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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3981 cluster # 3981       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3981#0 length = 641 sequences # 3  

consensusID : consensus_3981#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 641
fasta sequence
                              [TCTTTTTTTTAGATAGATAATAGATAGATTCCAGTTGTGAAGACAAGAAAATTTGATCTTGCACAAGTTGTCATTACATTCCAGTTCTGTTTTGTACTATCCGAATTCAGAAACAGAGCACCATCCATAATACCATACTGCTTATTTAAAACCTGCTAGCTGCATGCCATTCACTCGTTCAGATTTCAGAGTGATGGTTGTCACGCCGTCGGGTAGGAGGCCATCATGGCGAGGCCACAGACGCCCTCCTTGTCGGCGACGCCCCTCTCCATCCTGACGTAGCCGTCCTCCCCCCACGACGTGCCCCACGAGTTCTTCATCAGCCAGTACTTGGTCCCGT-CGC-TCGCCACGCCGTACCCGACCGCCGTGATCGCGTGGTCCAGCTCGGTGGCGCAGCCGGCGGCGCCGGAGAGGACGCCGCCCTTGTAGAACTGGAAGTGCCGGTCGCCGCCGTCGATGGCCACCGACACCGGCTGGTTCGCCACGGCCTTGAGCAGCGCCGCCTCGTCGTTCGCCGGCACGTCCTCGTACCCCTTGATGGTCGCGGCGGCGGCGCCGGCGCCGGCGGTGGCNCACTTGTCNTCGCTCGCCGTGTACGGGTAGTCGGACTCCGCGGCGAGGCCGCCGTTCTTGATGATGAA]

[+] EMBL CB624786             [TCTTTTTTTTAGATAGATAATAGATAGATTCCAGTTGTGAAGACAAGAAAATTTGATCTTGCACAAGTTGTCATTACATTCCAGTTCTGTTTTGTACTATCCGAATTCAGAAACAGAGCACCATCCATAATACCATACTGCTTATTTAAAACCTGCTAGCTGCATGCCATTCACTCGTTCAGATTTCAGAGTGATGGTTGTCACGCCGTCGGGTAGGAGGCCATCATGGCGAGGCCACAGACGCCCTCCTTGTCGGCGACGCCCCTCTCCATCCTGACGTAGCCGTCCTCCCCCCACGACGTGCCCCACGAGTTCTTCATCAGCCAGTACTTGGTCCCGT CGC TCGCCACGCCGTACCCGACCGCCGTGATCGCGTGGTCCAGCTCGGTGGCGCAGCCGGCGGCGCCGGAGAGGACGCCGCCCTTGTAGAACTGGAAGTGCCGGTCGCCGCCGTCGATGGCCACCGACACCGGCTGGTTCGCCACGGCCTTGAGCAGCGCCGCCTCGTCGTTCGCCGGCACGTCCTCGTACCCCTTGATGGTCGCGGCGGCGGCGCCGGCGCCGGCGGTGGCNCACTTGTCNTCGCTCGCCGTGTACGGGTAG                                      ]
[+] EMBL CB624902             [           GATAGATAATAGATAGATTCCAGTTGTGAAGACATGAAAATTTGATCTTGCACAAGTTGTCATTACATTCCAGTTCTGTTTTGTACTATCCGAATTCAGAAACAGAGCACCATCCATAATACCATACTGCTTATTTAAAACCTGCTAGCTGCATGCCATTCACTCGTTCAGATTTCAGAGTGATGGTTGTCACGCCGTCGGGTAGGAGGCCATCATGGCGAGGCCACAGACGCCCTCCTTGTCGGCGACGCCCCTCTCCATCCTGACGTAGCCGTCCTCCCCCCACGACGTGCCCCACGAGTTCTTCATCAGCCAGTACTTGGTCCCGT CGC TCGCCACGCCGTACCCGACCGCCGTGATCGCGTGGTCCAGCTCGGTGGCGCAGCCGGCGGCGCCGGAGAGGACGCCGCCCTTGTAGAACTGGAAGTGCCGGTCGCCGCCGTCGATGGCCACCGACACCGGCTGGTTCGCCACGGCCTTGAGCAGCGCCGCCTCGTCGTTCGCCGGCACGTCCTCGTACCCCTTGATGGTCGCGGCGGCGGCGCCGGCGCCGGCGGTGGCGCACTTGTCGTCGCTCGCCGTGTACGGGTAGTCGGACTCCGCGGCGAGGCCGCCGTTCTTGATGATGAA]
[-] EMBL AU071094             [                               tttTTTTGAAGACAAGAAATTTTGATCTTGCACAAGTTGTCATTACATTCCAGTTCTGTTTTGTACTATCCGAATTCAGAAACAGAGCACCATCCATAATACCATACTGCTTATTTAAAACCTGCTAGCTGCATGCCATTCACTCGTTCAGATTTCAGAGTGATGGTTGTCACGCCGTCGGGTAGGAGGCCATCATGGCGAGGCCACAGACGCCCTCCTTGTCGGCGACGCCCCTCTCCATCCTGACGTAGCCGTCCTCCCCCCACGACGTGCCCCACGAGTTCTTCATCAGCCAGTACTTGGTCCCGTCCGCGTGGCCctgaact                                                                                                                                                                                                                                                                                              ]


>consensus_3981#0 TCTTTTTTTTAGATAGATAATAGATAGATTCCAGTTGTGAAGACAAGAAAATTTGATCTT GCACAAGTTGTCATTACATTCCAGTTCTGTTTTGTACTATCCGAATTCAGAAACAGAGCA CCATCCATAATACCATACTGCTTATTTAAAACCTGCTAGCTGCATGCCATTCACTCGTTC AGATTTCAGAGTGATGGTTGTCACGCCGTCGGGTAGGAGGCCATCATGGCGAGGCCACAG ACGCCCTCCTTGTCGGCGACGCCCCTCTCCATCCTGACGTAGCCGTCCTCCCCCCACGAC GTGCCCCACGAGTTCTTCATCAGCCAGTACTTGGTCCCGTCGCTCGCCACGCCGTACCCG ACCGCCGTGATCGCGTGGTCCAGCTCGGTGGCGCAGCCGGCGGCGCCGGAGAGGACGCCG CCCTTGTAGAACTGGAAGTGCCGGTCGCCGCCGTCGATGGCCACCGACACCGGCTGGTTC GCCACGGCCTTGAGCAGCGCCGCCTCGTCGTTCGCCGGCACGTCCTCGTACCCCTTGATG GTCGCGGCGGCGGCGCCGGCGCCGGCGGTGGCNCACTTGTCNTCGCTCGCCGTGTACGGG TAGTCGGACTCCGCGGCGAGGCCGCCGTTCTTGATGATGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)