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Oryza sativa
cluster # 4041 cluster # 4041       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4041#0 length = 1509 sequences # 3  
consensusID : consensus_4041#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1509
fasta sequence 
                              [GTTTCGGGAGGCGCCGGCGTTCCGCAACGGCGCGGGGTGCGCGGGCGCGCCGACGATCCACATCGCCATGACGCTGGACACCACCTACCTCCGGGGCTCCCTCGCCGGCGTCCTCTCCGTGCTCCGCCACGCCGCCTGCCCGGAGTCCATCGCCTTCCACTTCGTCGCCTCCTCGGCGTCCCCCGCGCGCCGCCTCGCGGCGCTCCGGCGGGCCCTCGCGGCGGCGTTCCCCACGCTCCCGGCGACCGTCCACCGCTTCGACGCGCGCCTTGTCCGCGGCAAGATCTCCACCTCCGTCCGCCGCGCCCTCGACCAGCCCCTCAATTACGCGCGCATCTACCTCGCCGACCTCCTCCCGCGCTCGGTGTCCCGCGTCCTCTACCTCGACTCCGACCTCCTCGTCGTCGACGACGTCGCCCGCCTCTGGGCCACCGACCTCGGCCCCGACGCCGCCCTCGCCGCCCCCGAGTATTGCCACGCCAACTTCACCTCCTACTTCACCGACGCGTTCTGGAGTCACCCCGAGTACTCCTCCATCTTCACCAACCGGGGGCGCGCGCCGTGCTACTTCAACACCGGCGTCATGGTCATCGACCTGGACAGGTGGCGAGCCGGCGGGTACACCGTGAAGCTGGAGTACTGGATGGAGGTCCAGAAGCAGGAGGCCAGGATATACGAGCTGGGGTCGCTCCCGCCGTTCCTCCTGGTGTTCGCCGGCGAGGTGAAGGCCGTGGAGCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGTCGCGGGGCAGTGCCGGGAGCTTCACCCTGGGCCGGTGAGCCTGCTGCACTGGAGCGGCAAGGGGAAGCCGTGGCTTCGGCTCGACGCCGGCCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTACGACCTGCTCCGCCGCCGCGGCGCTCGCGACGACCTCCTCGCCGCCGTCGCCTGACAATGCGGGGCCCACGTCGCTGGAGCGATCGGTTTGTTCGAGTTCGGATCGGTGGCCTCGCTGCTCTCGACACTCGTCGCGAGGTAGGTGTCGGCGCTGGGGCACTGACACTCCGGCCCACTTGGGCCTCCACGAATGGGCCAACATGGCTGAGGTTGGAGTGGCCCTGTCGGTACTGACAGCCGGGCCCACATGTTGGTGATGGATGGCAAGATTTTGTTCGTGAGGGGAAGCTGACGACGCAGCAATGGTTGTGTACAGCTGTCTTTTTTTTTTTTGCCTGTTTAAGGGAATAGATTACCAGATAATTCAGATTCCATTCGTTTTAGACAGGGTTAAAAATTCGTTGTTGATGTGTTCCATAATAAAATACGCAACAAAAAAATATTGTCAAAGGAATATATTTTGGTATGTTTGGAATTAGGGCTATACACTTGTACTAGTAAATCAGATGTTTAGTGGAGATGTTGTTCTTGGGAAACGGGATAAAGCTTTGGTGTAAATGTAACACTCCATTTGTTAATTGCTTTCAAGAACAGCTAATTGGATGTCGT]

[+] EMBL AK120509             [GTTTCGGGAGGCGCCGGCGTTCCGCAACGGCGCGGGGTGCGCGGGCGCGCCGACGATCCACATCGCCATGACGCTGGACACCACCTACCTCCGGGGCTCCCTCGCCGGCGTCCTCTCCGTGCTCCGCCACGCCGCCTGCCCGGAGTCCATCGCCTTCCACTTCGTCGCCTCCTCGGCGTCCCCCGCGCGCCGCCTCGCGGCGCTCCGGCGGGCCCTCGCGGCGGCGTTCCCCACGCTCCCGGCGACCGTCCACCGCTTCGACGCGCGCCTTGTCCGCGGCAAGATCTCCACCTCCGTCCGCCGCGCCCTCGACCAGCCCCTCAATTACGCGCGCATCTACCTCGCCGACCTCCTCCCGCGCTCGGTGTCCCGCGTCCTCTACCTCGACTCCGACCTCCTCGTCGTCGACGACGTCGCCCGCCTCTGGGCCACCGACCTCGGCCCCGACGCCGCCCTCGCCGCCCCCGAGTATTGCCACGCCAACTTCACCTCCTACTTCACCGACGCGTTCTGGAGTCACCCCGAGTACTCCTCCATCTTCACCAACCGGGGGCGCGCGCCGTGCTACTTCAACACCGGCGTCATGGTCATCGACCTGGACAGGTGGCGAGCCGGCGGGTACACCGTGAAGCTGGAGTACTGGATGGAGGTCCAGAAGCAGGAGGCCAGGATATACGAGCTGGGGTCGCTCCCGCCGTTCCTCCTGGTGTTCGCCGGCGAGGTGAAGGCCGTGGAGCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGTCGCGGGGCAGTGCCGGGAGCTTCACCCTGGGCCGGTGAGCCTGCTGCACTGGAGCGGCAAGGGGAAGCCGTGGCTTCGGCTCGACGCCGGCCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTACGACCTGCTCCGCCGCCGCGGCGCTCGCGACGACCTCCTCGCCGCCGTCGCCTGACAATGCGGGGCCCACGTCGCTGGAGCGATCGGTTTGTTCGAGTTCGGATCGGTGGCCTCGCTGCTCTCGACACTCGTCGCGAGGTAGGTGTCGGCGCTGGGGCACTGACACTCCGGCCCACTTGGGCCTCCACGAATGGGCCAACATGGCTGAGGTTGGAGTGGCCCTGTCGGTACTGACAGCCGGGCCCACATGTTGGTGATGGATGGCAAGATTTTGTTCGTGAGGGGAAGCTGACGACGCAGCAATGGTTGTGTACAGCTGTCTTTTTTTTTTTTGCCTGTTTAAGGGAATAGATTACCAGATAATTCAGATTCCATTCGTTTTAGACAGGGTTAAAAATTCGTTGTTGATGTGTTCCATAATAAAATACGCAACAAAAAAATATTGTCAAAGGAATATATTTTGGTATGTTTGGAATTAGGGCTATACACTTGTACTAGTAAATCAGATGTTTAGTGGAGATGTTGTTCTTGGGAAACGGGATAAAGCTTTGGTGTAAATGTAACACTCCATTTGTTAATTGCTTTCAAGAACAGCTAATTGGATGTCGT]
[+] EMBL AK072297             [GTTTCGGGAGGCGCCGGCGTTCCGCAACGGCGCGGGGTGCGCGGGCGCGCCGACGATCCACATCGCCATGACGCTGGACACCACCTACCTCCGGGGCTCCCTCGCCGGCGTCCTCTCCGTGCTCCGCCACGCCGCCTGCCCGGAGTCCATCGCCTTCCACTTCGTCGCCTCCTCGGCGTCCCCCGCGCGCCGCCTCGCGGCGCTCCGGCGGGCCCTCGCGGCGGCGTTCCCCACGCTCCCGGCGACCGTCCACCGCTTCGACGCGCGCCTTGTCCGCGGCAAGATCTCCACCTCCGTCCGCCGCGCCCTCGACCAGCCCCTCAATTACGCGCGCATCTACCTCGCCGACCTCCTCCCGCGCTCGGTGTCCCGCGTCCTCTACCTCGACTCCGACCTCCTCGTCGTCGACGACGTCGCCCGCCTCTGGGCCACCGACCTCGGCCCCGACGCCGCCCTCGCCGCCCCCGAGTATTGCCACGCCAACTTCACCTCCTACTTCACCGACGCGTTCTGGAGTCACCCCGAGTACTCCTCCATCTTCACCAACCGGGGGCGCGCGCCGTGCTACTTCAACACCGGCGTCATGGTCATCGACCTGGACAGGTGGCGAGCCGGCGGGTACACCGTGAAGCTGGAGTACTGGATGGAGGTCCAGAAGCAGGAGGCCAGGATATACGAGCTGGGGTCGCTCCCGCCGTTCCTCCTGGTGTTCGCCGGCGAGGTGAAGGCCGTGGAGCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGTCGCGGGGCAGTGCCGGGAGCTTCACCCTGGGCCGGTGAGCCTGCTGCACTGGAGCGGCAAGGGGAAGCCGTGGCTTCGGCTCGACGCCGGCCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTACGACCTGCTCCGCCGCCGCGGCGCTCGCGACGACCTCCTCGCCGCCGTCGCCTGACAATGCGGGGCCCACGTCGCTGGAGCGATCGGTTTGTTCGAGTTCGGATCGGTGGCCTCGCTGCTCTCGACACTCGTCGCGAGGTAGGTGTCGGCGCTGGGGCACTGACACTCCGGCCCACTTGGGCCTCCACGAATGGGCCAACATGGCTGAGGTTGGAGTGGCCCTGTCGGTACTGACAGCCGGGCCCACATGTTGGTGATGGATGGCAAGATTTTGTTCGTGAGGGGAAGCTGACGACGCAGCAATGGTTGTGTACAGCTGTC TTTTTTTTTTTGCCTGTTTAAGGGAATAGATTACCAGATAATTCAGATTCCATTCGTTTTAGACAGGGTTAAAAATTCGTTGTTGATGTGTTCCATAATAAAATACGCAACAAAA                                                                                                                                                                            ]
[+] EMBL CB656332             [                                                                                                                                                                                                                                                                                                                               CTCAATTACGCGCGCATCTACCTCGCCGACCTCCTCCCGCGCTCGGTGTCCCGCGTCCTCTACCTCGACTCCGACCTCCTCGTCGTCGACGACGTCGCCCGCCTCTGGGCCACCGACCTCGGCCCCGACGCCGCCCTCGCCGCCCCCGAGTATTGCCACGCCAACTTCACCTCCTACTTCACCGACGCGTTCTGGAGTCACCCCGAGTACTCCTCCATCTTCACCAACCGGGGGCGCGCGCCGTGCTACTTCAACACCGGCGTCATGGTCATCGACCTGGACAGGTGGCGAGCCGGCGGGTACACCGTGAAGCTGGAGTACTGGATGGAGGTCCAGAAGCAGGAGGCCAGGATATACGAGCTGGGGTCGCTCCCGCCGTTCCTCCTGGTGTTCGCCGGCGAGGTGAAGGCCGTGGAGCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGTCGCGGGGCAGTGCCGGGAGCTTCACCCTGGGCCGGTGAGCCTGCTGCACTGGAGCGGCAAGGGGAAGCCGTGGCTTCGGCTCGACGCCGGCCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTACGACCTGCTCCGCCGCCGCGGCGCTCGCGACGACCTCCTCGCCGCCGTCGCCTGACAATGCGGGGCCCACGTCGCTGGAGCGATCGGTTTGTTCGAGTTCGGATCGGTGGCCTCGCTGCTCTCGACACTCGTCGCGAGGTAGGTGTCGGCGCTGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_4041#0
GTTTCGGGAGGCGCCGGCGTTCCGCAACGGCGCGGGGTGCGCGGGCGCGCCGACGATCCA
CATCGCCATGACGCTGGACACCACCTACCTCCGGGGCTCCCTCGCCGGCGTCCTCTCCGT
GCTCCGCCACGCCGCCTGCCCGGAGTCCATCGCCTTCCACTTCGTCGCCTCCTCGGCGTC
CCCCGCGCGCCGCCTCGCGGCGCTCCGGCGGGCCCTCGCGGCGGCGTTCCCCACGCTCCC
GGCGACCGTCCACCGCTTCGACGCGCGCCTTGTCCGCGGCAAGATCTCCACCTCCGTCCG
CCGCGCCCTCGACCAGCCCCTCAATTACGCGCGCATCTACCTCGCCGACCTCCTCCCGCG
CTCGGTGTCCCGCGTCCTCTACCTCGACTCCGACCTCCTCGTCGTCGACGACGTCGCCCG
CCTCTGGGCCACCGACCTCGGCCCCGACGCCGCCCTCGCCGCCCCCGAGTATTGCCACGC
CAACTTCACCTCCTACTTCACCGACGCGTTCTGGAGTCACCCCGAGTACTCCTCCATCTT
CACCAACCGGGGGCGCGCGCCGTGCTACTTCAACACCGGCGTCATGGTCATCGACCTGGA
CAGGTGGCGAGCCGGCGGGTACACCGTGAAGCTGGAGTACTGGATGGAGGTCCAGAAGCA
GGAGGCCAGGATATACGAGCTGGGGTCGCTCCCGCCGTTCCTCCTGGTGTTCGCCGGCGA
GGTGAAGGCCGTGGAGCACCGGTGGAACCAGCACGGGCTCGGCGGCGACAACGTCGCGGG
GCAGTGCCGGGAGCTTCACCCTGGGCCGGTGAGCCTGCTGCACTGGAGCGGCAAGGGGAA
GCCGTGGCTTCGGCTCGACGCCGGCCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTA
CGACCTGCTCCGCCGCCGCGGCGCTCGCGACGACCTCCTCGCCGCCGTCGCCTGACAATG
CGGGGCCCACGTCGCTGGAGCGATCGGTTTGTTCGAGTTCGGATCGGTGGCCTCGCTGCT
CTCGACACTCGTCGCGAGGTAGGTGTCGGCGCTGGGGCACTGACACTCCGGCCCACTTGG
GCCTCCACGAATGGGCCAACATGGCTGAGGTTGGAGTGGCCCTGTCGGTACTGACAGCCG
GGCCCACATGTTGGTGATGGATGGCAAGATTTTGTTCGTGAGGGGAAGCTGACGACGCAG
CAATGGTTGTGTACAGCTGTCTTTTTTTTTTTTGCCTGTTTAAGGGAATAGATTACCAGA
TAATTCAGATTCCATTCGTTTTAGACAGGGTTAAAAATTCGTTGTTGATGTGTTCCATAA
TAAAATACGCAACAAAAAAATATTGTCAAAGGAATATATTTTGGTATGTTTGGAATTAGG
GCTATACACTTGTACTAGTAAATCAGATGTTTAGTGGAGATGTTGTTCTTGGGAAACGGG
ATAAAGCTTTGGTGTAAATGTAACACTCCATTTGTTAATTGCTTTCAAGAACAGCTAATT
GGATGTCGT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)