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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3725 cluster # 3725       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3725#0 length = 1238 sequences # 2  

consensusID : consensus_3725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1238
fasta sequence
                              [ATTAGGCCACGCTTCCAAGCTGCAACATGTTGACATATCAAGTAATAACTTCACTGGGGTCATACCTGGCACTATTGGGAAACTTACAGAACTATATCGGCTAAATCTTGAAAAAAATCAACTCCATGCACGCAACAAGCAAGACTGGGAGTTCATGAGCAGCTTAGCAAACTGCACCGGTTTGACACTTCTCTCAATATCTGATAACTGTCTAGAAGGCCATGTACCAAGTTCATTAGGTAACCTTTCTGTTCAGCTTCACCAACTGCTTTTGGGAGGAAATCAATTATCAGGGGGTTTTCCTCCTGGTTTCCAATACCTTCGCAACCTGATTAGCATATCAATCGATAGCAATAGTTTTTCAGGAGTCCTTCCAGAATGGCTTGGCACTCTACAAAATTTGCAATTAATAGGCTTATATAACAATAACTTTACAGGGATTATACCTTCATCCCTTTCAAATTTATCTCAATTAGGATATCTCTATCTACAGTCAAATCAGTTTTATGGGCATCTACCACCAAGCTTGGGAAATCACAAAATGCTTCAAGAATTGATTATTGGATATAACAATATTCAGGGTGTGATACCAAAGGAGATATTCAAAATTCCATCATTGCTTCAAATTGATTTATCTTTCAACAACCTAGATGGAAGTATCCCAAAAGAAGTAGGTGATGCCAAGCAACTCATGTATTTGAGGCTTTCGTCTAATAAGCTATCTGGGGATATTCCTAACTCTTTANGTAATTCTGAAAGCTTGGATATAATAAATG-TGGATCGGAATATATTTAGTGGAAGCATCCCCACTTCATTAGACAACATACTCAGCCTAAAAGTTCTGAACTTGTCTCAGAACAACTTGTCAGGATCTATACCACCATCTCTTGGCAACCTCCAATTTCTTGAGAAGCTAGATCTTTCATTCAACCATCTTAAAGGTGAGGTCCCAGTAAAAGGAATATTCAAGAATGCAAGTGCCATTCGAATTGATGGTAACGAGGCCCTTTGTGGTGGAGTGCCAGAGCTACATTTACATGCATGCTCTATCATCCCTTTTGATTCAACTAAGCACAAGCAATCTATTGTACTAAAAATCGTCATCCCATTAGCTAGCGTGTTGTCACTTGCTATGATCATATCTATCTTGTTACTTCTGAACAGAAAACAGAAGAGAAAATCTGTAGATTTACCCTCATTTGGTAGGAAATTTGTCAGAGTTTCCTACAATGATCTTG]

[+] EMBL CB635883             [ATTAGGCCACGCTTCCAAGCTGCAACATGTTGACATATCAAGTAATAACTTCACTGGGGTCATACCTGGCACTATTGGGAAACTTACAGAACTATATCGGCTAAATCTTGAAAAAAATCAACTCCATGCACGCAACAAGCAAGACTGGGAGTTCATGAGCAGCTTAGCAAACTGCACCGGTTTGACACTTCTCTCAATATCTGATAACTGTCTAGAAGGCCATGTACCAAGTTCATTAGGTAACCTTTCTGTTCAGCTTCACCAACTGCTTTTGGGAGGAAATCAATTATCAGGGGGTTTTCCTCCTGGTTTCCAATACCTTCGCAACCTGATTAGCATATCAATCGATAGCAATAGTTTTTCAGGAGTCCTTCCAGAATGGCTTGGCACTCTACAAAATTTGCAATTAATAGGCTTATATAACAATAACTTTACAGGGATTATACCTTCATCCCTTTCAAATTTATCTCAATTAGGATATCTCTATCTACAGTCAAATCAGTTTTATGGGCATCTACCACCAAGCTTGGGAAATCACAAAATGCTTCAAGAATTGATTATTGGATATAACAATATTCAGGGTGTGATACCAAAGGAGATATTCAAAATTCCATCATTGCTTCAAATTGATTTATCTTTCAACAACCTAGATGGAAGTATCCCAAAAGAAGTAGGTGATGCCAAGCAACTCATGTATTTGAGGCTTTCGTCTAATAAGCTATCTGGGGATATTCCTAACTCTTTANGTAATTCTGAAAGCTTGGATATAATAAATG TGGATCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB631113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cAATCTATCAAAATTAGGATATCTCTATCTACAGTCAAATCAGTTTTATGGGCATCTACCACCAAGCTTGGGAAATCACAAAATGCTTCAAGAATTGATTATTGGATATAACAATATTCAGGGTGTGATACCAAAGGAGATATTCAAAATTCCATCATTGCTTCAAATTGATTTATCTTTCAACAACCTAGATGGAAGTATCCCAAAAGAAGTAGGTGATGCCAAGCAACTCATGTATTTGAGGCTTTCGTCTAATAAGCTATCTGGGGATATTCCTAACTCTTTAGGTAATTCTGAAAGCTTGGATATAAT AATGTTGGATCGGAATATATTTAGTGGAAGCATCCCCACTTCATTAGACAACATACTCAGCCTAAAAGTTCTGAACTTGTCTCAGAACAACTTGTCAGGATCTATACCACCATCTCTTGGCAACCTCCAATTTCTTGAGAAGCTAGATCTTTCATTCAACCATCTTAAAGGTGAGGTCCCAGTAAAAGGAATATTCAAGAATGCAAGTGCCATTCGAATTGATGGTAACGAGGCCCTTTGTGGTGGAGTGCCAGAGCTACATTTACATGCATGCTCTATCATCCCTTTTGATTCAACTAAGCACAAGCAATCTATTGTACTAAAAATCGTCATCCCATTAGCTAGCGTGTTGTCACTTGCTATGATCATATCTATCTTGTTACTTCTGAACAGAAAACAGAAGAGAAAATCTGTAGATTTACCCTCATTTGGTAGGAAATTTGTCAGAGTTTCCTACAATGATCTTG]


>consensus_3725#0 ATTAGGCCACGCTTCCAAGCTGCAACATGTTGACATATCAAGTAATAACTTCACTGGGGT CATACCTGGCACTATTGGGAAACTTACAGAACTATATCGGCTAAATCTTGAAAAAAATCA ACTCCATGCACGCAACAAGCAAGACTGGGAGTTCATGAGCAGCTTAGCAAACTGCACCGG TTTGACACTTCTCTCAATATCTGATAACTGTCTAGAAGGCCATGTACCAAGTTCATTAGG TAACCTTTCTGTTCAGCTTCACCAACTGCTTTTGGGAGGAAATCAATTATCAGGGGGTTT TCCTCCTGGTTTCCAATACCTTCGCAACCTGATTAGCATATCAATCGATAGCAATAGTTT TTCAGGAGTCCTTCCAGAATGGCTTGGCACTCTACAAAATTTGCAATTAATAGGCTTATA TAACAATAACTTTACAGGGATTATACCTTCATCCCTTTCAAATTTATCTCAATTAGGATA TCTCTATCTACAGTCAAATCAGTTTTATGGGCATCTACCACCAAGCTTGGGAAATCACAA AATGCTTCAAGAATTGATTATTGGATATAACAATATTCAGGGTGTGATACCAAAGGAGAT ATTCAAAATTCCATCATTGCTTCAAATTGATTTATCTTTCAACAACCTAGATGGAAGTAT CCCAAAAGAAGTAGGTGATGCCAAGCAACTCATGTATTTGAGGCTTTCGTCTAATAAGCT ATCTGGGGATATTCCTAACTCTTTANGTAATTCTGAAAGCTTGGATATAATAAATGTGGA TCGGAATATATTTAGTGGAAGCATCCCCACTTCATTAGACAACATACTCAGCCTAAAAGT TCTGAACTTGTCTCAGAACAACTTGTCAGGATCTATACCACCATCTCTTGGCAACCTCCA ATTTCTTGAGAAGCTAGATCTTTCATTCAACCATCTTAAAGGTGAGGTCCCAGTAAAAGG AATATTCAAGAATGCAAGTGCCATTCGAATTGATGGTAACGAGGCCCTTTGTGGTGGAGT GCCAGAGCTACATTTACATGCATGCTCTATCATCCCTTTTGATTCAACTAAGCACAAGCA ATCTATTGTACTAAAAATCGTCATCCCATTAGCTAGCGTGTTGTCACTTGCTATGATCAT ATCTATCTTGTTACTTCTGAACAGAAAACAGAAGAGAAAATCTGTAGATTTACCCTCATT TGGTAGGAAATTTGTCAGAGTTTCCTACAATGATCTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)