cluster # 3842

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Oryza sativa
cluster # 3842 cluster # 3842 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3842#0 length = 842 sequences # 2

consensusID : consensus_3842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 842
fasta sequence

                              [TCCTTTTTTTTTTTTACACACACATTTGCGTTTATTATACATAAAAAAGAATAATTACACGTTATACACAGTTCACCGCTGAAGAGAAAAGCACGAAGGGTAATAATATGATACCATTTCGACAGTTGTTAGTACCTAGAGTTCAATTTTACAAAACTGTACGCTCAAATCTCAAGCTGAACTCTGCAGAACCAGCTCAAACTGTACGCTTTGCAACGAAGCCTCCAAGCAGTCCACATTTGCTGCGACATTCTCATGTAGCAGCCATATCTACTTGAAATCTTGAATCAACACCATAAATCCCGTAAGCTGTCTGATCTTGCAGCATGATTGGTCCTATTCCGTATACTTCATCACATATCTGCTGGTTATAACATCTACTTCAACTCTTCAGTATATCATGTTCAGAAACACATGATCATATTCAACAAAATTACATCAGTAGAGAAATCCTTACAGTGCATCCTTTTCCATTATGATTGATTGGGTTGCTGACCGCAGAAACCGCAGTTTGAGCGGAATTTCCGCACCTCCCGTGAAACTGCTATAGAATCTCTGGGCCTTCAGGAATCAACTCATAACCATGGGGTTTAGTATTTGTCTTATTAAATTCAACTGGAATGCACTTGAGGATAACAGAGATGATCATACTAATTGAGCCAATGACGACGCTGAGCAGCCACAGCTCCCCGCTCAATGGTACAGTGTTTGCAAAAGTGCCAAGAAATTCTACTATGATCACTTGGAATATGACAGTAGCTGTCAATATACCAACAAAGATCCAGTTTCTGAAGATACCTTGGAGGACATTGATCTTTTCCATCTCCCTACAATTTATTTCA]

[+] EMBL CB634259             [TCCTTTTTTTTTTTTACACACACATTTGCGTTTATTATACATAAAAAAGAATAATTACACGTTATACACAGTTCACCGCTGAAGAGAAAAGCACGAAGGGTAATAATATGATACCATTTCGACAGTTGTTAGTACCTAGAGTTCAATTTTACAAAACTGTACGCTCAAATCTCAAGCTGAACTCTGCAGAACCAGCTCAAACTGTACGCTTTGCAACGAAGCCTCCAAGCAGTCCACATTTGCTGCGACATTCTCATGTAGCAGCCATATCTACTTGAAATCTTGAATCAACACCATAAATCCCGTAAGCTGTCTGATCTTGCAGCATGATTGGTCCTATTCCGTATACTTCATCACATATCTGCTGGTTATAACATCTACTTCAACTCTTCAGTATATCATGTTCAGAAACACATGATCATATTCAACAAAATTACATCAGTAGAGAAATCCTTACAGTGCATCCTTTTCCATTATGATTGATTGGGTTGCTGACCGCAGAAACCGCAGTTTGAGCGGAATTTCCGCACCTCCCGTGAAACTGCTATAGAATCTCTGGGCCTTCAGGAATCAACTCATAACCATGGGGTTTAGTATTTGTCTTATTAAATTCAACTGGAATGCACTTGAGGATAACAGAGATGATCATACTAATTGAGCCAATGACGACGCTGAGCAGCCACAGCTCCCCGCTCAATGGTACAGTGTTTGCAAAAGTGCCAAGAAATTCTACTATGATCACTTGGAATATGACAGTAGCTGTCAATATACCAACAAAGAT                                                             ]
[+] EMBL CB645225             [                                                                                                        AATATGATACCATTTCGACAGTTGTTAGTACCTAGAGTTCAATTTTACAAAACTGTACGCTCAAATCTCAAGCTGAACTCTGCAGAACCAGCTCAAACTGTACGCTTTGCAACGAAGCCTCCAAGCAGTCCACATTTGCTGCGACATTCTCATGTAGCAGCCATATCTACTTGAAATCTTGAATCAACACCATAAATCCCGTAGGCTGTCTGATCTTGCAGCATGATTGGTCCTATTCCGTATACTTCATCACATATCTGCTGGTTATAACATCTACTTCAACTCTTCAGTATATCATGTTCAGAAACACATGATCATATTCAACAAAATTACATCAGTAGAGAAATCCTTACAGTGCATCCTTTTCCATTATGATTGATTGGGTTGCTGACCGCAAAAACCGCAGTTTGAGCGGAATTTCCGCACCTCCCGTGAAACTGCTATAGAATCTCTGGGCCTTCAGGAATCAACTCATAACCATGGGGTTTAGTATTTGTCTTATTAAATTCAACTGGAATGCACTTGAGGATAACAGAGATGATCATGCTAATTGAGCCAATGACGACGCTGAGCAGCCACAGCTCCCCGCTCAATGGTACAGTGTTTGCAAAAGTGCCAAGAAATTCTACTATGATCACTTGGAATATGACAGTAGCTGTCAATATACCAACAAAGATCCAGTTTCTGAAGATACCTTGGAGGACATTGATCTTTTCCATCTCCCTACAATTTATTTCA]




>consensus_3842#0
TCCTTTTTTTTTTTTACACACACATTTGCGTTTATTATACATAAAAAAGAATAATTACAC
GTTATACACAGTTCACCGCTGAAGAGAAAAGCACGAAGGGTAATAATATGATACCATTTC
GACAGTTGTTAGTACCTAGAGTTCAATTTTACAAAACTGTACGCTCAAATCTCAAGCTGA
ACTCTGCAGAACCAGCTCAAACTGTACGCTTTGCAACGAAGCCTCCAAGCAGTCCACATT
TGCTGCGACATTCTCATGTAGCAGCCATATCTACTTGAAATCTTGAATCAACACCATAAA
TCCCGTAAGCTGTCTGATCTTGCAGCATGATTGGTCCTATTCCGTATACTTCATCACATA
TCTGCTGGTTATAACATCTACTTCAACTCTTCAGTATATCATGTTCAGAAACACATGATC
ATATTCAACAAAATTACATCAGTAGAGAAATCCTTACAGTGCATCCTTTTCCATTATGAT
TGATTGGGTTGCTGACCGCAGAAACCGCAGTTTGAGCGGAATTTCCGCACCTCCCGTGAA
ACTGCTATAGAATCTCTGGGCCTTCAGGAATCAACTCATAACCATGGGGTTTAGTATTTG
TCTTATTAAATTCAACTGGAATGCACTTGAGGATAACAGAGATGATCATACTAATTGAGC
CAATGACGACGCTGAGCAGCCACAGCTCCCCGCTCAATGGTACAGTGTTTGCAAAAGTGC
CAAGAAATTCTACTATGATCACTTGGAATATGACAGTAGCTGTCAATATACCAACAAAGA
TCCAGTTTCTGAAGATACCTTGGAGGACATTGATCTTTTCCATCTCCCTACAATTTATTT
CA

clustalw multiple alignements is not computed in this case