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Oryza sativa
cluster # 3895 cluster # 3895       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3895#0 length = 1422 sequences # 3  
consensusID : consensus_3895#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1422
fasta sequence 
                              [GTGGCCTCGCGGAAGGAGAGGGTGTGCACGGCCAAGGAGCGTATCAGCCGCATGCCGCCCTGCGCCGCCGGGAAGCGCAGCTCCATCTACCGCGGCGTCACCCGGCATAGGTGGACAGGCCGATATGAAGCTCACCTCTGGGATAAAAGCACATGGAATCAGAATCAGAACAAAAAAGGGAAACAAGTATATTTAGGTGCATATGATGATGAAGAGGCTGCAGCAAGAGCTTATGACCTTGCTGCATTGAAATACTGGGGAGCTGGGACACAAATAAACTTTCCTGTCTCTGATTATGCAAGAGATCTTGAGGAAATGCAGATGATCTCCAAGGAGGATTATCTTGTGTCTCTTCGGAGAAAGAGCAGTGCCTTTTCCAGGGGTTTACCAAAATATCGCGGCCTTCCTAGGCAGCTCCATAATTCCAGATGGGATGCTTCTTTGGGACACTTGCTTGGCAATGACTACATGAGCCTAGGGAAGGACATCACGCTGGATGGGAAATTTGCAGGAACCTTTGGCTTAGAGAGGAAAATTGATCTGACAAATTACATAAGGTGGTGGCTCCCAAAAAAAGACACGGCAGTCAGATACATCTAAAATGGAAGAGGTTACTGATGAAATCCGTGCTATTGAAAGTTCAATGCAACGGACTGAGCCTTATAAGTTTCCTTCCCTTGGCCTCCATTCTAACTCAAAGCCCTCTTCCGTGGTCCTATCAGCATGTGATATCTTATCTCAGTCTGATGCCTTCAAAAGCTTCTCAGAAAAATCTACAAAACTATCTGAAGAATGTACTTTTAGCAAAGAAATGGATGAAGGAAAGACAGTTACCCCAGTACCTGCAACTGGACATGACACAACTGCAGTTAACATGAACGTGAATGGGTTGCTTGTGCAAAGAGCTCCATACACATTGCCCTCTGTTACTGCACAAATGAAAAATACCTGGAACCCTGCTGATCCTTCTGCGGACCCTCTTTTCTGGACCAACTTCATCCTGCCAGCAAGTCAACCTGTCACGATGGCAACAATAGCAACAACAACGTTTGCAAAGAATGAGGTGAGTTCAAGTGATCCATTCCATGGTCAAGAGTGACCGTACGAGCTTACCAAAGTGCATGCAGGATTTGCTTTTTGGCTTGGTGGGTGATAACATCCTGCACGTCTATGGGTTTCCTTCTTCCTAGCTTTTGAGGTGACCCGTGAACAAATACCCTTTGTATCCATAGTTCATAAGCCATGAATAGAAGGTAAGAGAAGTACAACCATAGTTATGTAATATATACAGTGCCTAGTGGCCTAGTGCCCCGTTAATGATATTTAGTTATAGAGCTGTCTGTACATATCGCGGTTCTTATTTCAGCTACTTGGTTGGTTCTATAGAATGAAGAGAACAGAAGAACACGAATTTTTCAAAGC]

[+] EMBL CB643165             [GTGGCCTCGCGGAAGGAGAGGGTGTGCACGGCCAAGGAGCGTATCAGCCGCATGCCGCCCTGCGCCGCCGGGAAGCGCAGCTCCATCTACCGCGGCGTCACCCGGCATAGGTGGACAGGCCGATATGAAGCTCACCTCTGGGATAAAAGCACATGGAATCAGAATCAGAACAAAAAAGGGAAACAAGTATATTTAGGTGCATATGATGATGAAGAGGCTGCAGCAAGAGCTTATGACCTTGCTGCATTGAAATACTGGGGAGCTGGGACACAAATAAACTTTCCTGTCTCTGATTATGCAAGAGATCTTGAGGAAATGCAGATGATCTCCAAGGAGGATTATCTTGTGTCTCTTCGGAGAAAGAGCAGTGCCTTTTCCAGGGGTTTACCAAAATATCGCGGCCTTCCTAGGCAGCTCCATAATTCCAGATGGGATGCTTCTTTGGGACACTTGCTTGGCAATGACTACATGAGCCTAGGGAAGGACATCACGCTGGATGGGAAATTTGCAGGAACCTTTGGCTTAGAGAGGAAAATTGATCTGACAAATTACATAAGGTGGTGGCTCCCAAAAAAAGACACGGCAGTCAGATACATCTAAAATGGAAGAGGTTACTGATGAAATCCGTGCTATTGAAAGTTCAATGCAACGGACTGAGCCTTATAAGTTTCCTTCCCTTGGCCTCCATTCTAACTCAAAGCCCTCTTCCGTGGTCCTATCAGCATGTGATATCTTATCTCAGTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059324             [                                                                                                                                                                                                           TGATGATGAAGAGGCTGCAGCAAGAGC TATGACCTTGCTGCATTGAAATACTGGGGAGCTGGGACACAAATAAACTTTCCTGTCTCTGATTATGCAAGAGATCTTGAGGAAATGCAGATGATCTCCAAGGAGGATTATCTTGTGTCTCTTCGGAGAAAGAGCAGTGCCTTTTCCAGGGGTTTACCAAAATATCGCGGCCTTCCTAGGCAGCTCCATAATTCCAGATGGGATGCTTCTTTGGGACACTTGCTTGGCAATGACTACATGAGCCTAGGGAAGGACATCACGCTGGATGGGAAATTTGCAGGAACCTTTGGCTTAGAGAGGAAAATTGATCTGACAAATTACATAAGGTGGTGGCTCCC AAAAAAGACACGGCAGTCAGATACATCTAAAATGGAAGAGGTTACTGATGAAATCCGTGCTATTGAAAGTTCAATGCAACGGACTGAGCCTTATAAGTTTCCTTCCCTTGGCCTCCATTCTAACTCAAAGCCCTCTTCCGTGGTCCTATCAGCATGTGATATCTTATCTCAGTCTGATGCCTTCAAAAGCTTCTCAGAAAAATCTACAAAACTATCTGAAGAATGTACTTTTAGCAAAGAAATGGATGAAGGAAAGACAGTTACCCCAGTACCTGCAACTGGACATGACACAACTGCAGTTAACATGAACGTGAATGGGTTGCTTGTGCAAAGAGCTCCATACACATTGCCCTCTGTTACTGCACAAATGAAAAATACCTGGAACCCTGCTGATCCTTCTGCGGACCCTCTTTTCTGGACCAACTTCATCCTGCCAGCAAGTCAACCTGTCACGATGGCAACAATAGCAACAACAACGTTTGCAAAGAATGAGGTGAGTTCAAGTGATCCATTCCATGGTCAAGAGTGACCGTACGAGCTTACCAAAGTGCATGCAGGATTTGCTTTTTGGCTTGGTGGGTGATAACATCCTGCACGTCTATGGGTTTCCTTCTTCCTAGCTTTTGAGGTGACCCGTGAACAAATACCCTTTGTATCCATAGTTCATAAGCCATGAATAGAAGGTAAGAGAAGTACAACCATAGTTATGTAATATATACAGTGCCTAGTGGCCTAGTGCCCCGTTAATGATATTTAGTTATAGAGCTGTCTGTACATATCGCGGTTCTTATTTCAGCTACTTGGTTGGTTCTATAGAATGAAGAGAACAGAAGAACACGAATTTTTCAAAGC]
[-] EMBL CB643166             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATGTGATATCTTATCTCAGTCTGATGCCTTCAAAAGCTTCTCAGAAAAATCTACAAAACTATCTGAAGAATGTACTTTTAGCAAAGAAATGGATGAAGGAAAGACAGTTACCCCAGTACCTGCAACTGGACATGACACAACTGCAGTTAACATGAACGTGAATGGGTTGCTTGTGCAAAGAGCTCCATACACATTGCCCTCTGTTACTGCACAAATGAAAAATACCTGGAACCCTGCTGATCCTTCTGCGGACCCTCTTTTCTGGACCAACTTCATCCTGCCAGCAAGTCAACCTGTCACGATGGCAACAATAGCAACAACAACGTTTGCAAAGAATGAGGTGAGTTCAAGTGATCCATTCCATGGTCAAGAGTGACCGTACGAGCTTACCAAAGTGCATGCAGGATTTGCTTTTTGGCTTGGTGGGTGATAACATCCTGCACGTCTATGGGTTTCCTTCTTCCTAGCTTTTGAGGTGACCCGTGAACAAATACCCTTTGTATCCATAGTTCATAAGCCATGAATAGAAGGTAAGAGAAGTCCACCCATAGTTATGTAATATATACAGTGCCTAGTGGCCTAGTGCCCCGTTAATGATATTTAGTTATAGAGCTGTCTGTACATATCGCGGTTCTTATTTCAGCTACTTGGTTGGTTCTATAGAATGAAGA                            ]




>consensus_3895#0
GTGGCCTCGCGGAAGGAGAGGGTGTGCACGGCCAAGGAGCGTATCAGCCGCATGCCGCCC
TGCGCCGCCGGGAAGCGCAGCTCCATCTACCGCGGCGTCACCCGGCATAGGTGGACAGGC
CGATATGAAGCTCACCTCTGGGATAAAAGCACATGGAATCAGAATCAGAACAAAAAAGGG
AAACAAGTATATTTAGGTGCATATGATGATGAAGAGGCTGCAGCAAGAGCTTATGACCTT
GCTGCATTGAAATACTGGGGAGCTGGGACACAAATAAACTTTCCTGTCTCTGATTATGCA
AGAGATCTTGAGGAAATGCAGATGATCTCCAAGGAGGATTATCTTGTGTCTCTTCGGAGA
AAGAGCAGTGCCTTTTCCAGGGGTTTACCAAAATATCGCGGCCTTCCTAGGCAGCTCCAT
AATTCCAGATGGGATGCTTCTTTGGGACACTTGCTTGGCAATGACTACATGAGCCTAGGG
AAGGACATCACGCTGGATGGGAAATTTGCAGGAACCTTTGGCTTAGAGAGGAAAATTGAT
CTGACAAATTACATAAGGTGGTGGCTCCCAAAAAAAGACACGGCAGTCAGATACATCTAA
AATGGAAGAGGTTACTGATGAAATCCGTGCTATTGAAAGTTCAATGCAACGGACTGAGCC
TTATAAGTTTCCTTCCCTTGGCCTCCATTCTAACTCAAAGCCCTCTTCCGTGGTCCTATC
AGCATGTGATATCTTATCTCAGTCTGATGCCTTCAAAAGCTTCTCAGAAAAATCTACAAA
ACTATCTGAAGAATGTACTTTTAGCAAAGAAATGGATGAAGGAAAGACAGTTACCCCAGT
ACCTGCAACTGGACATGACACAACTGCAGTTAACATGAACGTGAATGGGTTGCTTGTGCA
AAGAGCTCCATACACATTGCCCTCTGTTACTGCACAAATGAAAAATACCTGGAACCCTGC
TGATCCTTCTGCGGACCCTCTTTTCTGGACCAACTTCATCCTGCCAGCAAGTCAACCTGT
CACGATGGCAACAATAGCAACAACAACGTTTGCAAAGAATGAGGTGAGTTCAAGTGATCC
ATTCCATGGTCAAGAGTGACCGTACGAGCTTACCAAAGTGCATGCAGGATTTGCTTTTTG
GCTTGGTGGGTGATAACATCCTGCACGTCTATGGGTTTCCTTCTTCCTAGCTTTTGAGGT
GACCCGTGAACAAATACCCTTTGTATCCATAGTTCATAAGCCATGAATAGAAGGTAAGAG
AAGTACAACCATAGTTATGTAATATATACAGTGCCTAGTGGCCTAGTGCCCCGTTAATGA
TATTTAGTTATAGAGCTGTCTGTACATATCGCGGTTCTTATTTCAGCTACTTGGTTGGTT
CTATAGAATGAAGAGAACAGAAGAACACGAATTTTTCAAAGC

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)