATCTTCCTCTTTGTATGAATGCATATCATCTTCTGTGATTTATCTTCTTATTTTTACTGTTTAGTGATGTATCCGCATACCAGTTTATTAAGCCAAGTGTAGCTTTGTCCAAAAGTAAGACTGCCCAAAGACATCATTATGGATAATATGTGTTGTAATGAGGATGCATGATTGCTTATTTGCTTTATTTCTGTTTATGATGAATATCTTATTATCAAAACATGCACATCTTCCTGTTTCGCTTAAGTCTGCAATATGTTGTTGATGTTTCAACTGTTTACTGTACATGAACCTTGTTGATCAGACGAATTTATTTCCTTTTGACCCTCTTAGTCAAACGTTGGTTTTGAGCATTTTTGTGCTACATGGCCCATTCTAGTAGAAATATCACAGGCTTTTGTTCATTTACATGCACCATTTTCTTTCTCATGGTAGAGAAAAACATGGAACAATTTTATTACACTTTCCATGGAAAAGTTTTTTTTTTCTGTAGATTTCTCGATTTCTGTGATTTTAAGTATATTTCCTTGTCCCACTCTTCTACACTATGAAATATGCACCTATTTATTTACTCACACTTTCTTGTTTGCACTATGCAGTTTGTAGAAAGTGTATCTATAAGAAGATTAATGATGAAGAGCTAGAGCACTGTCCAGTCTGTAAAATTGATCTTGGCTGTGCTCCCCTCGAGAAGCTTAGAGCTGATCACAATATACAAGATGTGAGGTCAAAAATATTTCCATTGAAAAGAAAGAAGGTTAATGCTGAAGAGGTTGAATCTCCTATTGCGCCGCCTGCTAAAAGGAAAGAGAGATCTATCTCTTCATTGGTGGTCAATACACCTGAAATAACACCAAAGAGTTTGACAGGGCGCCGAACAAGGGCATCTACCAGGAAGTCTGCTGCCGCATTACGTGACCTTGGTCCTATCATTCCTCCTGTGAAAAAGGATAGT]
[+] EMBL CB619244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAAGTGTATCTATAAGAAGATTAATGATGAAGAGCTAGAGCACTGTCCAGTCTGTAAAATTGATCTTGGCTGTGCTCCCCTCGAGAAGCTTAGAGCTGATCACAATATACAAGATGTGAGGTCAAAAATATTTCCATTGAAAAGAAAGAAGGTTAATGCTGAAGAGGTTGAATCTCCTATTGCGCCGCCTGCTAAAAGGAAAGAGAGATCTATCTCTTCATTGGTGGTCAATACACCTGAAATAACACCAAAGAGTTTGACAGGGCGCCGAACAAGGGCATCTACCAGGAAGTCTGCTGCCGCATTACGTGACCTTGGTCCTATCATTCCTCCTGTGAAAAAGGATAGT]




>consensus_3544#0
GGCGACGGCGAGCTCGCCGCATTTCGTGATCCCGGCGGAAGCTTTGTCATGCTATTATCG
CCGATTGGGTTTTCTTTATTTTCTTTTTCTCGCGTTCTTGCGTGATTTTAGGGGGGGATT
CTTGACGTGCGTTACCTACGGTTTCGTGTCGCGGCTGCTGCACGTAAATCTGGGGGGAGA
GAGAGAGAGAGAGAGAGAGCTTGGGCTTTTGGGGCTCTTGCTGTGTTTTTGTTTGACTTG
ACCACGTCTATAACTTCTGCTGCTACTTTTTTTTCTCAGCTTGCAGAGATTCTTGCCTTG
TGAAGCTCTGCTTCAGTGCATGAATGTGTTTTTAGCTTCAAGATATTGATCTTAACGTGC
ACTGATATATTTCTGTACTCTTTGATCTTTTATGCGAACCTGGCAAGCCAGCTGCTGCTG
CTTTGCTGGCTGTAAACTCGTTGGCATTGTTGTTTGCGATGTGGTATACTTGTTCATGAT
GTTGTTCAAATGCAATGCTGCATTGCTCTGGTGCGATTCATAGTCTATGATTTATTAATT
TTGGCGTAGTAGTGGATGGTAACATATTGGGAGGATTGGTTCAGAGTACATCATTTCCCA
TTACATGTGGAGTCTCTGTCTCTGAAATGTTAGCATGTATTGGTGGAACTCTACACATAG
CTGTGTGAACTCATGGTGCGGTGAGCATTTGCAAACAATTTGGTTCCTCCGCATGCATGA
ATCAGTGATGAATTTGTCTGAACCGTGTGTGCGCGCCAGTAAGATGTTGGGAATCTCAGA
TTTGTTTCAAACGCTTGCAAAATCCTTAGTTTCTGTCTGGTATTGTAGAAATGAAATTGC
CATTTCTAGGAAACACCTTTTAGGGCTTAAATCCTTGTAGTATAATGTTTTATGCACTTG
TTTCACTGTCACATCCATTGTATGGATGCATATAATCTTCCTCTTTGTATGAATGCATAT
CATCTTCTGTGATTTATCTTCTTATTTTTACTGTTTAGTGATGTATCCGCATACCAGTTT
ATTAAGCCAAGTGTAGCTTTGTCCAAAAGTAAGACTGCCCAAAGACATCATTATGGATAA
TATGTGTTGTAATGAGGATGCATGATTGCTTATTTGCTTTATTTCTGTTTATGATGAATA
TCTTATTATCAAAACATGCACATCTTCCTGTTTCGCTTAAGTCTGCAATATGTTGTTGAT
GTTTCAACTGTTTACTGTACATGAACCTTGTTGATCAGACGAATTTATTTCCTTTTGACC
CTCTTAGTCAAACGTTGGTTTTGAGCATTTTTGTGCTACATGGCCCATTCTAGTAGAAAT
ATCACAGGCTTTTGTTCATTTACATGCACCATTTTCTTTCTCATGGTAGAGAAAAACATG
GAACAATTTTATTACACTTTCCATGGAAAAGTTTTTTTTTTCTGTAGATTTCTCGATTTC
TGTGATTTTAAGTATATTTCCTTGTCCCACTCTTCTACACTATGAAATATGCACCTATTT
ATTTACTCACACTTTCTTGTTTGCACTATGCAGTTTGTAGAAAGTGTATCTATAAGAAGA
TTAATGATGAAGAGCTAGAGCACTGTCCAGTCTGTAAAATTGATCTTGGCTGTGCTCCCC
TCGAGAAGCTTAGAGCTGATCACAATATACAAGATGTGAGGTCAAAAATATTTCCATTGA
AAAGAAAGAAGGTTAATGCTGAAGAGGTTGAATCTCCTATTGCGCCGCCTGCTAAAAGGA
AAGAGAGATCTATCTCTTCATTGGTGGTCAATACACCTGAAATAACACCAAAGAGTTTGA
CAGGGCGCCGAACAAGGGCATCTACCAGGAAGTCTGCTGCCGCATTACGTGACCTTGGTC
CTATCATTCCTCCTGTGAAAAAGGATAGT
clustalw multiple alignements is not computed in this case