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Oryza sativa
cluster # 396 cluster # 396       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_396#0 length = 1221 sequences # 2  

consensusID : consensus_396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1221
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGGTGTTGCGATGGATGCGGCGGGGATGGCAGGTGCGCCCATGGCGTCGCCCCCGCCGTACGACAACCCGACGGCTGGGTTCCCCATCGCGATCGTGATCGCCATCGGGTTCATGGTCACCTCGCTCATCCTCGCCAGCTACTACTTCCTCGTCGTCCGCTGCTGGCTCCGTGGCACGGGCGGCGGAGGCGCCGCCGGGGCCGGGCTGCTGCACCGCTCGCGCCGCGAGAGCGCGGCGGAGCGCGTCGCCGCGGTGTTCTTCACCGACTACGAGGCCGAGGTTGGAGGCGGGCTCGACCCGGACGTCGTGGCGGCGCTCCCCGTCGTCAAGTACCGCCGCGCCGCCTCCGGGAAGTCGGCGTCGCCGCAGGAGTGCGCCGTGTGCCTGTCGGAGTTCGTCCGGGACGAGCGGCTCAAGCTGCTGCCGAGCTGCTCCCACGCGTTCCACATCGACTGCATCGACACGTGGCTCCACCACAACGTCAGCTGCCCGCTCTGCCGCACGGTGGTCACCGGCGGCGCGATCGGCCTCCTCGTCCGCGACGACCAGTATGACGCGTCCAGCCGGGAACTGGCCGCCGGCGAGAGGCGCATCGACGCCGCCGCGAGGATGGGCCACGGGATCAGCTCGTGCAGGTTCCCCAAGACCGGGGCCGAGCAGGAGCCGATCCGGCGATCCTTCTCCATGGATTGCTTCCTAGGCGATCTCGGCCGGAAGCCACCGCCGCCGCCGCCGAAGGATCCCGCAGGCTCGGAGGCCGGGCCGAGCCACCCCGACGCGGCCGGTAGCAGCAGTATCGTCGGCACC-GCCGGCGCCGGCGAGACCAGCGGCCGGTTTCGGCGGTTGCTGTCGTCGTTCGGGC-TCGGCCGGAGCTCGCGGAGCACGGTGTTGCCCATCCACCTCGACCCATGAACCACCTCGGGTTCGTGCAACCTAATTAACTCGCTCTTACCGCTTAATTAATTGAGAGTTACTAGCCATTTGTGCCACTTGTGTGCGTGCAATGTGTACAGCAGATAGCAGAATTGGGGTTGGAATTTTGCCGTTCCATTGATTACTTCTTGGCTCCTTGCATCTCAAGTGTTCCCGCCCGGACATGTCAATCTTTCGTACGTGATCGATCGATATTAATTAGTTGGTACATCAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGTCGCGGCCGCTAGAC]

[+] EMBL AK109394             [TTCCTCGAGCACTGTTGGCCTACTGGGTGTTGCGATGGATGCGGCGGGGATGGCAGGTGCGCCCATGGCGTCGCCCCCGCCGTACGACAACCCGACGGCTGGGTTCCCCATCGCGATCGTGATCGCCATCGGGTTCATGGTCACCTCGCTCATCCTCGCCAGCTACTACTTCCTCGTCGTCCGCTGCTGGCTCCGTGGCACGGGCGGCGGAGGCGCCGCCGGGGCCGGGCTGCTGCACCGCTCGCGCCGCGAGAGCGCGGCGGAGCGCGTCGCCGCGGTGTTCTTCACCGACTACGAGGCCGAGGTTGGAGGCGGGCTCGACCCGGACGTCGTGGCGGCGCTCCCCGTCGTCAAGTACCGCCGCGCCGCCTCCGGGAAGTCGGCGTCGCCGCAGGAGTGCGCCGTGTGCCTGTCGGAGTTCGTCCGGGACGAGCGGCTCAAGCTGCTGCCGAGCTGCTCCCACGCGTTCCACATCGACTGCATCGACACGTGGCTCCACCACAACGTCAGCTGCCCGCTCTGCCGCACGGTGGTCACCGGCGGCGCGATCGGCCTCCTCGTCCGCGACGACCAGTATGACGCGTCCAGCCGGGAACTGGCCGCCGGCGAGAGGCGCATCGACGCCGCCGCGAGGATGGGCCACGGGATCAGCTCGTGCAGGTTCCCCAAGACCGGGGCCGAGCAGGAGCCGATCCGGCGATCCTTCTCCATGGATTGCTTCCTAGGCGATCTCGGCCGGAAGCCACCGCCGCCGCCGCCGAAGGATCCCGCAGGCTCGGAGGCCGGGCCGAGCCACCCCGACGCGGCCGGTAGCAGCAGTATCGTCGGCACC GCCGGCGCCGGCGAGACCAGCGGCCGGTTTCGGCGGTTGCTGTCGTCGTTCGGGC TCGGCCGGAGCTCGCGGAGCACGGTGTTGCCCATCCACCTCGACCCATGAACCACCTCGGGTTCGTGCAACCTAATTAACTCGCTCTTACCGCTTAATTAATTGAGAGTTACTAGCCATTTGTGCCACTTGTGTGCGTGCAATGTGTACAGCAGATAGCAGAATTGGGGTTGGAATTTTGCCGTTCCATTGATTACTTCTTGGCTCCTTGCATCTCAAGTGTTCCCGCCCGGACATGTCAATCTTTCGTACGTGATCGATCGATATTAATTAGTTGGTACATCAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGCAGGTCGCGGCCGCTAGAC]
[+] EMBL BI813224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCTCGT CAGGTTCCCCAAGACCGGCGCCGAGCAGGATCCGATCCGGCGATCCTTCTCCATGGATTGCTTCCTAGGCGATCTCGGCCGGAAGCCACCGCCGCCGCCGCCGAAGGATCCCGCAGGCTCGGAGGCCGGGCCGAGCCACCCCGACGCGGCCGGCAGCAGCAGTATCGTCGGCACCAGCCGGCGCCGGCGAGACCAGCGGCCGG TTCCGCGGTTGCTGTCGTCGTTCGGGCATCGGCCGGAGCTCGCGGAGCACGGTGTTGCCCATCCACCTCGACCCATGAACCACCTCGGGTTCGTGCAACCTAATTAACTCGCTCTTACCGCTTAATTAATTGAGAGTTACTAGCCATTTGTGCCACTTGTGTGCGTGCAATGTGTACAGCAGATAGCAGAATTGGGGTTGGAATTTTGCCGTTCCATTGATTAaaaa                                                                                                                                       ]


>consensus_396#0 TTCCTCGAGCACTGTTGGCCTACTGGGTGTTGCGATGGATGCGGCGGGGATGGCAGGTGC GCCCATGGCGTCGCCCCCGCCGTACGACAACCCGACGGCTGGGTTCCCCATCGCGATCGT GATCGCCATCGGGTTCATGGTCACCTCGCTCATCCTCGCCAGCTACTACTTCCTCGTCGT CCGCTGCTGGCTCCGTGGCACGGGCGGCGGAGGCGCCGCCGGGGCCGGGCTGCTGCACCG CTCGCGCCGCGAGAGCGCGGCGGAGCGCGTCGCCGCGGTGTTCTTCACCGACTACGAGGC CGAGGTTGGAGGCGGGCTCGACCCGGACGTCGTGGCGGCGCTCCCCGTCGTCAAGTACCG CCGCGCCGCCTCCGGGAAGTCGGCGTCGCCGCAGGAGTGCGCCGTGTGCCTGTCGGAGTT CGTCCGGGACGAGCGGCTCAAGCTGCTGCCGAGCTGCTCCCACGCGTTCCACATCGACTG CATCGACACGTGGCTCCACCACAACGTCAGCTGCCCGCTCTGCCGCACGGTGGTCACCGG CGGCGCGATCGGCCTCCTCGTCCGCGACGACCAGTATGACGCGTCCAGCCGGGAACTGGC CGCCGGCGAGAGGCGCATCGACGCCGCCGCGAGGATGGGCCACGGGATCAGCTCGTGCAG GTTCCCCAAGACCGGGGCCGAGCAGGAGCCGATCCGGCGATCCTTCTCCATGGATTGCTT CCTAGGCGATCTCGGCCGGAAGCCACCGCCGCCGCCGCCGAAGGATCCCGCAGGCTCGGA GGCCGGGCCGAGCCACCCCGACGCGGCCGGTAGCAGCAGTATCGTCGGCACCGCCGGCGC CGGCGAGACCAGCGGCCGGTTTCGGCGGTTGCTGTCGTCGTTCGGGCTCGGCCGGAGCTC GCGGAGCACGGTGTTGCCCATCCACCTCGACCCATGAACCACCTCGGGTTCGTGCAACCT AATTAACTCGCTCTTACCGCTTAATTAATTGAGAGTTACTAGCCATTTGTGCCACTTGTG TGCGTGCAATGTGTACAGCAGATAGCAGAATTGGGGTTGGAATTTTGCCGTTCCATTGAT TACTTCTTGGCTCCTTGCATCTCAAGTGTTCCCGCCCGGACATGTCAATCTTTCGTACGT GATCGATCGATATTAATTAGTTGGTACATCAAAAAAAAAAAAGGCCACATGTGCTCGAGC TGCAGGTCGCGGCCGCTAGAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)