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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4061#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2279 fasta sequence
[GCCGCGCGAAACGCGGCGCGCGATGCCAGCCACCATTTGCAGCGCGGAGCGAGCGAGGATGGAGATGGAGCTCGACGTCCAATTTTAGCCGCCATGGCGGCCGGGATTAGAAGGCGGGAAAGATCACGAGAGGAGGGGACAAAGGAGAGGTCAGCCCCCTTCCTCGGTCTCTCCGCCGCCGCCTACCATGGGGTCGTCGTCCCTCCCCCGCGCGGCCGTCCTCGCCGTGGCGCTCCTCCTCCTCCTCGCCGACTCCGGCGAGGCGTTCTTCGACCTCTTCAGCATCTTCCGCCCGCGCTCCGACAGCGATTACTTCCCGTTCGATGGGTCGCCGGGGCAGGCGAAGCGGAAGCCGAAGATCGAGCAGGAGGAGGATGGCGCCGCGCCGGCCACAGCCACGGGCCTCACCAAGGTGCCGCCGCTGGGCGCGCCCAGCAAGGCGGCGCTCGACACCATCGTCCTCCCCGTCGACGACTCCGCGGGGCACGCCGGGTCGTGGACCATCGTCAGCGAGAACTCCGGCGTGTCGGCGATGCACCTCGCCGTCATGCGCCACGGCAAGGCCATCATGTTCGACACCAGCACCACCGGCCGGTCGCTGATGCGCCTCCCCATGAATAACTGCCGCGCCGACCCGCGCGCCAAGAGGGAAGGCACCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAGCACCGGCGCGCTCCGGTCGCTCAAGACCGCCACCGACACGTGGTGTTCGTCCGGCGCGTTCGACGCCGACGGCAACCTGATCCAGACCGGTGGCTACTTCGAGGGCGACAAGGCGGTGAGGCGGCTCGACGCGTGCGACACCTGCGACTGGCGCGAGTACCCGAACAGCTTCGCCGAGGGGAGGTGGTACGCGACGCAGCAGGTGCTCCCCGACGGGCGGTTCATCGTGTTCGGCGGCCGGCGAGCCTTCAGCTACGAGTTCGTGCCGCAGCCGGGGATGACCAACGGCCAGTCCATCAAGTTCCCGCTCCTCCGCGAGACCACCGACGACGTCGAGAACAACCTCTACCCGTTCGTCAACCTCCTCCCCGACGGCAACCTCTTCGTCTTCGCCAACGACCGCTCCGTCGTCTTCGACCACAGGACGGGCAAGGTCGTCCGCGAGCTCCCCAAGCTCGCCGGCGGCGGGCGGAACCACCCGGCGTCGGCCATGTCGGCGATGCTCCCGCTCGACCTCCGCAACCTGACCCGCGGCGCCGACCCGGAGCCGGAGGTGATCGTCTGCGGCGGCGCGCTCAAGACGGCGTTCAGGCTGGGGGAGAACAACACGTACCAGCCGACGCTCCGCGACTGCGCCCGGATCAGCCTAGGCAAGATCGACGCGGTGTGGGCGGTGGAGGCGATGCCGGTGGGCCGCGTCATGGGCGACCTGCTCGTCCTCCCCACCGGCGACCTGCTCATGCTCAACGGCGCCGCCAAGGGGAGCTCCGGGTGGGGGTTCGCGCGGCAGCCCATCCTGTCGCCGATCCTCTACTCGCCGCGGCACCCGGAGGGGTCGCGGTTCCGGCCGCTGGCGGCGTCGACGGTGGCGCGGATGTACCACTCCACCAGCGCCGTGCTCCCGGACGCCACGGTGCTGGTCGCCGGCGGGAACACGAACGCGGCGTACAACTTCAGCGGCGTGGACTTCCCGACGGAGGTGCGGGTGGAGCGGTTCGCGCCGCCGTACCTGAGCAGGGAGCTGACCGGGAACCGGGCGGTGATCGACGTGGCGTCGGTGCCGGCGGGCGGGATGCGGTACGGGACCAAGTTCACGTTCAGGTTCCACACGCCGGTGGCGGCGGTGGAGTGGGGCGACGTGAGGGTGACCATGTACGCGCCGCCCTTCACGACGCACGGCTACTCCATGAACCAGCGCTTGCTCGTGCTGCCCGTCGCCGGCTTCTCGGCGCAGGGGCAGATGTACGAGCTCACCGTCGACACGCCGCGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTCGTCTACGTCGTATCCAAGGACGTGCCCAGCGAGGCCGCTTGGGTCAAAATACAGTAAATGTTGGTGTAACTAATCCATGTACACTCTTCCTCTCTCTTTTTTTCCTGTGTCTGTTACCCCTTTTACTTAGGTAGGGAAGGTATATACGGATATCAGATCGACCAAACTGGTGCTTTCTTGTGCTCTATCGTATGCTTGCGCTAGAAATATGACCATGCACAAAGTGATTTTAGGTGTAGCTGGTCTCCACAAATTGATCTTCACAAAATCATTTTAGATA]
[+] EMBL AK100171 [GCCGCGCGAAACGCGGCGCGCGATGCCAGCCACCATTTGCAGCGCGGAGCGAGCGAGGATGGAGATGGAGCTCGACGTCCAATTTTAGCCGCCATGGCGGCCGGGATTAGAAGGCGGGAAAGATCACGAGAGGAGGGGACAAAGGAGAGGTCAGCCCCCTTCCTCGGTCTCTCCGCCGCCGCCTACCATGGGGTCGTCGTCCCTCCCCCGCGCGGCCGTCCTCGCCGTGGCGCTCCTCCTCCTCCTCGCCGACTCCGGCGAGGCGTTCTTCGACCTCTTCAGCATCTTCCGCCCGCGCTCCGACAGCGATTACTTCCCGTTCGATGGGTCGCCGGGGCAGGCGAAGCGGAAGCCGAAGATCGAGCAGGAGGAGGATGGCGCCGCGCCGGCCACAGCCACGGGCCTCACCAAGGTGCCGCCGCTGGGCGCGCCCAGCAAGGCGGCGCTCGACACCATCGTCCTCCCCGTCGACGACTCCGCGGGGCACGCCGGGTCGTGGACCATCGTCAGCGAGAACTCCGGCGTGTCGGCGATGCACCTCGCCGTCATGCGCCACGGCAAGGCCATCATGTTCGACACCAGCACCACCGGCCGGTCGCTGATGCGCCTCCCCATGAATAACTGCCGCGCCGACCCGCGCGCCAAGAGGGAAGGCACCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAGCACCGGCGCGCTCCGGTCGCTCAAGACCGCCACCGACACGTGGTGTTCGTCCGGCGCGTTCGACGCCGACGGCAACCTGATCCAGACCGGTGGCTACTTCGAGGGCGACAAGGCGGTGAGGCGGCTCGACGCGTGCGACACCTGCGACTGGCGCGAGTACCCGAACAGCTTCGCCGAGGGGAGGTGGTACGCGACGCAGCAGGTGCTCCCCGACGGGCGGTTCATCGTGTTCGGCGGCCGGCGAGCCTTCAGCTACGAGTTCGTGCCGCAGCCGGGGATGACCAACGGCCAGTCCATCAAGTTCCCGCTCCTCCGCGAGACCACCGACGACGTCGAGAACAACCTCTACCCGTTCGTCAACCTCCTCCCCGACGGCAACCTCTTCGTCTTCGCCAACGACCGCTCCGTCGTCTTCGACCACAGGACGGGCAAGGTCGTCCGCGAGCTCCCCAAGCTCGCCGGCGGCGGGCGGAACCACCCGGCGTCGGCCATGTCGGCGATGCTCCCGCTCGACCTCCGCAACCTGACCCGCGGCGCCGACCCGGAGCCGGAGGTGATCGTCTGCGGCGGCGCGCTCAAGACGGCGTTCAGGCTGGGGGAGAACAACACGTACCAGCCGACGCTCCGCGACTGCGCCCGGATCAGCCTAGGCAAGATCGACGCGGTGTGGGCGGTGGAGGCGATGCCGGTGGGCCGCGTCATGGGCGACCTGCTCGTCCTCCCCACCGGCGACCTGCTCATGCTCAACGGCGCCGCCAAGGGGAGCTCCGGGTGGGGGTTCGCGCGGCAGCCCATCCTGTCGCCGATCCTCTACTCGCCGCGGCACCCGGAGGGGTCGCGGTTCCGGCCGCTGGCGGCGTCGACGGTGGCGCGGATGTACCACTCCACCAGCGCCGTGCTCCCGGACGCCACGGTGCTGGTCGCCGGCGGGAACACGAACGCGGCGTACAACTTCAGCGGCGTGGACTTCCCGACGGAGGTGCGGGTGGAGCGGTTCGCGCCGCCGTACCTGAGCAGGGAGCTGACCGGGAACCGGGCGGTGATCGACGTGGCGTCGGTGCCGGCGGGCGGGATGCGGTACGGGACCAAGTTCACGTTCAGGTTCCACACGCCGGTGGCGGCGGTGGAGTGGGGCGACGTGAGGGTGACCATGTACGCGCCGCCCTTCACGACGCACGGCTACTCCATGAACCAGCGCTTGCTCGTGCTGCCCGTCGCCGGCTTCTCGGCGCAGGGGCAGATGTACGAGCTCACCGTCGACACGCCGCGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTCGTCTACGTCGTATCCAAGGACGTGCCCAGCGAGGCCGCTTGGGTCAAAATACAGTAAATGTTGGTGTAACTAATCCATGTACACTCTTCCTCTCTCTTTTTTTCCTGTGTCTGTTACCCCTTTTACTTAGGTAGGGAAGGTATATACGGATATCAGATCGACCAAACTGGTGCTTTCTTGTGCTCTATCGTATGCTTGCGCTAGAAATATGACCATGCACAAAGTGATTTTAGGTGTAGCTGGTCTCCACAAATTGATCTTCACAAAATCATTTTAGATA]
consensusID : consensus_4061#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1972 fasta sequence
[GACGCACATCGTCCGTCCCACCACGATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGTCCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAAGCAGGGGCAGGCGGTGCCGCTGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCGCCGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGGGTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCAGCACGGCAAGGCCATAATGTTCGACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGCGCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACACGTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAGGGGGACAAGTCTGTCAGGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAGATGGTACGGGACGCAGCTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCTGGCCGGGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCAACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTACGCGAGCTTCCGATCCTCCCCGGCGGCTCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCGCAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGGGAGACCAGCACGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCCTCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTCCGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCGTTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGCAGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTACCTCAGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCAGGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACTTCAAGGTGACCATGTACGCGCCGCCGTTCACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACACGGTCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGCCGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAAAAAAGAGCATACGTGAACCCCGCGCGCGTGGTGCTTTGCATGTCAACGGGAAACTATTAACTCCTGAGGATG]
[+] EMBL AK106997 [GACGCACATCGTCCGTCCCACCACGATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGTCCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAAGCAGGGGCAGGCGGTGCCGCTGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCGCCGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGGGTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCAGCACGGCAAGGCCATAATGTTCGACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGCGCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACACGTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAGGGGGACAAGTCTGTCAGGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAGATGGTACGGGACGCAGCTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCTGGCCGGGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCAACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTACGCGAGCTTCCGATCCTCCCCGGCGGCTCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCGCAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGGGAGACCAGCACGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCCTCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTCCGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCGTTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGCAGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTACCTCAGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCAGGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACTTCAAGGTGACCATGTACGCGCCGCCGTTCACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACACGGTCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGCCGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAAAAAAGAGCATACGTGAACCCCGCGCGCGTGGTGCTTTGCATGTCAACGGGAAACTATTAACTCCTGAGGATG]
consensusID : consensus_4061#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1193 fasta sequence
[CCGGGGGGAGGAGGATGACCAACGGCCAGTCCATCAAGTTCCCGCTCCTCCGCGAGACCACCGACGACGTCGAGAACAACCTCTACCCGTTCGTCAACCTCCTCCCCGACGGCAACCTCTTCGTCTTCGCCAACGACCGCTCCGTCGTCTTCGACCACAGGACGGGCAAGGTCGTCCGCGAGCTCCCCAAGCTCGCCGGCGGCGGGCGGAACCACCCGGCGTCGGCCATGTCGGCGATGCTCCCGCTCGACCTCCGCAACCTGACCCGCGGCGCCGACCCGGAGCCGGAGGTGATCGTCTGCGGCGGCGCGCTCAAGACGGCGTTCAGGCTGGGGGAGAACAACACGTACCAGCCGACGCTCCGCGACTGCGCCCGCATCAACCTAGGCAAGATCGACGCGGTGTGGGCGGTGGAGGCGATGCCGGTGGGCCGCGTCATGGGCGACCTGCTCGTCCTCCCCACCGGCGACCTGCTCATGCTCAACGGCGCCGCCAAGGGGAGCTCCGGGTGGGGGTTCGCGCGGCAGCCCATCCTGTCGCCGATCCTCTACTCGCCGCGGCACCCGGAGGGGTCGCGGTTCCGGCCGCTGGCGGCGTCGACGGTGGCGCGGATGTACCACTCCACCAGCGCCGTGCTCCCGGACGCCACGGTGCTGGTCGCCGGCGGGAACACGAACGCGGCGTACAACTTCAGCGGCGTGGACTTCCCGACGGAGGTGCGGGTGGAGCGGTTCGCGCCGCCGTACCTGAGCAGGGAGCTGACCGGGAACCGGGCGGTGATCGACGTGGCGTCGGTGCCGGCGGGCGGGATGCGGTACGGGACCAAGTTCACGTTCAGGTTCCACACGCCGGTGGCGGCGGTGGAGTGGGGCGACGTGAGGGTGACCATGTACGCGCCGCCCTTCACGACGCACGGCTACTCCATGAACCAGCGCTTGCTCGTGCTGCCCGTCGCCGGCTTCTCGGCGCAGGGGCAGATGTACGAGCTCACCGTCGACACGCCGCGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTCGTCTACGTCGTATCCAAGGACGTGCCCAGCGAGGCCGCTTGGGTCAAAATACAGTAAATGTTGGTGTAACTAATCCATGTACACTCTTCCTCTCTCTTTTTTTCCTGTGTCTGTTACCCCTTTTACTTAGGTAGGGAAGGTATATACGGATAT]
[+] EMBL AK071304 [CCGGGGGGAGGAGGATGACCAACGGCCAGTCCATCAAGTTCCCGCTCCTCCGCGAGACCACCGACGACGTCGAGAACAACCTCTACCCGTTCGTCAACCTCCTCCCCGACGGCAACCTCTTCGTCTTCGCCAACGACCGCTCCGTCGTCTTCGACCACAGGACGGGCAAGGTCGTCCGCGAGCTCCCCAAGCTCGCCGGCGGCGGGCGGAACCACCCGGCGTCGGCCATGTCGGCGATGCTCCCGCTCGACCTCCGCAACCTGACCCGCGGCGCCGACCCGGAGCCGGAGGTGATCGTCTGCGGCGGCGCGCTCAAGACGGCGTTCAGGCTGGGGGAGAACAACACGTACCAGCCGACGCTCCGCGACTGCGCCCGCATCAACCTAGGCAAGATCGACGCGGTGTGGGCGGTGGAGGCGATGCCGGTGGGCCGCGTCATGGGCGACCTGCTCGTCCTCCCCACCGGCGACCTGCTCATGCTCAACGGCGCCGCCAAGGGGAGCTCCGGGTGGGGGTTCGCGCGGCAGCCCATCCTGTCGCCGATCCTCTACTCGCCGCGGCACCCGGAGGGGTCGCGGTTCCGGCCGCTGGCGGCGTCGACGGTGGCGCGGATGTACCACTCCACCAGCGCCGTGCTCCCGGACGCCACGGTGCTGGTCGCCGGCGGGAACACGAACGCGGCGTACAACTTCAGCGGCGTGGACTTCCCGACGGAGGTGCGGGTGGAGCGGTTCGCGCCGCCGTACCTGAGCAGGGAGCTGACCGGGAACCGGGCGGTGATCGACGTGGCGTCGGTGCCGGCGGGCGGGATGCGGTACGGGACCAAGTTCACGTTCAGGTTCCACACGCCGGTGGCGGCGGTGGAGTGGGGCGACGTGAGGGTGACCATGTACGCGCCGCCCTTCACGACGCACGGCTACTCCATGAACCAGCGCTTGCTCGTGCTGCCCGTCGCCGGCTTCTCGGCGCAGGGGCAGATGTACGAGCTCACCGTCGACACGCCGCGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTCGTCTACGTCGTATCCAAGGACGTGCCCAGCGAGGCCGCTTGGGTCAAAATACAGTAAATGTTGGTGTAACTAATCCATGTACACTCTTCCTCTCTCTTTTTTTCCTGTGTCTGTTACCCCTTTTACTTAGGTAGGGAAGGTATATACGGATAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4061#0 GCCGCGCGAAACGCGGCGCGCGATGCCAGCCACCATTTGCAGCGCGGAGCGAGCGAGGAT 60
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 ------------------------------------------------------------
consensus_4061#0 GGAGATGGAGCTCGACGTCCAATTTTAGCCGCCATGGCGGCCGGGATTAGAAGGCGGGAA 120
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 ------------------------------------------------------------
consensus_4061#0 AGATCACGAGAGGAGGGGACAAAGGAGAGGTCAGCCCCCTTCCTCGGTCTCTCCGCCGCC 180
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 ---------------------------------------------GACGCACATCGTCCG 15
consensus_4061#0 GCCTACCATGGGGTCGTCGTCCCTCCCCCGCGCGGCCGTCCTCGCCGTGGCGCTCCTCCT 240
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 TCCCACCACGATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGC 75
consensus_4061#0 CCTCCTCGCCGACTCCGGCGAGGCGTTCTTCGACCTCTTCAGCATCTTCCGCCCGCGCTC 300
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 C------GCCGGCGAGGCGGACGGCTCCCACGATGTCCTCGACATCTTCGGCACGCGCTC 129
consensus_4061#0 CGACAGCGATTACTTCC------CGTTCGATGGGTCGCCGGGGCAGGCGAAGCGGAAGCC 354
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 CGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAAGCAGGGGCAGGCGGTGCCGCTGCC 189
consensus_4061#0 GAAGAT---------------CGAGCAGGAGGAGGATGGCGCCGCGCCGGCCACAGCCAC 399
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 GCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAG 249
consensus_4061#0 GGGCCTCACCAAGGTGCCGCCGCTGGGCGCGCCCAGCAAGGCGGCGCTCGACACCATCGT 459
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 CGGGCTCTCGAAGGCGCCGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAA 309
consensus_4061#0 CCTCCCCGTCGACGACTCCGCGGGGCACGCCGGGTCGTGGACCATCGTCAGCGAGAACTC 519
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 GCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGGGTGGAACCTGGTGAGCGAGAACTC 369
consensus_4061#0 CGGCGTGTCGGCGATGCACCTCGCCGTCATGCGCCACGGCAAGGCCATCATGTTCGACAC 579
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 CGGCGTGTCCGCCATGCACCTGGTGGTCATGCAGCACGGCAAGGCCATAATGTTCGACAC 429
consensus_4061#0 CAGCACCACCGGCCGGTCGCTGATGCGCCTCCCCATGAATAACTGCCGCGCCGACCCGCG 639
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 GTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCG 489
consensus_4061#0 CGCCAAGAGGGAAGGCACCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAGCAC 699
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 GAGCAAGCAGCCCGGCGCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACAC 549
consensus_4061#0 CGGCGCGCTCCGGTCGCTCAAGACCGCCACCGACACGTGGTGTTCGTCCGGCGCGTTCGA 759
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 CGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACACGTGGTGCTCGTCGGGGGCGTTCGA 609
consensus_4061#0 CGCCGACGGCAACCTGATCCAGACCGGTGGCTACTTCGAGGGCGACAAGGCGGTGAGGCG 819
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 CGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAGGGGGACAAGTCTGTCAGGTA 669
consensus_4061#0 GCTCGACGCGTGCGACACCTGCGACTGGCGCGAGTACCCGAACAGCTTCGCCGAGGGGAG 879
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 CCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAG 729
consensus_4061#0 GTGGTACGCGACGCAGCAGGTGCTCCCCGACGGGCGGTTCATCGTGTTCGGCGGCCGGCG 939
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 ATGGTACGGGACGCAGCTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACG 789
consensus_4061#0 AGCCTTCAGCTACGAGTTCGTGCCGCAGCCGGGGATGACCAACGGCCAGTCCATCAAGTT 999
consensus_4061#2 --------------------CCGGGGGGAGGAGGATGACCAACGGCCAGTCCATCAAGTT 40
consensus_4061#1 CGCGTTCAGCTACGAGTTCGTCCCGGCGGCTGGCCGGGCAAACGCCAGGGCCACGCCTTT 849
* * * * * **** * * *** **
consensus_4061#0 CCCGCTCCTCCGCGAGACCACCGACGACGTCGAGAACAACCTCTACCCGTTCGTCAACCT 1059
consensus_4061#2 CCCGCTCCTCCGCGAGACCACCGACGACGTCGAGAACAACCTCTACCCGTTCGTCAACCT 100
consensus_4061#1 GCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCAACCT 909
* ** ***** ** ************** *********** ***** ***********
consensus_4061#0 CCTCCCCGACGGCAACCTCTTCGTCTTCGCCAACGACCGCTCCGTCGTCTTCGACCACAG 1119
consensus_4061#2 CCTCCCCGACGGCAACCTCTTCGTCTTCGCCAACGACCGCTCCGTCGTCTTCGACCACAG 160
consensus_4061#1 CCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAG 969
****** ***** * ******* ******************** **** *** ** ****
consensus_4061#0 GACGGGCAAGGTCGTCCGCGAGCTCCCCAAGCTCGCCGGCGGCGGGCGGAACCACCCGGC 1179
consensus_4061#2 GACGGGCAAGGTCGTCCGCGAGCTCCCCAAGCTCGCCGGCGGCGGGCGGAACCACCCGGC 220
consensus_4061#1 GACCGGGCAGGTCGTACGCGAGCTTCCGATCCTCCCCGGCGGCTCCCGGAACTACCCTGC 1029
*** ** ******* ******** ** * *** ******** ****** **** **
consensus_4061#0 GTCGGCCATGTCGGCGATGCTCCCGCTCGACCTCCGCAACCTGACCCGCGGCGCCGACCC 1239
consensus_4061#2 GTCGGCCATGTCGGCGATGCTCCCGCTCGACCTCCGCAACCTGACCCGCGGCGCCGACCC 280
consensus_4061#1 CTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCGCAA---------AGGGGCCGGCCT 1080
** ********* ** * ** ** ** *********** ** **** **
consensus_4061#0 GGAGCCGGAGGTGATCGTCTGCGGCGGCGCGCTCAAGACGGCGTTCAGGCTGGGGGAGAA 1299
consensus_4061#2 GGAGCCGGAGGTGATCGTCTGCGGCGGCGCGCTCAAGACGGCGTTCAGGCTGGGGGAGAA 340
consensus_4061#1 TAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGGGAGAC 1140
******* *** ************* ***** ** **** *** *******
consensus_4061#0 CAACACGTACCAGCCGACGCTCCGCGACTGCGCCCGGATCAGCCTAGGCAAGATCGACGC 1359
consensus_4061#2 CAACACGTACCAGCCGACGCTCCGCGACTGCGCCCGCATCAACCTAGGCAAGATCGACGC 400
consensus_4061#1 CAGCACGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGC 1200
** ***** ** ** ******* ******** ** **** ** ** ** **
consensus_4061#0 GGTGTGGGCGGTGGAGGCGATGCCGGTGGGCCGCGTCATGGGCGACCTGCTCGTCCTCCC 1419
consensus_4061#2 GGTGTGGGCGGTGGAGGCGATGCCGGTGGGCCGCGTCATGGGCGACCTGCTCGTCCTCCC 460
consensus_4061#1 GCGGTGGGCGCTCGACCAGATGCCCTCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCC 1260
* ******* * ** ****** ******************* **** **** **
consensus_4061#0 CACCGGCGACCTGCTCATGCTCAACGGCGCCGCCAAGGGGAGCTCCGGGTGGGGGTTCGC 1479
consensus_4061#2 CACCGGCGACCTGCTCATGCTCAACGGCGCCGCCAAGGGGAGCTCCGGGTGGGGGTTCGC 520
consensus_4061#1 CACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTCCGGCTGGGGGTTCGG 1320
********************* ***************** ******* **********
consensus_4061#0 GCGGCAGCCCATCCTGTCGCCGATCCTCTACTCGCCGCGGCACCCGGAGGGGTCGCGGTT 1539
consensus_4061#2 GCGGCAGCCCATCCTGTCGCCGATCCTCTACTCGCCGCGGCACCCGGAGGGGTCGCGGTT 580
consensus_4061#1 CCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTT 1380
****** * * *** ** * ** ********* * * * *** ******
consensus_4061#0 CCGGCCGCTGGCGGCGTCGACGGTGGCGCGGATGTACCACTCCACCAGCGCCGTGCTCCC 1599
consensus_4061#2 CCGGCCGCTGGCGGCGTCGACGGTGGCGCGGATGTACCACTCCACCAGCGCCGTGCTCCC 640
consensus_4061#1 CCGCGTTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCC 1440
*** *** ****** * * *********************** * *****
consensus_4061#0 GGACGCCACGGTGCTGGTCGCCGGCGGGAACACGAACGCGGCGTACAACTTCAGCGGCGT 1659
consensus_4061#2 GGACGCCACGGTGCTGGTCGCCGGCGGGAACACGAACGCGGCGTACAACTTCAGCGGCGT 700
consensus_4061#1 CGACGCCACCGTGCTCGTGGCCGGCAGCAACACCAACTCGGCCTACAACTTCAGCGGCGT 1500
******** ***** ** ****** * ***** *** **** *****************
consensus_4061#0 GGACTTCCCGACGGAGGTGCGGGTGGAGCGGTTCGCGCCGCCGTACCTGAGCAGGGAGCT 1719
consensus_4061#2 GGACTTCCCGACGGAGGTGCGGGTGGAGCGGTTCGCGCCGCCGTACCTGAGCAGGGAGCT 760
consensus_4061#1 GGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTACCTCAGCCCGCAGCT 1560
************ ******** ** ********* * *********** *** * ****
consensus_4061#0 GACCGGGAACCGGGCGGTGATCGACGTGGCGTCGGTGCCGGCGGGCGGGATGCGGTACGG 1779
consensus_4061#2 GACCGGGAACCGGGCGGTGATCGACGTGGCGTCGGTGCCGGCGGGCGGGATGCGGTACGG 820
consensus_4061#1 GTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGG 1620
* ** ****** *** ******** ****** ** ** * * *** ***********
consensus_4061#0 GACCAAGTTCACGTTCAGGTTCCACACGCCGGTGGCGGCGGTGGAGTGGGGCGACGTGAG 1839
consensus_4061#2 GACCAAGTTCACGTTCAGGTTCCACACGCCGGTGGCGGCGGTGGAGTGGGGCGACGTGAG 880
consensus_4061#1 CGCCAGGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACTTCAA 1680
*** ********** ***** ***** * * ** **** * ******* * *
consensus_4061#0 GGTGACCATGTACGCGCCGCCCTTCACGACGCACGGCTACTCCATGAACCAGCGCTTGCT 1899
consensus_4061#2 GGTGACCATGTACGCGCCGCCCTTCACGACGCACGGCTACTCCATGAACCAGCGCTTGCT 940
consensus_4061#1 GGTGACCATGTACGCGCCGCCGTTCACGACGCATGGGTACTCCATGAACCAGCGGCTGCT 1740
********************* *********** ** ***************** ****
consensus_4061#0 CGTGCTGCCCGTCGCCGGCTTCTCGGCGCAGGGGCAGATGTACGAGCTCACCGTCGACAC 1959
consensus_4061#2 CGTGCTGCCCGTCGCCGGCTTCTCGGCGCAGGGGCAGATGTACGAGCTCACCGTCGACAC 1000
consensus_4061#1 GATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACACGGTCACCGTCGACGC 1800
* ********* * * *** * ************ * ** * *********** *
consensus_4061#0 GCCGCGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTCGTCTACGTCGTATCCAAGGA 2019
consensus_4061#2 GCCGCGGAAGCCGGAGCTCGCGCCGCCGGGGTACTACCTCGTCTACGTCGTATCCAAGGA 1060
consensus_4061#1 GCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGG 1860
***** *********************** ****** * ** ***** ** * ****
consensus_4061#0 CGTGCCCAGCGAGGCCGCTTGGGTCAAAATACA---GTAAATGTTGGTGTAACTAATCCA 2076
consensus_4061#2 CGTGCCCAGCGAGGCCGCTTGGGTCAAAATACA---GTAAATGTTGGTGTAACTAATCCA 1117
consensus_4061#1 GGTGCCGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAAAAAAGAGCATACGTGAACCC 1920
***** *** **** ** ***** ** ** ** ***** * ** * * **
consensus_4061#0 TGTACACTCTTCCTCTCTCTTTTTTTCCTGTGTCTGTTACCCCTTTTACTTAGGTAGGGA 2136
consensus_4061#2 TGTACACTCTTCCTCTCTCTTTTTTTCCTGTGTCTGTTACCCCTTTTACTTAGGTAGGGA 1177
consensus_4061#1 CGCGCGCGTGGTGCTTTGCATGTCAACGGGAAACTATTAACTCCTGAGGATG-------- 1972
* * * * * * * * * ** *** * * * *
consensus_4061#0 AGGTATATACGGATATCAGATCGACCAAACTGGTGCTTTCTTGTGCTCTATCGTATGCTT 2196
consensus_4061#2 AGGTATATACGGATAT-------------------------------------------- 1193
consensus_4061#1 ------------------------------------------------------------
consensus_4061#0 GCGCTAGAAATATGACCATGCACAAAGTGATTTTAGGTGTAGCTGGTCTCCACAAATTGA 2256
consensus_4061#2 ------------------------------------------------------------
consensus_4061#1 ------------------------------------------------------------
consensus_4061#0 TCTTCACAAAATCATTTTAGATA 2279
consensus_4061#2 -----------------------
consensus_4061#1 -----------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||