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Oryza sativa
cluster # 3770 cluster # 3770       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3770#0 length = 1272 sequences # 2  

consensusID : consensus_3770#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1272
fasta sequence
                              [CCCTCGCGAATCTGAGATCCCCAAGAATTCCTTCTCGAAAACCCTAGAGGAGAGCGAGAGAGAAGAGGAGGCGGCGGCGGCGGCGGCGGAAGCACATGGCGATCATCTCCGACTTCCAGGAGGAAGAGGCTCCGCCGCGGCAGCAGCAGCAACCGGCTTCGGTGGCGGCGGCGGCGGGGAGCGGCGACGAGGTCCTCGCGGCGGAGCTGGAGCGGAGGGGCGGCGCGATCCCCTTCCTCCAGGCGGCAATCGACGTGGCGAGGCGGCGGTCCGACCTGTTCCGCGACCCCTCCGCGGTGAGCAGGGTCACATCGATGGCGTCGGCGGCGAGGGCGGTGGTGGAGGCGGAGGAGAGGAAGGCGAGGGAGGCCAAGAGGAAGGCGGAGGAGGCGGAGAGGAAGGCGGCCGAGGCCGAGAGGAAGGCGAAGGCGCCCGCGGAGCCGAAGCCGGAGAGCTCGGCGGGGAAGGATAGCATGGAGGTGGACAAGAAGGAGGAGGGCAACGTGAGGAAACCAAATGCTGGCAATGGTCTTGATTTGGAGAAGTACTCTTGGATTCAGCAATTGCCAGAGGTTACCATCACCGTACCTGTTCCTCAAGGAACGAAGTCAAGGTTTGTCGTCTGTGATATTAAGAAGACCATCTGAAGGTTGGGCTGAAGGGCCAGCCTCCTATCATTGATGGTGAGCTTTTCAAACCAGTCAAAGTTGATGACTGCTTCTGGAGCATAGAGGATGGAAAATCGCTGTCCATTTTGCTGACAAAGCAAAATCAAATGGAGTGGTGGAAATCCGTAGTGAAGGGTGACCCTGAAGTTGATACACAGAAGGTGGAACCGGAGAACAGCAAACTCGCTGATTTGGATCCAGAGACTCGACAAACTGTGGAGAAGATGATGTTTGATCAACGCCAGAAGCAGATGGGTCTTCCAACAAGTGATGAAATGCAGAAGCAAGACATGCTCAAGAAATTCATGGCTCAGCACCCGGAGATGGACTTCTCCAATGCAAAAATAGCTTAGAACTTATAAATCGAGAGTGACCAGCAGTATGGAGAAGGTTGGAGATGCTGAATGGAGAACTACATTTCATCTCGTTCTTAGTGTCTGTCGATGGATGGTTTACGGGTAGTGTCTGTCGATGGATGGTTTACGGGTTTAGCCGTGAGGTGATTGGCCTCACGTCATTTTGTGAATTTTGTGTTCTTCAGAAACGTGAATCCGT-GCTGTTTCCTGAACCTTTGAATGGATAGTAAAATCAGTTGCACCCCAAA]

[+] EMBL AK073934             [CCCTCGCGAATCTGAGATCCCCAAGAATTCCTTCTCGAAAACCCTAGAGGAGAGCGAGAGAGAAGAGGAGGCGGCGGCGGCGGCGGCGGAAGCACATGGCGATCATCTCCGACTTCCAGGAGGAAGAGGCTCCGCCGCGGCAGCAGCAGCAACCGGCTTCGGTGGCGGCGGCGGCGGGGAGCGGCGACGAGGTCCTCGCGGCGGAGCTGGAGCGGAGGGGCGGCGCGATCCCCTTCCTCCAGGCGGCAATCGACGTGGCGAGGCGGCGGTCCGACCTGTTCCGCGACCCCTCCGCGGTGAGCAGGGTCACATCGATGGCGTCGGCGGCGAGGGCGGTGGTGGAGGCGGAGGAGAGGAAGGCGAGGGAGGCCAAGAGGAAGGCGGAGGAGGCGGAGAGGAAGGCGGCCGAGGCCGAGAGGAAGGCGAAGGCGCCCGCGGAGCCGAAGCCGGAGAGCTCGGCGGGGAAGGATAGCATGGAGGTGGACAAGAAGGAGGAGGGCAACGTGAGGAAACCAAATGCTGGCAATGGTCTTGATTTGGAGAAGTACTCTTGGATTCAGCAATTGCCAGAGGTTACCATCACCGTACCTGTTCCTCAAGGAACGAAGTCAAGGTTTGTCGTCTGTGATATTAAGAAGACCATCTGAAGGTTGGGCTGAAGGGCCAGCCTCCTATCATTGATGGTGAGCTTTTCAAACCAGTCAAAGTTGATGACTGCTTCTGGAGCATAGAGGATGGAAAATCGCTGTCCATTTTGCTGACAAAGCAAAATCAAATGGAGTGGTGGAAATCCGTAGTGAAGGGTGACCCTGAAGTTGATACACAGAAGGTGGAACCGGAGAACAGCAAACTCGCTGATTTGGATCCAGAGACTCGACAAACTGTGGAGAAGATGATGTTTGATCAACGCCAGAAGCAGATGGGTCTTCCAACAAGTGATGAAATGCAGAAGCAAGACATGCTCAAGAAATTCATGGCTCAGCACCCGGAGATGGACTTCTCCAATGCAAAAATAGCTTAGAACTTATAAATCGAGAGTGACCAGCAGTATGGAGAAGGTTGGAGATGCTGAATGGAGAACTACATTTCATCTCGTTCTTAGTGTCTGTCGATGGATGGTTTACGGGTAGTGTCTGTCGATGGATGGTTTACGGGTTTAGCCGTGAGGTGATTGGCCTCACGTCATTTTGTGAATTTTGTGTTCTTCAGAAACGTGAATCCGT GCTGTTTCCTGAACCTTTGAATGGATAGTAAAATCAGTTG         ]
[+] EMBL BI800054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAAATCGAGAGTGACCAGCAGTATGGAGAAGGTTGGAGATGCTGAATGGAGAACTACATTTCATCTCGTTCTTAGTGTCTGTCGATGGATGGTTTACGGGTAGTGTCTGTCGATGGATGGTTTACGGGTTTAGCCGTGAGGTGATTGGCCTCACGTCATTTTGTGAATTTTGTGTTCTTCAGAAACGTGAATCCGTCGCTGTTTCCTGAACCTTTGAATGGATAGTAAAATCAGTTGCACCCCAAA]


>consensus_3770#0 CCCTCGCGAATCTGAGATCCCCAAGAATTCCTTCTCGAAAACCCTAGAGGAGAGCGAGAG AGAAGAGGAGGCGGCGGCGGCGGCGGCGGAAGCACATGGCGATCATCTCCGACTTCCAGG AGGAAGAGGCTCCGCCGCGGCAGCAGCAGCAACCGGCTTCGGTGGCGGCGGCGGCGGGGA GCGGCGACGAGGTCCTCGCGGCGGAGCTGGAGCGGAGGGGCGGCGCGATCCCCTTCCTCC AGGCGGCAATCGACGTGGCGAGGCGGCGGTCCGACCTGTTCCGCGACCCCTCCGCGGTGA GCAGGGTCACATCGATGGCGTCGGCGGCGAGGGCGGTGGTGGAGGCGGAGGAGAGGAAGG CGAGGGAGGCCAAGAGGAAGGCGGAGGAGGCGGAGAGGAAGGCGGCCGAGGCCGAGAGGA AGGCGAAGGCGCCCGCGGAGCCGAAGCCGGAGAGCTCGGCGGGGAAGGATAGCATGGAGG TGGACAAGAAGGAGGAGGGCAACGTGAGGAAACCAAATGCTGGCAATGGTCTTGATTTGG AGAAGTACTCTTGGATTCAGCAATTGCCAGAGGTTACCATCACCGTACCTGTTCCTCAAG GAACGAAGTCAAGGTTTGTCGTCTGTGATATTAAGAAGACCATCTGAAGGTTGGGCTGAA GGGCCAGCCTCCTATCATTGATGGTGAGCTTTTCAAACCAGTCAAAGTTGATGACTGCTT CTGGAGCATAGAGGATGGAAAATCGCTGTCCATTTTGCTGACAAAGCAAAATCAAATGGA GTGGTGGAAATCCGTAGTGAAGGGTGACCCTGAAGTTGATACACAGAAGGTGGAACCGGA GAACAGCAAACTCGCTGATTTGGATCCAGAGACTCGACAAACTGTGGAGAAGATGATGTT TGATCAACGCCAGAAGCAGATGGGTCTTCCAACAAGTGATGAAATGCAGAAGCAAGACAT GCTCAAGAAATTCATGGCTCAGCACCCGGAGATGGACTTCTCCAATGCAAAAATAGCTTA GAACTTATAAATCGAGAGTGACCAGCAGTATGGAGAAGGTTGGAGATGCTGAATGGAGAA CTACATTTCATCTCGTTCTTAGTGTCTGTCGATGGATGGTTTACGGGTAGTGTCTGTCGA TGGATGGTTTACGGGTTTAGCCGTGAGGTGATTGGCCTCACGTCATTTTGTGAATTTTGT GTTCTTCAGAAACGTGAATCCGTGCTGTTTCCTGAACCTTTGAATGGATAGTAAAATCAG TTGCACCCCAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)