Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3689 cluster # 3689       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3689#0 length = 750 sequences # 2  

consensusID : consensus_3689#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 750
fasta sequence
                              [TCCTTTTTTTTCCTCATGCTTTTCGCCAATTGAGCGTACTCACCACTTCCTTCAGTGGAGGAGAAATGTCTGGTTATGAAACTAAAAACTCCTGAGAAGATACAAAAGTGCAAAATGGTAATATGTCAGCAGCTGTACACAACATGTTACAAGACCAGAAAAACTACTACTACGTAATACCACATTTGCTCTATGCACTGAGCTACAATTTTGTCATTGTATAACTGCAATCTACCTTGACTGCCTTGTGCCTTCTATATCTTCAGTCGGAGCCTACACTGTCCAGGCAGGAAACTACCTCTGTGATAGTTGGCCGCATGCAAGGATTACAGTTGACACATTTGCAAGCAACTTCAAGCACCTTGAGCATCTGTTCTTCATTCCCTGTGCCTTGGAGTGTTGGATCCAGGACCTCAAGCATGTTTCCCTTGGACTTCATTTCTAGCACCCATTGAACAAGTTCCTCTGATGTAGAGAGGATTGAAACAGGCCGTCTTCCTGTGAGTAGCTCAAGCAGGACCACTCCAAAACTGTACACATCGCCTCTTAAGGTAGCAACCCATCCTTGTCCATACTCAGGTGGGATGTAACCTAGAGTGCCGACTAGCTCTGTTGTGATGTGGTTTTTGTTCGGAAGGATCAATCTTGACAACCCAAAATCAGCGACATAAGCTTTGAATTCTTTGTCAAGTAGAATGTTGCTGGACTTGATGTCACGGTGGACAATGTGAGGCTTGCAAACATCATGGA]

[+] EMBL CB635436             [TCCTTTTTTTTCCTCATGCTTTTCGCCAATTGAGCGTACTCACCACTTCCTTCAGTGGAGGAGAAATGTCTGGTTATGAAACTAAAAACTCCTGAGAAGATACAAAAGTGCAAAATGGTAATATGTCAGCAGCTGTACACAACATGTTACAAGACCAGAAAAACTACTACTACGTAATACCACATTTGCTCTATGCACTGAGCTACAATTTTGTCATTGTATAACTGCAATCTACCTTGACTGCCTTGTGCCTTCTATATCTTCAGTCGGAGCCTACACTGTCCAGGCAGGAAACTACCTCTGTGATAGTTGGCCGCATGCAAGGATTACAGTTGACACATTTGCAAGCAACTTCAAGCACCTTGAGCATCTGTTCTTCATTCCCTGTGCCTTGGAGTGTTGGATCCAGGACCTCAAGCATGTTTCCCTTGGACTTCATTTCTAGCACCCATTGAACAAGTTCCTCTGATGTAGAGAGGATTGAAACAGGCCGTCTTCCTGTGAGTAGCTCAAGCAGGACCACTCCAAAACTGTACACATCGCCTCTTAAGGTAGCAACCCATCCTTGTCCATACTCAGGTGGGATGTAACCTAGAGTGCCGACTAGCTCTGTTGTGATGTGGTTTTTGTTCGGAAGGATCAATCTTGACAACCCAAAATCAGCGACATAAGCTTTGAATTCTTTGTCAAGTAGAATGTTGCTGGACTTGATGTCACGGTGGACAATGTGAGGCTTGCAAACATCATGGA]
[+] EMBL CB629811             [                          CAATTGAGCGTACTCACCTTTTCCTTCCCCGGAGGAGAAATGTCTGGTTATGAAACTAAAAACTCCTGAGAAGATACAAAAGTGCAAACCCCTAATATGTCAGCAGCTGTACACAACATGTTACAAGACCAGAAAAACTACTACTACGTAATACCACATTTGCTCTATGCACTGAGCTACAATTTTGTCATTGTATAACTGCAATCTACCTTGACTGCCTTGTGCCTTCTATATCTTCAGTCGGAGCCTACACTGTCCAGGCAGGAAACTACCTCTGTGATAGTTGGCCGCATGCAAGGATTACAGTTGACACATTTGCAAGCAACTTCAAGCACCTTGAGCATCTGTTCTTCATTCCCTGTGCCTTGGAGTGTTGGATCCAGGACCTCAAGCATGTTTCCCTTGGACTTCATTTCTAGCACCCATTGAACAAGTTCCTCTGATGTAGAGAGGATTGAAACAGGCCGTCTTCCTGTGAGTAGCTCAAGCAGGACCACTCCAAAACTGTACACATCGCCTCTTAAGGTAGCAACCCATCCTTGTCCATACTCAGGTGGGATGTAACCTAGAGTGCCGACTAGCTCTGTTGTGATGTGGTTTTTGTTCGGAAGGATCAATCTTGACAACCCAAAATCAGCGACATAAGCTTTGAATTCTTTGTCAAGTAGAATGTTGC                                                ]


>consensus_3689#0 TCCTTTTTTTTCCTCATGCTTTTCGCCAATTGAGCGTACTCACCACTTCCTTCAGTGGAG GAGAAATGTCTGGTTATGAAACTAAAAACTCCTGAGAAGATACAAAAGTGCAAAATGGTA ATATGTCAGCAGCTGTACACAACATGTTACAAGACCAGAAAAACTACTACTACGTAATAC CACATTTGCTCTATGCACTGAGCTACAATTTTGTCATTGTATAACTGCAATCTACCTTGA CTGCCTTGTGCCTTCTATATCTTCAGTCGGAGCCTACACTGTCCAGGCAGGAAACTACCT CTGTGATAGTTGGCCGCATGCAAGGATTACAGTTGACACATTTGCAAGCAACTTCAAGCA CCTTGAGCATCTGTTCTTCATTCCCTGTGCCTTGGAGTGTTGGATCCAGGACCTCAAGCA TGTTTCCCTTGGACTTCATTTCTAGCACCCATTGAACAAGTTCCTCTGATGTAGAGAGGA TTGAAACAGGCCGTCTTCCTGTGAGTAGCTCAAGCAGGACCACTCCAAAACTGTACACAT CGCCTCTTAAGGTAGCAACCCATCCTTGTCCATACTCAGGTGGGATGTAACCTAGAGTGC CGACTAGCTCTGTTGTGATGTGGTTTTTGTTCGGAAGGATCAATCTTGACAACCCAAAAT CAGCGACATAAGCTTTGAATTCTTTGTCAAGTAGAATGTTGCTGGACTTGATGTCACGGT GGACAATGTGAGGCTTGCAAACATCATGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)