cluster # 378

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Oryza sativa
cluster # 378 cluster # 378 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_378#0 length = 1850 sequences # 2
consensusID : consensus_378#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1850
fasta sequence
                              [ATCCCCCTCCCATTTCCCGCCTTCCCCAATTTCTCCCAAACCCTAGCTAGCCTTTCCCCAACCTAGACTCCTTGACGCGGCGAGGAGGAGGAGGCGGCGATGCGGGGCGGCACGGTGCAGATCAACTGGCACGAGCAGCAGCCGGTCCTCACCCTCGACTTCCACCCCGTCTCCCGCCGCCTCGCCACCGGCGGCAGCGACCACGACATCAAGATCTGGGTGATTGCGTCGGATGATTCCGACAAGAAGCTCCCCACTGCCACCTACCACAGCAGCCTCTCCTCCCACAGCTCCGCGGTGGACGTTCTCCGCTTCTCGCCTTCCGGCGAAAATCTTGCGTCTGGTGCTGATGGTGGTGGTATTATCATCTGGAAGTTGCATTCCACTGATGACGGCGAGGCTTGGAAAGTACAAAAGACATTATTGTTCCATCACAAGGATGTTCTTGACCTGCAATGGTCCCAAGATGGCGCATTCCTTGTTTCTGCTTCAGTTGATAACAGTTGCATTGTATGGGATGCTATTAAAGGTTCGGTGCAACAAAAGTTGGAGGGTCATTTGCATTATGTTCAAGGCGTGGCATGGGATCCTCTGGGTCAATACATTGCTTCACTGAGCTCTGACAGAACTTGTAGAATATATGCAAATAAGCCCCAAGGCAAGTCAAAGAACACAGATAGGATGAACTTTGTTTGCCAGCATACACTGGTGAAGGCCGAACATCAAAATCATGATGAGTCCAAGCCACCAGTTAGAGCTCATTTGTTTCATGACGAAACGTTACCATCTTTCTTTCGGAGATTGGCATGGTCGCCTGATGGATCTTTTCTGGTACTGCCAGCAGGTTTATGCAAATATTCATCTGAAGTGATCAATACAGCTTATGTAATGTCAAGGAGAGACTTGTCAAGGCCTGCGATACAACTCCCTGGCGCAAGTAAAGCAATAGTGGCAGTGCGCTTTTGCCCGGTTCTCTTCAAGCTGCGTGGTTCCCAATCAGATTGTTTCTTCAAGCTTCCTTACAGAGTTATTTTTGCTGTTGCTACTTTGAACTCCCTGTATGTTTATGACACTGAAAGTGTTGCTCCTATTCTAATACATGCTGGTCTGCACTATGCTGCAATTACGGATATTGCATGGTCTTCTGATGCCAAGTACCTGGCAGTGTCATCACGAGATTGCTTCTGCACCATTATTGAGTTTGAGAATGAAGAGTTGGGGCTGCCCTATAATCTCTCTGGAACAAAGGAACTTGATGAAGGGAATACCAACTGTGAGAACATGAAGCCATTAAAGGTGGACAGTATGGAAATTGATGCTGGTTCCAGCAAAGCTAAGATAAAAGCCAGTTCTGCAGCCGTTGAAGTGACACCATCACCACCAGTGCTGGCCCAGAACAATATATTGATGACAAAGGACGTTGCTGAAGGAAATGCGACAAGTGAAAATGACAGGCCTTCAGCGGTGGACAATATGGAAGTTGATGTTGGTGAAAACAAAGCTAAGATGGAAGTCACTCCTGTCGCTGTACAAGTGACAGCGCCGCCAGTGTCGACCAAGAACAGCGCATCAAGTAAGCCTACCAAGAAGCGAATTACTCCTATTGCAATCAACTAAGTAATGCAAAGTAATTAGGACCTAGGATTATGATATCTTCTGTAGTGATAGCAAGTACAAGAATTTACATTTAGGTCACCCTGTAAAGAAATTTATTTTGCAACGCGTGTTCAACTTGTGGCCTAACCCCAGAAACTCCGGTTCTGCTAATGGCACATAGTGGAAGCAGTTATATGGACACAGCTTGTGTCAGTGAGCACATTTGGTTATAAATCAACTTGCAGATACCAGAT]

[+] EMBL AK121823             [ATCCCCCTCCCATTTCCCGCCTTCCCCAATTTCTCCCAAACCCTAGCTAGCCTTTCCCCAACCTAGACTCCTTGACGCGGCGAGGAGGAGGAGGCGGCGATGCGGGGCGGCACGGTGCAGATCAACTGGCACGAGCAGCAGCCGGTCCTCACCCTCGACTTCCACCCCGTCTCCCGCCGCCTCGCCACCGGCGGCAGCGACCACGACATCAAGATCTGGGTGATTGCGTCGGATGATTCCGACAAGAAGCTCCCCACTGCCACCTACCACAGCAGCCTCTCCTCCCACAGCTCCGCGGTGGACGTTCTCCGCTTCTCGCCTTCCGGCGAAAATCTTGCGTCTGGTGCTGATGGTGGTGGTATTATCATCTGGAAGTTGCATTCCACTGATGACGGCGAGGCTTGGAAAGTACAAAAGACATTATTGTTCCATCACAAGGATGTTCTTGACCTGCAATGGTCCCAAGATGGCGCATTCCTTGTTTCTGCTTCAGTTGATAACAGTTGCATTGTATGGGATGCTATTAAAGGTTCGGTGCAACAAAAGTTGGAGGGTCATTTGCATTATGTTCAAGGCGTGGCATGGGATCCTCTGGGTCAATACATTGCTTCACTGAGCTCTGACAGAACTTGTAGAATATATGCAAATAAGCCCCAAGGCAAGTCAAAGAACACAGATAGGATGAACTTTGTTTGCCAGCATACACTGGTGAAGGCCGAACATCAAAATCATGATGAGTCCAAGCCACCAGTTAGAGCTCATTTGTTTCATGACGAAACGTTACCATCTTTCTTTCGGAGATTGGCATGGTCGCCTGATGGATCTTTTCTGGTACTGCCAGCAGGTTTATGCAAATATTCATCTGAAGTGATCAATACAGCTTATGTAATGTCAAGGAGAGACTTGTCAAGGCCTGCGATACAACTCCCTGGCGCAAGTAAAGCAATAGTGGCAGTGCGCTTTTGCCCGGTTCTCTTCAAGCTGCGTGGTTCCCAATCAGATTGTTTCTTCAAGCTTCCTTACAGAGTTATTTTTGCTGTTGCTACTTTGAACTCCCTGTATGTTTATGACACTGAAAGTGTTGCTCCTATTCTAATACATGCTGGTCTGCACTATGCTGCAATTACGGATATTGCATGGTCTTCTGATGCCAAGTACCTGGCAGTGTCATCACGAGATTGCTTCTGCACCATTATTGAGTTTGAGAATGAAGAGTTGGGGCTGCCCTATAATCTCTCTGGAACAAAGGAACTTGATGAAGGGAATACCAACTGTGAGAACATGAAGCCATTAAAGGTGGACAGTATGGAAATTGATGCTGGTTCCAGCAAAGCTAAGATAAAAGCCAGTTCTGCAGCCGTTGAAGTGACACCATCACCACCAGTGCTGGCCCAGAACAATATATTGATGACAAAGGACGTTGCTGAAGGAAATGCGACAAGTGAAAATGACAGGCCTTCAGCGGTGGACAATATGGAAGTTGATGTTGGTGAAAACAAAGCTAAGATGGAAGTCACTCCTGTCGCTGTACAAGTGACAGCGCCGCCAGTGTCGACCAAGAACAGCGCATCAAGTAAGCCTACCAAGAAGCGAATTACTCCTATTGCAATCAACTAAGTAATGCAAAGTAATTAGGACCTAGGATTATGATATCTTCTGTAGTGATAGCAAGTACAAGAATTTACATTTAGGTCACCCTGTAAAGAAATTTATTTTGCAACGCGTGTTCAACTTGTGGCCTAACCCCAGAAACTCCGGTTCTGCTAATGGCACATAGTGGAAGCAGTTATATGGACACAGCTTGTGTCAGTGAGCACATTTGGTTATAAATCAACTTGCAGATACCAGAT]
[-] EMBL CA760899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gcccgcccATTCGTTCTGCCCCACTCTTGAGTCTCAAAACACACAGTCCGGCCTCCCCTATCATGTGTGTGGAACAAAGGATCTTCATCAAGGCAATCTCATCTGTCACAACATTGACCCCTTAAAGGTGCCCAGTATGCAAATTGATCCTGGTTCCAGCAAAGCTAAGATAAAAGCCAGTTCTGCAGCCGTTGAAGTCACACCATCACCACCAGTGCTGGCCCAGACCAATATATTGATGACAAAGGACGTTGCTGAAGGAAATGCGCCAAGTGAAAATGACAGGCCTTCAGCGGTGGACAATATGGAAGTTGATGTTGGTGAAAACAAAGCTAAGATGGAAGTCACTCCTGTCGCTGTACAAGTGACAGCGCCGCCAGTGTCGACCAAGAACAGCGCATCAAGTAAGCCTACCAAGAAGCGAATTACTCCTATTGCAATCAACTAAGTAATGCAAAGTAATTAGGACCTAGGATTATGATATCTTCTGTAGTGATAGCAAGTACAAGAATTTACATTTAGGTCACCCTGTAAAGAAATTTATTTTGCAACGCGTGTTCACCTTGTGGCCTAACCCCAGAAACTCCGGTTCTGCTAATGGCACATAGTGGAAGCAGTTATATGGACACAGCTTGTGTCAGTGAGCACATTTGGTTATAAAaaaaaaaa            ]




>consensus_378#0
ATCCCCCTCCCATTTCCCGCCTTCCCCAATTTCTCCCAAACCCTAGCTAGCCTTTCCCCA
ACCTAGACTCCTTGACGCGGCGAGGAGGAGGAGGCGGCGATGCGGGGCGGCACGGTGCAG
ATCAACTGGCACGAGCAGCAGCCGGTCCTCACCCTCGACTTCCACCCCGTCTCCCGCCGC
CTCGCCACCGGCGGCAGCGACCACGACATCAAGATCTGGGTGATTGCGTCGGATGATTCC
GACAAGAAGCTCCCCACTGCCACCTACCACAGCAGCCTCTCCTCCCACAGCTCCGCGGTG
GACGTTCTCCGCTTCTCGCCTTCCGGCGAAAATCTTGCGTCTGGTGCTGATGGTGGTGGT
ATTATCATCTGGAAGTTGCATTCCACTGATGACGGCGAGGCTTGGAAAGTACAAAAGACA
TTATTGTTCCATCACAAGGATGTTCTTGACCTGCAATGGTCCCAAGATGGCGCATTCCTT
GTTTCTGCTTCAGTTGATAACAGTTGCATTGTATGGGATGCTATTAAAGGTTCGGTGCAA
CAAAAGTTGGAGGGTCATTTGCATTATGTTCAAGGCGTGGCATGGGATCCTCTGGGTCAA
TACATTGCTTCACTGAGCTCTGACAGAACTTGTAGAATATATGCAAATAAGCCCCAAGGC
AAGTCAAAGAACACAGATAGGATGAACTTTGTTTGCCAGCATACACTGGTGAAGGCCGAA
CATCAAAATCATGATGAGTCCAAGCCACCAGTTAGAGCTCATTTGTTTCATGACGAAACG
TTACCATCTTTCTTTCGGAGATTGGCATGGTCGCCTGATGGATCTTTTCTGGTACTGCCA
GCAGGTTTATGCAAATATTCATCTGAAGTGATCAATACAGCTTATGTAATGTCAAGGAGA
GACTTGTCAAGGCCTGCGATACAACTCCCTGGCGCAAGTAAAGCAATAGTGGCAGTGCGC
TTTTGCCCGGTTCTCTTCAAGCTGCGTGGTTCCCAATCAGATTGTTTCTTCAAGCTTCCT
TACAGAGTTATTTTTGCTGTTGCTACTTTGAACTCCCTGTATGTTTATGACACTGAAAGT
GTTGCTCCTATTCTAATACATGCTGGTCTGCACTATGCTGCAATTACGGATATTGCATGG
TCTTCTGATGCCAAGTACCTGGCAGTGTCATCACGAGATTGCTTCTGCACCATTATTGAG
TTTGAGAATGAAGAGTTGGGGCTGCCCTATAATCTCTCTGGAACAAAGGAACTTGATGAA
GGGAATACCAACTGTGAGAACATGAAGCCATTAAAGGTGGACAGTATGGAAATTGATGCT
GGTTCCAGCAAAGCTAAGATAAAAGCCAGTTCTGCAGCCGTTGAAGTGACACCATCACCA
CCAGTGCTGGCCCAGAACAATATATTGATGACAAAGGACGTTGCTGAAGGAAATGCGACA
AGTGAAAATGACAGGCCTTCAGCGGTGGACAATATGGAAGTTGATGTTGGTGAAAACAAA
GCTAAGATGGAAGTCACTCCTGTCGCTGTACAAGTGACAGCGCCGCCAGTGTCGACCAAG
AACAGCGCATCAAGTAAGCCTACCAAGAAGCGAATTACTCCTATTGCAATCAACTAAGTA
ATGCAAAGTAATTAGGACCTAGGATTATGATATCTTCTGTAGTGATAGCAAGTACAAGAA
TTTACATTTAGGTCACCCTGTAAAGAAATTTATTTTGCAACGCGTGTTCAACTTGTGGCC
TAACCCCAGAAACTCCGGTTCTGCTAATGGCACATAGTGGAAGCAGTTATATGGACACAG
CTTGTGTCAGTGAGCACATTTGGTTATAAATCAACTTGCAGATACCAGAT
clustalw multiple alignements is not computed in this case