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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3940 cluster # 3940       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3940#0 length = 697 sequences # 3  

consensusID : consensus_3940#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 697
fasta sequence
                              [CACAGTCGCTCGCTAGCGAAGCACGCGATCTCGCAATTCGCAAGCAAACCAACCAAACCAAGAAAACCGAGGAAGAAGGAGGCGAAAGCCATTAGCCATCCATGGAGGCCAACAAGAGCAGCAAGCCGGAGAGATCATCATCTCAGCCCACCCACGACGCCGTCGTCCCGGCGTCGGCGAGCGGCGGCGCTGCGGCCTCCTGCGAGGCGGGCAGGACGCCATCGTCCGGTGGCTTGCCGTTGTCCACCGCCGCGTCGAGCGAGAAGAGGCCGGGCTCCGGCGGCGGCGGCGAGCTGCCAGGGTGGAAGCTGGACTGCCTCTGCAGGGAGTCCGGCATGTCGGCGGCGGTCATCAGCGGGGGATTCCCCTGCTTCTGATCGAGTACAACTAGGCTAGGCTCCTGTATTTGGACGCAAGAATTTTTGTTTGGATCGCGTCGGAATTCAAACTATTCTCGGTGAAATCTCTCTGAAATTCTCGCGTTTCAAACAGGGCTTTGCAAAGCATACTTTACTACGTACTTGTCTTGTCTAGTTTGGTTGTGTTGCTGTGAGCTATGATCCATATATATGATATATGTTCATCATGTTCATTTGTTTGTTTCTTTTCACTCTTAAGTATAAGGTTGTAAGAGATCATGCTGATCAAGTTCTACTGATCTTGTAATTCAGGTCTGCCAATTCTTCTTAGAAAAGCT]

[+] EMBL AK119724             [CACAGTCGCTCGCTAGCGAAGCACGCGATCTCGCAATTCGCAAGCAAACCAACCAAACCAAGAAAACCGAGGAAGAAGGAGGCGAAAGCCATTAGCCATCCATGGAGGCCAACAAGAGCAGCAAGCCGGAGAGATCATCATCTCAGCCCACCCTCGACGCCGTCGTCCCGGCGTCGGCGAGCGGCGGCGCTGCGGCCTCCTGCGAGGCGGGCAGGACGCCATCGTCCGGTGGCTTGCCGTTGTCCACCGCCGCGTCGAGCGAGAAGAGGCCGGGCTCCGGCGGCGGCGGCGAGCTGCCAGGGTGGAAGCTGGACTGCCTCTGCAGGGAGTCCGGCATGTCGGCGGCGGTCATCAGCGGGGGATTCCCCTGCTTCTGATCGAGTACAACTAGGCTAGGCTCCTGTATTTGGACGCAAGAATTTTTGTTTGGATCGCGTCGGAATTCAAACTATTCTCGGTGAAATCTCTCTGAAATTCTCGCGTTTCAAACAGGGCTTTGCAAAGCATACTTTACTACGTACTTGTCTTGTCTAGTTTGGTTGTGTTGCTGTGAGCTATGATCCATATATATGATATATGTTCATCATGTTCATTTGTTTGTTTCTTTTCACTCTTAAGTATAAGGTTGTAAGAGATCATGCTGATCAAGTTCTACTGATCTTGTAATTCAGGTCTGCC                   ]
[+] EMBL AK107771             [CACAGTCGCTCGCTAGCGAAGCACGCGATCTCGCAATTCGCAAGCAAACCAACCAAACCAAGAAAACCGAGGAAGAAGGAGGCGAAAGCCATTAGCCATCCATGGAGGCCAACAAGAGCAGCAAGCCGGAGAGATCATCATCTCAGCCCACCCACGACGCCGTCGTCCCGGCGTCGGCGAGCGGCGGCGCTGCGGCCTCCTGCGAGGCGGGCAGGACGCCATCGTCCGGTGGCTTGCCGTTGTCCACCGCCGCGTCGAGCGAGAAGAGGCCGGGCTCCGGCGGCGGCGGCGAGCTGCCAGGGTGGAAGCTGGACTGCCTCTGCAGGGAGTCCGGCATGTCGGCGGCGGTCATCAGCGGGGGATTCCCCTGCTTCTGATCGAGTACAACTAGGCTAGGCTCCTGTATTTGGACGCAAGAATTTTTGTTTGGATCGCGTCGGAATTCAAACTATTCTCGGTGAAATCTCTCTGAAATTCTCGCGTTTCAAACAGGGCTTTGCAAAGCATACTTTACTACGTACTTGTCTTGTCTAGTTTGGTTGTGTTGCTGTGAGCTATGATCCATATATATGATATATGTT                                                                                                                    ]
[-] EMBL CF326193             [                                                                                                                   GAGCAGCAAGCCGGAGAGATCATCATCTCAGCCCACCCCCGACGCCGTCGTCCCGGCGTCGGCGAGCGGCGGCGCTGCGGCCTCCTGCGAGGCGGGCAGGACGCCATCGTCCGGTGGCTTGCCGTTGTCCACCGCCGCGTCGAGCGAGAAGAGGCCGGGCTCCGGCGGCGGCGGCGAGCTGCCAGGGTGGAAGCTGGACTGCCTCTGCAGGGAGTCCGGCATGTCGGCGGCGGTCATCAGCGGGGGATTCCCCTGCTTCTGATCGAGTACAACTAGGCTAGGCTCCTGTATTTGGACGCAAGAATTTTTGTTTGGATCGCGTCGGAATTCAAACTATTCTCGGTGAAATCTCTCTGAAATTCTCGCGTTTCAAACAGGGCTTTGCAAAGCATACTTTACTACGTACTTGTCTTGTCTAGTTTGGTTGTGTTGCTGTGAGCTATGAACAATATATATGATATATGTTCATCATGTTCATTTGTTTGTTTCTTTTCACTCTTAAGTATAAGGTTGTAAGAGATCATGCTGATCAAGTTCTACTGATCTTGTAATTCAGGTCTGCCAATTCTTCTTAGAAAAGCT]


>consensus_3940#0 CACAGTCGCTCGCTAGCGAAGCACGCGATCTCGCAATTCGCAAGCAAACCAACCAAACCA AGAAAACCGAGGAAGAAGGAGGCGAAAGCCATTAGCCATCCATGGAGGCCAACAAGAGCA GCAAGCCGGAGAGATCATCATCTCAGCCCACCCACGACGCCGTCGTCCCGGCGTCGGCGA GCGGCGGCGCTGCGGCCTCCTGCGAGGCGGGCAGGACGCCATCGTCCGGTGGCTTGCCGT TGTCCACCGCCGCGTCGAGCGAGAAGAGGCCGGGCTCCGGCGGCGGCGGCGAGCTGCCAG GGTGGAAGCTGGACTGCCTCTGCAGGGAGTCCGGCATGTCGGCGGCGGTCATCAGCGGGG GATTCCCCTGCTTCTGATCGAGTACAACTAGGCTAGGCTCCTGTATTTGGACGCAAGAAT TTTTGTTTGGATCGCGTCGGAATTCAAACTATTCTCGGTGAAATCTCTCTGAAATTCTCG CGTTTCAAACAGGGCTTTGCAAAGCATACTTTACTACGTACTTGTCTTGTCTAGTTTGGT TGTGTTGCTGTGAGCTATGATCCATATATATGATATATGTTCATCATGTTCATTTGTTTG TTTCTTTTCACTCTTAAGTATAAGGTTGTAAGAGATCATGCTGATCAAGTTCTACTGATC TTGTAATTCAGGTCTGCCAATTCTTCTTAGAAAAGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)