cluster # 3600

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Oryza sativa
cluster # 3600 cluster # 3600 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3600#0 length = 1498 sequences # 2
consensusID : consensus_3600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1498
fasta sequence
                              [CGAAGTCGGGGGAAATTTTTCTTGGGCGGGAGAGGGGAGGGGATTGCCATTGCTGCTGCTGCTAATGGCGGAAACCCTAGCCGAGGACGCCGCCGACGCGCCGCTCGACGCGGCGGCCATTCGAAGCCGGTTGGAGCGGCTCGCGCTGTCGCGGCGAGGGGAGGAGGAGGTTGCTTCGGCGGCGGCGGCGGCGGCGGACGCGGTGCGCCGCCTTC-CCTCCGTGGAGGACGTGGAACCTTTGCAGGGGTTGGAATTCGACGCATGGGCCTCGAGCGCCGCGCCGATGGAGAGCGACTTTGATGCGTTCATGGAATGGTTGAGTAAGGAGGTAAGCTTGGCTGAGGAGGAGAACCGCAAACTATCTGTTGAAATTAGCAGCGTTGCAGAGACAACTCTCAAAGATTCGATTCAGTTGGATGCTGATATTGCCGAATTGGAGTCTTCATTGAAGAAAATTGATTCACAGGGTTTGAAACACTTGGAGGCAAGCCACATCGCTGAGTTATCAGTTTCAACTGATTCATGCAGAGACCAAATTAAATTTGACAAGGACTACAAGTATGAGGTACTGGAACTTAACCAACAGCTGGAAAAATATGAGAATGACCTGAAGCTGTTAGAAAACCAAAAAAGTGCTGAAGCAATGTGGGAACTTGAATCTATGTTATCAGAAGCAAATGTTTTAGACTTTAAAGACAATTGTCTCAGGGTATTCCTGAAGGAAGCTGTACTCACGCCTGAATGTTTAATGTACGGGAAAGAGTCAGATTGTTCTGTTAATTCATTCGTTTCAGACCATGAATTGCTGATAGAAGTTGGAGAAAACATGGAACCAAAGAGAGTGCAGATATTTCCTGATGATACCTGTGTAGATATACTTCTTGATAAGCTCAAGGCCTCCAGAGAGACCATTTCTACTACATCACTGGGATGGATTATTCGGCAATTTCAACACCACATTATAATCAACACTTTGAGGCGTTCCTTGGTGAAAGATGCTAATAATTCCAGGCATTCTTTTGAGTACATTGACAAAGATGGGACAATTCTAGCTCACTTAGCGGGTGGCATTGATGCCTTCATCAAGATATCTGCAGACTGGCCACTGTCATCCTGCGGCCTGAAGTTAATCTCCATTCACAGTTCCAGGGCGCAGTCAGCAGATATTTCTTTAGCTTTGCTTTCCAAAACAAAGGAACTGGCCAATGGATTGGAGCTTCAGACTCGTCGACATCTGGTGAAGTTTGTAGATGCAATTGAAGATATTCTTTTTCGAGAGATGCGGTCGTAGCAGCTCCATTCCAGCAAAGCATGTCTTAGAAGACTAGACTTGACCCAACCAGCCTCCCCATCATCTTGATGACAAGGAGAACGTAGCATATCAATCTCCGGGTGACCACCTTGTAAGCTTGCACGTTGTAAAGGTCTGATCACATTTATTAATGTGCGCATGAGATGTTTAAGAAATGACCAGTAAAAGCATGGGAAAACATAAACT]

[+] EMBL AK064080             [CGAAGTCGGGGGAAATTTTTCTTGGGCGGGAGAGGGGAGGGGATTGCCATTGCTGCTGCTGCTAATGGCGGAAACCCTAGCCGAGGACGCCGCCGACGCGCCGCTCGACGCGGCGGCCATTCGAAGCCGGTTGGAGCGGCTCGCGCTGTCGCGGCGAGGGGAGGAGGAGGTTGCTTCGGCGGCGGCGGCGGCGGCGGACGCGGTGCGCCGCCTTC CCTCCGTGGAGGACGTGGAACCTTTGCAGGGGTTGGAATTCGACGCATGGGCCTCGAGCGCCGCGCCGATGGAGAGCGACTTTGATGCGTTCATGGAATGGTTGAGTAAGGAGGTAAGCTTGGCTGAGGAGGAGAACCGCAAACTATCTGTTGAAATTAGCAGCGTTGCAGAGACAACTCTCAAAGATTCGATTCAGTTGGATGCTGATATTGCCGAATTGGAGTCTTCATTGAAGAAAATTGATTCACAGGGTTTGAAACACTTGGAGGCAAGCCACATCGCTGAGTTATCAGTTTCAACTGATTCATGCAGAGACCAAATTAAATTTGACAAGGACTACAAGTATGAGGTACTGGAACTTAACCAACAGCTGGAAAAATATGAGAATGACCTGAAGCTGTTAGAAAACCAAAAAAGTGCTGAAGCAATGTGGGAACTTGAATCTATGTTATCAGAAGCAAATGTTTTAGACTTTAAAGACAATTGTCTCAGGGTATTCCTGAAGGAAGCTGTACTCACGCCTGAATGTTTAATGTACGGGAAAGAGTCAGATTGTTCTGTTAATTCATTCGTTTCAGACCATGAATTGCTGATAGAAGTTGGAGAAAACATGGAACCAAAGAGAGTGCAGATATTTCCTGATGATACCTGTGTAGATATACTTCTTGATAAGCTCAAGGCCTCCAGAGAGACCATTTCTACTACATCACTGGGATGGATTATTCGGCAATTTCAACACCACATTATAATCAACACTTTGAGGCGTTCCTTGGTGAAAGATGCTAATAATTCCAGGCATTCTTTTGAGTACATTGACAAAGATGGGACAATTCTAGCTCACTTAGCGGGTGGCATTGATGCCTTCATCAAGATATCTGCAGACTGGCCACTGTCATCCTGCGGCCTGAAGTTAATCTCCATTCACAGTTCCAGGGCGCAGTCAGCAGATATTTCTTTAGCTTTGCTTTCCAAAACAAAGGAACTGGCCAATGGATTGGAGCTTCAGACTCGTCGACATCTGGTGAAGTTTGTAGATGCAATTGAAGATATTCTTTTTCGAGAGATGCGGTCGTAGCAGCTCCATTCCAGCAAAGCATGTCTTAGAAGACTAGACTTGACCCAACCAGCCTCCCCATCATCTTGATGACAAGGAGAACGTAGCATATCAATCTCCGGGTGACCACCTTGTAAGCTTGCACGTTGTAAAGGTCTGATCACATTTATTAATGTGCGCATGAGATGTTTAAGAAATGACCAGTAAAAGCATGGGAAAACATAAACT]
[+] EMBL D42570               [                                                                                                                                                    TCGC GCGAGANGNGNAGGAGGTTGCTTCGGCGGCGGCGGCGGCGGCGGACTGGNT  GCTG  TNCNCCTCCGTGGA GACNTGGAACCTTTGCAGGGGTTGGAATTCGACGCATGGGCCTCGAGCGCCGC CCGATGGAGAGCGACTTTGATGCGTTCATGGAATGGTTGAGTAAGGAGGTAAGCTTGGCTGAGGAGGAGAACCGCAAACTATCTGTTGAAATTAGCAGCGTT CAGAGACAACTCTCAAAGATTCGATTCAGTTGGATGCTGATATTGCCGAATTGGAGTCTTCATTGAAGAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_3600#0
CGAAGTCGGGGGAAATTTTTCTTGGGCGGGAGAGGGGAGGGGATTGCCATTGCTGCTGCT
GCTAATGGCGGAAACCCTAGCCGAGGACGCCGCCGACGCGCCGCTCGACGCGGCGGCCAT
TCGAAGCCGGTTGGAGCGGCTCGCGCTGTCGCGGCGAGGGGAGGAGGAGGTTGCTTCGGC
GGCGGCGGCGGCGGCGGACGCGGTGCGCCGCCTTCCCTCCGTGGAGGACGTGGAACCTTT
GCAGGGGTTGGAATTCGACGCATGGGCCTCGAGCGCCGCGCCGATGGAGAGCGACTTTGA
TGCGTTCATGGAATGGTTGAGTAAGGAGGTAAGCTTGGCTGAGGAGGAGAACCGCAAACT
ATCTGTTGAAATTAGCAGCGTTGCAGAGACAACTCTCAAAGATTCGATTCAGTTGGATGC
TGATATTGCCGAATTGGAGTCTTCATTGAAGAAAATTGATTCACAGGGTTTGAAACACTT
GGAGGCAAGCCACATCGCTGAGTTATCAGTTTCAACTGATTCATGCAGAGACCAAATTAA
ATTTGACAAGGACTACAAGTATGAGGTACTGGAACTTAACCAACAGCTGGAAAAATATGA
GAATGACCTGAAGCTGTTAGAAAACCAAAAAAGTGCTGAAGCAATGTGGGAACTTGAATC
TATGTTATCAGAAGCAAATGTTTTAGACTTTAAAGACAATTGTCTCAGGGTATTCCTGAA
GGAAGCTGTACTCACGCCTGAATGTTTAATGTACGGGAAAGAGTCAGATTGTTCTGTTAA
TTCATTCGTTTCAGACCATGAATTGCTGATAGAAGTTGGAGAAAACATGGAACCAAAGAG
AGTGCAGATATTTCCTGATGATACCTGTGTAGATATACTTCTTGATAAGCTCAAGGCCTC
CAGAGAGACCATTTCTACTACATCACTGGGATGGATTATTCGGCAATTTCAACACCACAT
TATAATCAACACTTTGAGGCGTTCCTTGGTGAAAGATGCTAATAATTCCAGGCATTCTTT
TGAGTACATTGACAAAGATGGGACAATTCTAGCTCACTTAGCGGGTGGCATTGATGCCTT
CATCAAGATATCTGCAGACTGGCCACTGTCATCCTGCGGCCTGAAGTTAATCTCCATTCA
CAGTTCCAGGGCGCAGTCAGCAGATATTTCTTTAGCTTTGCTTTCCAAAACAAAGGAACT
GGCCAATGGATTGGAGCTTCAGACTCGTCGACATCTGGTGAAGTTTGTAGATGCAATTGA
AGATATTCTTTTTCGAGAGATGCGGTCGTAGCAGCTCCATTCCAGCAAAGCATGTCTTAG
AAGACTAGACTTGACCCAACCAGCCTCCCCATCATCTTGATGACAAGGAGAACGTAGCAT
ATCAATCTCCGGGTGACCACCTTGTAAGCTTGCACGTTGTAAAGGTCTGATCACATTTAT
TAATGTGCGCATGAGATGTTTAAGAAATGACCAGTAAAAGCATGGGAAAACATAAACT
clustalw multiple alignements is not computed in this case