cluster # 3986

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Oryza sativa
cluster # 3986 cluster # 3986 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3986#0 length = 3132 sequences # 3
consensusID : consensus_3986#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3132
fasta sequence
                              [TCCGCTGAAAGCCCTGAAACCACACGAACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTCCGCCGCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTAGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCAAGCTCAAGCTGTTGCACAGAATGCAGAAAACCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGTAAGTTTGAGTTCTTTGTCTGGAAGTAAGACTTCTATTTATAGTTTCCTCCATTGCCTCAACATTTCAGCTTGTCTAAACTGACCACTCTTATAAGTTTTATTACTTTATACTGTAGATGTCTTGCTGTCCTGTAACTCAATATGCTACCCACTAATATCTAGGAGTTACCATTGTACTAAAAATGTATAAAACATGGTTGATAGGAGTTCAGAAAGTGCATTTATCTGGGTTCATCCGATCACTGGTAGAATATGTTACCACTTGAACCAAACTTTATGTAATTTATAATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAGGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCGAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATGAATTGCACTCAAAAAG]

[+] EMBL AK120156             [TCCGCTGAAAGCCCTGAAACCACACGAACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTCCGCCGCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCTCGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATGCATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGTGGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCAGCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACGGCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGGTGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCCCGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATGCAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAACAGCAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATAGCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAATGGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCTGAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATGTCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTTACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAATCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATTAATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACGGTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGACTGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAGTCATCAAGCTTGCCTGTGTGGAACAGAGTAGATAATTGTGGATTTTGGCGTCAATTCACAGTTCGGGAGGGAAGATGTCAAGCTCAAGCTGTTGCACAGAATGCAGAAAACCAAATATCAGAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGATGAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTACCTCTAACAACTATAGTAGTGCAAGTAAGTTTGAGTTCTTTGTCTGGAAGTAAGACTTCTATTTATAGTTTCCTCCATTGCCTCAACATTTCAGCTTGTCTAAACTGACCACTCTTATAAGTTTTATTACTTTATACTGTAGATGTCTTGCTGTCCTGTAACTCAATATGCTACCCACTAATATCTAGGAGTTACCATTGTACTAAAAATGTATAAAACATGGTTGATAGGAGTTCAGAAAGTGCATTTATCTGGGTTCATCCGATCACTGGTAGAATATGTTACCACTTGAACCAAACTTTATGTAATTTATAATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATCACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAAAAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATCTGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGATTGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTATGTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAATCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTATCAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAATATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGAAAGATGAGGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGCAGAAAAATGACAATGGCGAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTTCTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATGAATTGCACTCAAAAAG]
[+] EMBL CA766062             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGATAGGGTTGGCAATGGGTTGGAAGGCAGCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCAT GGGAAGCATCATTGATCAATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGGTGATGGTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTGTTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGNTGCTGCTGGCCTAGAACATCAATTTTTCAT                        ]
[+] EMBL CB678743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCATTCAGGACTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCAATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGGGATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACTCTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATTGTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAGAGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAAGCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATG                ]




>consensus_3986#0
TCCGCTGAAAGCCCTGAAACCACACGAACACGCGGCTTTGCTTCGGTTTCGTTGCCCCTC
CGCCGCCGCCGCCGCCGCCGCCACCCATGGAGATGGAGATGGAGGACAACAAGGCGCCCT
CGCCGCCATCACCTATGGAGTCCGACGTCGCTGGGGAGAAGCGCAAGAGGGAGGACGATG
CATCCTCCTCCGCTGTACTTGCCGCCGCCAACAACACCGGCGGTGCCCAGCACCCCATGT
GGAAGACCAGCCTCTGCTCCTTCTTCCGCCGCCGCGCCGCCTCCTCCGCCGACGGCTGCA
GCCACGGCGACTCCTGCCGCTACGCGCACTCCGAGGAGGAGCTCCGCCCGCGCCCCGACG
GCACCTGGGACCCCACCTCCGACCGCGCCAAGAAGCTCCGCAAGGTCGCCGCCGACGAGG
TGGAGGAAGAGGTGGTCACCATTGACGACAAGGCCCTGGACAAGTGCCTCGTCGGCCTCC
CGAGGGGATGGGCCAACGACAGGCTCAAGACTTTCCTCCAAGACAAGGGAATCTCGTATG
CAACAGCGAAGAAGAAGAAGGGAATGACTGTTGGTTTTGTAACTTTTGAAAATATTGAAC
AGCAAGAATGCTATCGAGGTACTTACAGAGAACCAATCTGGTGGAAAGGAAATAAAGATA
GCAGATGCCAATCGTAGATCTCATCAAAAGCTGCACACAGAAAAGCCTGTATCTGACAAT
GGAGTGACAACAGAAAATGGTACTAGTGTTGATGTTCCTCCTGGGGAGACATCTGCACCT
GAAGCAGCAATATCAAATAAAAAAAGTGTCCGCGATGCAGTTACTCCCCTTGCCCACATG
TCTTATAATGATCAGCTAGAGCACAAAAAGAATTCTGTTGCGCAGATACTGAAGAGGCTT
ACTCGCAATGCTAGGAAAGCTTGCCCTACTGGCATTCCCCTTCCAGATTGGGTTTTTAAA
TCCAAAGAAATTGGTGGTCTTCCTTGCAAGCTTGAAGGCATTCTGGAGTCCCCAGTGATT
AATGGATACCGTAACAAGTGTGAATTCTCTGTGGGATTTTCTTTGGAGGGAAAAAAGACG
GTTGGATTTATGCTTGGAAATTTTAGGGAAGGTGTGACTGCTGTTGAGGAACCTGTGGAC
TGCCCAAATGTCTCAGAAATTTCCTGCAAATATGCTCTGATGTTCCAAGACTTTCTGCAG
TCATCAAGCTTGCCTGTGTGGAACAGAGTAGATAATTGTGGATTTTGGCGTCAATTCACA
GTTCGGGAGGGAAGATGTCAAGCTCAAGCTGTTGCACAGAATGCAGAAAACCAAATATCA
GAAGTCATGCTTATTGTTCAGGTTTGCTCCACAGGTGTTGATGATGCAGTAATGAAAGAT
GAATTTGACAAGTTGACCGTTGCCCTGCAACAAGGAGCAGCAACATGCTCACCTCCATTA
CCTCTAACAACTATAGTAGTGCAAGTAAGTTTGAGTTCTTTGTCTGGAAGTAAGACTTCT
ATTTATAGTTTCCTCCATTGCCTCAACATTTCAGCTTGTCTAAACTGACCACTCTTATAA
GTTTTATTACTTTATACTGTAGATGTCTTGCTGTCCTGTAACTCAATATGCTACCCACTA
ATATCTAGGAGTTACCATTGTACTAAAAATGTATAAAACATGGTTGATAGGAGTTCAGAA
AGTGCATTTATCTGGGTTCATCCGATCACTGGTAGAATATGTTACCACTTGAACCAAACT
TTATGTAATTTATAATGGTATATTTGCAACTACGGAATCTTTTACTGCTCATGCAGGATC
ACAAAGGAATTTCAAATGCTGCACCAGCTGATTGTCCATTGATCCCACTATTGGTGCCAA
AAGTAGATCAATCAGAAGGTACAGTGGATAAAACAAGAATCCATGACCACATCGGTAATC
TGTGGTTCTCCATATCACCAACAGCATTTTTTCAGGTCAATACTCTCGCTGCAGAAAGAT
TGTATACCCTTGCTGGTGATTGGGCCAACCTCAATTCGGGCACATTACTTTTTGACGTAT
GTTGTGGAACAGGAACAATTGGACTGACCTTGGCACACCGTGTTGGAATGGTTGTTGGAA
TCGAAATGAATGAATCAGCAGTTTCTGATGCTGAGAGAAATGCGCTCATTAACGGTGTAT
CAAATTGTCGCTTTGTCTGTGGGAAGGCCGAAGATGTGATGGGGTCTCTTCTCACTGAAT
ATCTTGGTTCACCGCAGCAGGACATTCCTGTTTCTGAAGGTGCAGTAAGTGGTACTGTGA
AAGATGAGGAAGTTATTGACAGTTCTAAGAATAGTGGCGAAAATTTGGACAGCTCAATGC
AGAAAAATGACAATGGCGAAAGCCAGCAGCTCGGGGATGCACCAGCTGATTCTTCCTCTT
CTGCCATAGATGAGATAAAGGGGAATTCCAATGATAGGGTTGGCAATGGGTTGGAAGGCA
GCCATGATGAATACAATGAGGTTGCTGGAGAAGATATTCATGGGGAAGCATCATTGATCA
ATGAGTCTGTTGACCTGAAAGTATCGGACTGTTTGGAGGACAGAAAGACATCTGATGATG
GTTCTTCCATTTCTAACAATGATGTGACTGCAGCTACTGCATGTCAGTTCGAAGACATTG
TTGCTATTGTGGATCCTCCTCGTGTTGGGCTTCACCCTACTGTGATCAAGGCATTGAGGA
CTCATCCACGAATTCGACGTCTAGTGTACATTTCCTGCAATCCAGATAGTCTAGTTGCCA
ATGCGATTGAGCTGTGTACCCCATCATCTGAGAAACAGGAAAAGAACAAAGGAAACCGGG
GATGGCGAACCATGAGCAGCGCTGGCCTCGCGAGGCAGCGTACAAAGTCGATGCCCAACT
CTGAGCCATTTGTTCCCAAGAGAGCCATGGCTGTTGATTTGTTCCCCCACACCTCGCATT
GTGAGATGGTTATGCTTTTCGAGAGGTGAACAAGTAGCCGGCTCATCGAATTCTTTCTAG
AGATTTTTGATCTTTGTTGAAATTTTCATCATGTTGTATGATGCATTACAAGACCCAGAA
GCCATGACAATTGATTGTTGCTGCTGGCCTGGAACATCAATTTTTCATGTTAAATGAATT
GCACTCAAAAAG
clustalw multiple alignements is not computed in this case