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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4068#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3457 fasta sequence
[CTTTTTAGCGAAATCCGAGAAAAAAATTGCCTGCAAAAAAAAAAATCGAAACGTCGTTCTGATCGATCGGCCGTTCGAGTTCACGGCGGAGATGGAGCACGAGCGCGGTGGCGGTGGCCGCGGCCGCGGGAGGGGTCGCGGTGGCGGGCGTGGCGGCGGTGGCGGCGATGGTCGCGGAGGCGGTTATGGTGGTGCTGGTGGTGGTGGTGTCGGCGGGCGCGGTGGGCGTGGGCCTCCTGGTGGTGGTGGTGGACGCGGGTACGAGCCCGGCGGCGGGCGTGGGTACGGTGGCGGCGGCGGCGGTGGTGGACGTGGGTATGGCGGCGGAGGCGGCGGTGGTGGGTACGAGTCCGGCGGTGGGCGTGGGTATGGCGGCGGTGGACGTGGGTATGAATCCGGCGGTGGGCGTGGACCTGGCGGCGGCGGCCGTGGGCACGAGTCCGGCGGTGGCGGTGGCCGCGGCGGGAACGTGTGGGCGCAGCCGGGGAGAGGGCGCGGAGGAGCCCCCGCCCCGGCGCCGGCGCCAGCACCAGCAGCGAGGAGGATCCAGGACGAGGGGGCCGCGAGGTCGTCGGGTACCGTTGAGCGCATTGCTTCTACTGAGGTTGTAAGAGTACAACCACCTGCACCCCCAGTTGCTGTGTCTCGTAGTGGCACGCGTGTGCCAATGCGAAGACCTGATGGTGGAGGCTCAGTATCGAAAGCCAAGGTCAAATTGTTGGTGAACCATTTTATAGTTAAGTACCGACAGGCATCAACTGTTTTTCACTATGACATAGACATCAAGCTTGATATAAGTTCCCCCAAGGCTTCAGACAAGGAGCTATCCAAGGGAGATTTTCTTACTGTCAAGGACGAGCTCTTCAAGGATGAGAGCTTTCGGCGGCTTTCATCAGCTGTTGCTTATGATGGAAAAAGAAATTTATTTACTTGTGCTGAGCTACCAGATGGTTTGTTTCGTGTCAAAGTCCGTTCACGGACTTACATTGTATCTGTGGAGTTCAAGAAGAAGCTTCCTTTGAGCCAACTCTCGGAACTGCCTGTGCCCAGAGAGGTCTTGCAGGGGCTTGATGTCATTGTGCGTGAGGCCTCTAGCTGGCGCAAGATTATCATTGGTCAGGGATTTTACTCGCAGGGCCGCAGTGTGCCCATTGGGCCGGATGTTGTAGCTCTCAAAGGAACCCAGCAGACCCTGAAATGCACTCAGAAAGGACTGATCCTTTGTGTGGACTATTCGGTTATGCCGTTTCGCAAAGCTGGACCTGTGTTGGATCTTGTTCAGAAGTCTGTGAGATACCTTGACTACAGGACAACACTAAACAAACACCAATTGGACACTTTGAAGAATGAACTCAAAGGCCAGCGTGTCACTGTAAATCATAGGAGGACAAAGCAGAAGTACATTGTTAAAGGTTTGACTGATAAACCTGCAAGTCAGATAACTTTTGTAGATTCTGAATCAGGACAGACCAAGAAGCTTCTTGATTACTATTCGCAGCAGTATGGCAAGGTTATTGAGTATCAAATGCTTCCATGCTTGGATTTGAGCAAGAGCAAGGACAAGCAAAACTATGTGCCGATTGAATTGTGTGATCTTCTTGAAGGGCAGAGATACCCAAAAGCAAGCTTAAATAGGAATTCTGATAAAACACTGAAAGAAATGGCTTTGATCCCTGCCTCAAGTAGGAAGGAGGAGATTCTGGAGTTGGTGAATGCTGACGATGGGCCTTGCAGGGGTGAAATTGCTCAGCAGTTCGGGATTTCTTTGGATGTACAAATGATGGAAGTCACTGGTAGGACCCTTCCTCCTCCCAGCCTAAAACTTGGCACCTCCAGTGGCCAACCCCCCAAATTCAATATTGATCAGCCTAACTGCCAGTGGAACCTTACGAGGAAAAGACTAGCAGAGGGCGGGGTGCTACAGTGCTGGGGCGTTGTGGACTTCAGTGCAGATTCTGGGCAGTACGCCCTGAATGGGAACATGTTTATTGACAAGATTGTCAGGAAGTGCTGCGACCTTGGCGTACAGATGAACCGTAACCCATGCATTGTGCAACTGTTAGATATGGAGGTGCTATCCGATCCACATCAGCTCTTCGAGGAGCTTAACAAAGCTAAGCAGGCGGCAGCCAGTAAGAAACAGAAGCTGCAGCTCCTCTTCTGCCCAATGTCTGATCAGCATCCTGGGTACAAGACGCTGAAGCTTATCTGCGAGACGCAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCTTCCTCGCGAACAAACAACAGGGACAGGACCAGTACATGTCCAACCTTGCTCTGAAGATCAACGGCAAGATTGGAGGAAGCAACATCCAACTGTTTGGTGAATCGCTCCCGCGGATCTCCGGCGCGCCATACATGTTCATCGGCGCCGACGTGAATCACCCATCGCCGGGGAACGTCGAGAGCCCGTCGATTGCAGCAGTGGTGGCCTCGGTGGATCAAGGCGCCAGCAAGTACGTGCCAAGAATCCGCGCTCAGCCTCACCGCTGCGAGGTGATCCAGCACCTCGGCGACATGTGCAAGGAGCTCATCGGCGTGTTCGAGAAGCGGAACCGCGTGAAGCCCCAGAGGATCATCTACTTCCGCGACGGCGTCAGCGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAAGGCGATCAAGACCAAGGACTACTCCCCGACGATCACCGTGATCGTGGCCAAGAAGCGGCACCACACCAGGCTGTTCCCCAAGGACCTGAACCAGCAGCAGACCAAGAACGGCAACGTGCTCCCCGGCACGGTGGTGGACACCGGCGTGGTCGACCCGGCGGCGTACGACTTCTACCTGTGCAGCCACAACGGGCTGATCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCTTCGCCTCCAACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCACCAAGCCGGTGTCGCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTACTACGAGGGCATGATGATGTCGCAGCCGCCACCGTCTTCCGCGGCGTCGGCGTCGTCGGCATCCTCCTCCGGCGCCGGCGCTTCCGACTTCAGGAGCTTCCCGGCGCTGCACGAGGATCTGGTGGACAACATGTTCTTCATCTGACGACAGCCTTTCGTCGCATGGTCCGGTGGTCTCTCTCTGTTCTTAGTTTACCTCTTACTGCGTGGAGTCTCAGGTCATAGACTCATTAGTCACAGACTCACAGGTTGTCTATCTTTTGACTTTTGTTGACCGTGTCGTCGGTCTTGGTAGTTGGTAGTCTTATACATACTGTTGAGGCTGCATTATGGTTGCACAAGAAAGTTTAAGAGTACTATACTGGTACTCTGTATTTTGCAATTCTCGTGCGGATGCTATGGAGTA]
[+] EMBL AK120766 [CTTTTTAGCGAAATCCGAGAAAAAAATTGCCTGCAAAAAAAAAAATCGAAACGTCGTTCTGATCGATCGGCCGTTCGAGTTCACGGCGGAGATGGAGCACGAGCGCGGTGGCGGTGGCCGCGGCCGCGGGAGGGGTCGCGGTGGCGGGCGTGGCGGCGGTGGCGGCGATGGTCGCGGAGGCGGTTATGGTGGTGCTGGTGGTGGTGGTGTCGGCGGGCGCGGTGGGCGTGGGCCTCCTGGTGGTGGTGGTGGACGCGGGTACGAGCCCGGCGGCGGGCGTGGGTACGGTGGCGGCGGCGGCGGTGGTGGACGTGGGTATGGCGGCGGAGGCGGCGGTGGTGGGTACGAGTCCGGCGGTGGGCGTGGGTATGGCGGCGGTGGACGTGGGTATGAATCCGGCGGTGGGCGTGGACCTGGCGGCGGCGGCCGTGGGCACGAGTCCGGCGGTGGCGGTGGCCGCGGCGGGAACGTGTGGGCGCAGCCGGGGAGAGGGCGCGGAGGAGCCCCCGCCCCGGCGCCGGCGCCAGCACCAGCAGCGAGGAGGATCCAGGACGAGGGGGCCGCGAGGTCGTCGGGTACCGTTGAGCGCATTGCTTCTACTGAGGTTGTAAGAGTACAACCACCTGCACCCCCAGTTGCTGTGTCTCGTAGTGGCACGCGTGTGCCAATGCGAAGACCTGATGGTGGAGGCTCAGTATCGAAAGCCAAGGTCAAATTGTTGGTGAACCATTTTATAGTTAAGTACCGACAGGCATCAACTGTTTTTCACTATGACATAGACATCAAGCTTGATATAAGTTCCCCCAAGGCTTCAGACAAGGAGCTATCCAAGGGAGATTTTCTTACTGTCAAGGACGAGCTCTTCAAGGATGAGAGCTTTCGGCGGCTTTCATCAGCTGTTGCTTATGATGGAAAAAGAAATTTATTTACTTGTGCTGAGCTACCAGATGGTTTGTTTCGTGTCAAAGTCCGTTCACGGACTTACATTGTATCTGTGGAGTTCAAGAAGAAGCTTCCTTTGAGCCAACTCTCGGAACTGCCTGTGCCCAGAGAGGTCTTGCAGGGGCTTGATGTCATTGTGCGTGAGGCCTCTAGCTGGCGCAAGATTATCATTGGTCAGGGATTTTACTCGCAGGGCCGCAGTGTGCCCATTGGGCCGGATGTTGTAGCTCTCAAAGGAACCCAGCAGACCCTGAAATGCACTCAGAAAGGACTGATCCTTTGTGTGGACTATTCGGTTATGCCGTTTCGCAAAGCTGGACCTGTGTTGGATCTTGTTCAGAAGTCTGTGAGATACCTTGACTACAGGACAACACTAAACAAACACCAATTGGACACTTTGAAGAATGAACTCAAAGGCCAGCGTGTCACTGTAAATCATAGGAGGACAAAGCAGAAGTACATTGTTAAAGGTTTGACTGATAAACCTGCAAGTCAGATAACTTTTGTAGATTCTGAATCAGGACAGACCAAGAAGCTTCTTGATTACTATTCGCAGCAGTATGGCAAGGTTATTGAGTATCAAATGCTTCCATGCTTGGATTTGAGCAAGAGCAAGGACAAGCAAAACTATGTGCCGATTGAATTGTGTGATCTTCTTGAAGGGCAGAGATACCCAAAAGCAAGCTTAAATAGGAATTCTGATAAAACACTGAAAGAAATGGCTTTGATCCCTGCCTCAAGTAGGAAGGAGGAGATTCTGGAGTTGGTGAATGCTGACGATGGGCCTTGCAGGGGTGAAATTGCTCAGCAGTTCGGGATTTCTTTGGATGTACAAATGATGGAAGTCACTGGTAGGACCCTTCCTCCTCCCAGCCTAAAACTTGGCACCTCCAGTGGCCAACCCCCCAAATTCAATATTGATCAGCCTAACTGCCAGTGGAACCTTACGAGGAAAAGACTAGCAGAGGGCGGGGTGCTACAGTGCTGGGGCGTTGTGGACTTCAGTGCAGATTCTGGGCAGTACGCCCTGAATGGGAACATGTTTATTGACAAGATTGTCAGGAAGTGCTGCGACCTTGGCGTACAGATGAACCGTAACCCATGCATTGTGCAACTGTTAGATATGGAGGTGCTATCCGATCCACATCAGCTCTTCGAGGAGCTTAACAAAGCTAAGCAGGCGGCAGCCAGTAAGAAACAGAAGCTGCAGCTCCTCTTCTGCCCAATGTCTGATCAGCATCCTGGGTACAAGACGCTGAAGCTTATCTGCGAGACGCAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCTTCCTCGCGAACAAACAACAGGGACAGGACCAGTACATGTCCAACCTTGCTCTGAAGATCAACGGCAAGATTGGAGGAAGCAACATCCAACTGTTTGGTGAATCGCTCCCGCGGATCTCCGGCGCGCCATACATGTTCATCGGCGCCGACGTGAATCACCCATCGCCGGGGAACGTCGAGAGCCCGTCGATTGCAGCAGTGGTGGCCTCGGTGGATCAAGGCGCCAGCAAGTACGTGCCAAGAATCCGCGCTCAGCCTCACCGCTGCGAGGTGATCCAGCACCTCGGCGACATGTGCAAGGAGCTCATCGGCGTGTTCGAGAAGCGGAACCGCGTGAAGCCCCAGAGGATCATCTACTTCCGCGACGGCGTCAGCGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAAGGCGATCAAGACCAAGGACTACTCCCCGACGATCACCGTGATCGTGGCCAAGAAGCGGCACCACACCAGGCTGTTCCCCAAGGACCTGAACCAGCAGCAGACCAAGAACGGCAACGTGCTCCCCGGCACGGTGGTGGACACCGGCGTGGTCGACCCGGCGGCGTACGACTTCTACCTGTGCAGCCACAACGGGCTGATCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCTTCGCCTCCAACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCACCAAGCCGGTGTCGCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTACTACGAGGGCATGATGATGTCGCAGCCGCCACCGTCTTCCGCGGCGTCGGCGTCGTCGGCATCCTCCTCCGGCGCCGGCGCTTCCGACTTCAGGAGCTTCCCGGCGCTGCACGAGGATCTGGTGGACAACATGTTCTTCATCTGACGACAGCCTTTCGTCGCATGGTCCGGTGGTCTCTCTCTGTTCTTAGTTTACCTCTTACTGCGTGGAGTCTCAGGTCATAGACTCATTAGTCACAGACTCACAGGTTGTCTATCTTTTGACTTTTGTTGACCGTGTCGTCGGTCTTGGTAGTTGGTAGTCTTATACATACTGTTGAGGCTGCATTATGGTTGCACAAGAAAGTTTAAGAGTACTATACTGGTACTCTGTATTTTGCAATTCTCGTGCGGATGCTATGGAGTA]
consensusID : consensus_4068#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1731 fasta sequence
[TAGATGCAGCAATGATGGAAGTCACTGGTAGGATTCTTGCTCCCCCCACCCTAGAACTTGGCACTGGCACCTCCAGAGGCCAGACCTTCAAATTCACTATTCATCAGGATGACTGCCAGTGGAACTGGAAGCTTAAAAAATACGATAAACGAGTAGTAGCACATGGCGGGACTCTTAACTGCTGGGGCGTCGTCGATTTCAGTGAAGGCGACCTAGAGAGCAAGTTTATTGACAAGGTTGTCAGGAAGTGCTCCGCCCTTGGCATGGTCATGACCCGTAAACCATGCTATGAGCATGTGTCAAATATGGAAGTGCTATCCGATCCAAAGAGCCTCAGAGATGCGCTTATCGAAGCGAAGCGTGCCGCGGAGGAGGAAGACAAGAAGCTGCAGCTCCTCTTCTGCCCGATGCTCAACCGGTGCCATGGGTACAAGACCCTGAAGTTGATGTGCGAGACGGAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCACCGCCGCAAAACTCGACGAAAAACGACAGGACCAGTACATTACCAACCTTGCTCTGAAGATCAACGGCAAGATCGGGGGTAGCAACATGCAGCTCGACCCGGACTCGATCCCAGTGGTGTCCGCCAAGGATTTCATGTTCATCGGTGCGGACGTGAACCACCCTCCGCCTGGGAATGTCAGTAAGGACATCCCGTCCATAGCAGCCGTGGTGGCCTGCGTTGATAAAGGCGCCAGCAAGTACGTGACAAGGATCCGCGCCCAGTATCACCGGTGCGAGATGATCCAGAACCTCGGTGATATCTGCAAGGAGCTCATCGGCGCGTATGAGAAGGTAAACAAGAAGAAGCCTGATAGCATCATCTACTTCCGCGACGGCGTCAGTGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAATAAGATCATGGTGGGTGACTACCCGAAGATCACCGTGATCGTTGCCAAGAAGAGGCACCACACGCGGCTGTTCCCCAAGGACAGGAACCAGCGGCAGACCAAGAACGGCAACGTGCTCCCCGGCACGGTGGTGGACACCGACGTGGTCGACCCGACGGCGTACGACTTCTACCTGTGCAGCCACAAGGGGGAGGTCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCTTCGCCTCCGACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCACCAAGCCGGTGTCGCTGGCCACTCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTACTACGAGGGCATGATGATGTTGCAGCCGGCGGCGTCAGCGGCATCTGCCTCCGAGGCCATGATGCCGGCGGCACAGCCCCAGGCGGCTGCGGCTGCGGCTGCGGCAGCGTCGCCGTCGTCGTCAGCGGCATCCTCATCTGAGGGCATGACGGCGTCCCAGCCCCAGGCGCCGGCGGCGGAGGCGGCATCCTCCTCCGCGGGAGCTGCCGACTTCAGGGAGTTGGCTCCGATGCACGGGGATCTGTTGAACAACATGTTCTTCCTCTGACGACAGCTTTTCGCCGCATATGGTCTCTCGTTGCCAGGTACTCCTCGTATGGTCCTGGAACTTGCGTTTGATTTTCTGGTTGTGATACCTGTCCGTGTCCCGGTGTCTGTTCTTTAACTGCCTGGAGTCTCTCATGTCTTTGGGTGGTTTATCCATAGTAAATTTT]
[+] EMBL AK107521 [TAGATGCAGCAATGATGGAAGTCACTGGTAGGATTCTTGCTCCCCCCACCCTAGAACTTGGCACTGGCACCTCCAGAGGCCAGACCTTCAAATTCACTATTCATCAGGATGACTGCCAGTGGAACTGGAAGCTTAAAAAATACGATAAACGAGTAGTAGCACATGGCGGGACTCTTAACTGCTGGGGCGTCGTCGATTTCAGTGAAGGCGACCTAGAGAGCAAGTTTATTGACAAGGTTGTCAGGAAGTGCTCCGCCCTTGGCATGGTCATGACCCGTAAACCATGCTATGAGCATGTGTCAAATATGGAAGTGCTATCCGATCCAAAGAGCCTCAGAGATGCGCTTATCGAAGCGAAGCGTGCCGCGGAGGAGGAAGACAAGAAGCTGCAGCTCCTCTTCTGCCCGATGCTCAACCGGTGCCATGGGTACAAGACCCTGAAGTTGATGTGCGAGACGGAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCACCGCCGCAAAACTCGACGAAAAACGACAGGACCAGTACATTACCAACCTTGCTCTGAAGATCAACGGCAAGATCGGGGGTAGCAACATGCAGCTCGACCCGGACTCGATCCCAGTGGTGTCCGCCAAGGATTTCATGTTCATCGGTGCGGACGTGAACCACCCTCCGCCTGGGAATGTCAGTAAGGACATCCCGTCCATAGCAGCCGTGGTGGCCTGCGTTGATAAAGGCGCCAGCAAGTACGTGACAAGGATCCGCGCCCAGTATCACCGGTGCGAGATGATCCAGAACCTCGGTGATATCTGCAAGGAGCTCATCGGCGCGTATGAGAAGGTAAACAAGAAGAAGCCTGATAGCATCATCTACTTCCGCGACGGCGTCAGTGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAATAAGATCATGGTGGGTGACTACCCGAAGATCACCGTGATCGTTGCCAAGAAGAGGCACCACACGCGGCTGTTCCCCAAGGACAGGAACCAGCGGCAGACCAAGAACGGCAACGTGCTCCCCGGCACGGTGGTGGACACCGACGTGGTCGACCCGACGGCGTACGACTTCTACCTGTGCAGCCACAAGGGGGAGGTCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCTTCGCCTCCGACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCACCAAGCCGGTGTCGCTGGCCACTCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTACTACGAGGGCATGATGATGTTGCAGCCGGCGGCGTCAGCGGCATCTGCCTCCGAGGCCATGATGCCGGCGGCACAGCCCCAGGCGGCTGCGGCTGCGGCTGCGGCAGCGTCGCCGTCGTCGTCAGCGGCATCCTCATCTGAGGGCATGACGGCGTCCCAGCCCCAGGCGCCGGCGGCGGAGGCGGCATCCTCCTCCGCGGGAGCTGCCGACTTCAGGGAGTTGGCTCCGATGCACGGGGATCTGTTGAACAACATGTTCTTCCTCTGACGACAGCTTTTCGCCGCATATGGTCTCTCGTTGCCAGGTACTCCTCGTATGGTCCTGGAACTTGCGTTTGATTTTCTGGTTGTGATACCTGTCCGTGTCCCGGTGTCTGTTCTTTAACTGCCTGGAGTCTCTCATGTCTTTGGGTGGTTTATCCATAGTAAATTTT]
consensusID : consensus_4068#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence
[ATTCGGCTCGAGCTCGTGCCNAATTCGGCACGANGAACCGCAACGTGCTCNCCGGCACGGTGGTGGACACCGGCGTGGTCGACNCGGCGGCNTACGACTTCTACCTGTGCNGCCACAACCGGCTNATCNGGNCNAGCCGGCCGANGCACTACTACANCCTTCTGGACGAGCACGGCTTCGCCTCCNACGACCTGCNTAANCTGGTGTTCAACCTCTGCTTCGTCTTCNCCCGCTGCACCAAGCCGGTGTCNCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTNCTACNAAGGCCTGATGATGTCNCANCCNCCACCGTCTTCCGCGGCGTCNGCGTCNTCNGCATCCTCCTCCNGCNCCNGCGCTTCCGACTTCANGAGCTTCCCGGGGCCTGCNCCAAGGATCTGGTGGACAACATNTTCTTCNTCTGACACANCCTTTCCTCCATNGTCCGGTGGTCT]
[+] EMBL BE228932 [ATTCGGCTCGAGCTCGTGCCNAATTCGGCACGANGAACCGCAACGTGCTCNCCGGCACGGTGGTGGACACCGGCGTGGTCGACNCGGCGGCNTACGACTTCTACCTGTGCNGCCACAACCGGCTNATCNGGNCNAGCCGGCCGANGCACTACTACANCCTTCTGGACGAGCACGGCTTCGCCTCCNACGACCTGCNTAANCTGGTGTTCAACCTCTGCTTCGTCTTCNCCCGCTGCACCAAGCCGGTGTCNCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTNCTACNAAGGCCTGATGATGTCNCANCCNCCACCGTCTTCCGCGGCGTCNGCGTCNTCNGCATCCTCCTCCNGCNCCNGCGCTTCCGACTTCANGAGCTTCCCGGGGCCTGCNCCAAGGATCTGGTGGACAACATNTTCTTCNTCTGACACANCCTTTCCTCCATNGTCCGGTGGTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4068#0 CTTTTTAGCGAAATCCGAGAAAAAAATTGCCTGCAAAAAAAAAAATCGAAACGTCGTTCT 60
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GATCGATCGGCCGTTCGAGTTCACGGCGGAGATGGAGCACGAGCGCGGTGGCGGTGGCCG 120
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CGGCCGCGGGAGGGGTCGCGGTGGCGGGCGTGGCGGCGGTGGCGGCGATGGTCGCGGAGG 180
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CGGTTATGGTGGTGCTGGTGGTGGTGGTGTCGGCGGGCGCGGTGGGCGTGGGCCTCCTGG 240
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TGGTGGTGGTGGACGCGGGTACGAGCCCGGCGGCGGGCGTGGGTACGGTGGCGGCGGCGG 300
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CGGTGGTGGACGTGGGTATGGCGGCGGAGGCGGCGGTGGTGGGTACGAGTCCGGCGGTGG 360
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GCGTGGGTATGGCGGCGGTGGACGTGGGTATGAATCCGGCGGTGGGCGTGGACCTGGCGG 420
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CGGCGGCCGTGGGCACGAGTCCGGCGGTGGCGGTGGCCGCGGCGGGAACGTGTGGGCGCA 480
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GCCGGGGAGAGGGCGCGGAGGAGCCCCCGCCCCGGCGCCGGCGCCAGCACCAGCAGCGAG 540
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GAGGATCCAGGACGAGGGGGCCGCGAGGTCGTCGGGTACCGTTGAGCGCATTGCTTCTAC 600
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TGAGGTTGTAAGAGTACAACCACCTGCACCCCCAGTTGCTGTGTCTCGTAGTGGCACGCG 660
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TGTGCCAATGCGAAGACCTGATGGTGGAGGCTCAGTATCGAAAGCCAAGGTCAAATTGTT 720
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GGTGAACCATTTTATAGTTAAGTACCGACAGGCATCAACTGTTTTTCACTATGACATAGA 780
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CATCAAGCTTGATATAAGTTCCCCCAAGGCTTCAGACAAGGAGCTATCCAAGGGAGATTT 840
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TCTTACTGTCAAGGACGAGCTCTTCAAGGATGAGAGCTTTCGGCGGCTTTCATCAGCTGT 900
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TGCTTATGATGGAAAAAGAAATTTATTTACTTGTGCTGAGCTACCAGATGGTTTGTTTCG 960
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TGTCAAAGTCCGTTCACGGACTTACATTGTATCTGTGGAGTTCAAGAAGAAGCTTCCTTT 1020
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GAGCCAACTCTCGGAACTGCCTGTGCCCAGAGAGGTCTTGCAGGGGCTTGATGTCATTGT 1080
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GCGTGAGGCCTCTAGCTGGCGCAAGATTATCATTGGTCAGGGATTTTACTCGCAGGGCCG 1140
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CAGTGTGCCCATTGGGCCGGATGTTGTAGCTCTCAAAGGAACCCAGCAGACCCTGAAATG 1200
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CACTCAGAAAGGACTGATCCTTTGTGTGGACTATTCGGTTATGCCGTTTCGCAAAGCTGG 1260
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 ACCTGTGTTGGATCTTGTTCAGAAGTCTGTGAGATACCTTGACTACAGGACAACACTAAA 1320
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CAAACACCAATTGGACACTTTGAAGAATGAACTCAAAGGCCAGCGTGTCACTGTAAATCA 1380
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 TAGGAGGACAAAGCAGAAGTACATTGTTAAAGGTTTGACTGATAAACCTGCAAGTCAGAT 1440
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 AACTTTTGTAGATTCTGAATCAGGACAGACCAAGAAGCTTCTTGATTACTATTCGCAGCA 1500
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 GTATGGCAAGGTTATTGAGTATCAAATGCTTCCATGCTTGGATTTGAGCAAGAGCAAGGA 1560
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 CAAGCAAAACTATGTGCCGATTGAATTGTGTGATCTTCTTGAAGGGCAGAGATACCCAAA 1620
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 AGCAAGCTTAAATAGGAATTCTGATAAAACACTGAAAGAAATGGCTTTGATCCCTGCCTC 1680
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 AAGTAGGAAGGAGGAGATTCTGGAGTTGGTGAATGCTGACGATGGGCCTTGCAGGGGTGA 1740
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ------------------------------------------------------------
consensus_4068#0 AATTGCTCAGCAGTTCGGGATTTCTTTGGATGTACAAATGATGGAAGTCACTGGTAGGAC 1800
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 --------------------------TAGATGCAGCAATGATGGAAGTCACTGGTAGGAT 34
consensus_4068#0 CCTTCCTCCTCCCAGCCTAAAACTTGGCAC------CTCCAGTGGCCAACCCCCCAAATT 1854
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 TCTTGCTCCCCCCACCCTAGAACTTGGCACTGGCACCTCCAGAGGCCAGACCTTCAAATT 94
consensus_4068#0 CAATATTGATCAGCCTAACTGCCAGTGGAACCTTACGAGGAAAAGACTAGCAGAGGGCGG 1914
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 CACTATTCATCAGGATGACTGCCAGTGGAACTGGAAGCTTAAAAAATACGATAAACGAGT 154
consensus_4068#0 GGTGCTACAGTGCTGGGGCGTTGTGGACTTCAGTGCAGATTCTGGGCAGTACGCCCTGAA 1974
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 AGTAGCACATGGCGGGACTCTTAACTGCTGGGGCGTCGTCGATTTCAGTGAAGGCGACCT 214
consensus_4068#0 TGGGAACATGTTTATTGACAAGATTGTCAGGAAGTGCTGCGACCTTGGCGTACAGATGAA 2034
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 AGAGAGCAAGTTTATTGACAAGGTTGTCAGGAAGTGCTCCGCCCTTGGCATGGTCATGAC 274
consensus_4068#0 CCGTAACCCATGCATTGTGCAACTGTTAGATATGGAGGTGCTATCCGATCCACATCAGCT 2094
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 CCGTAAACCATGCTATGAGCATGTGTCAAATATGGAAGTGCTATCCGATCCAAAGAGCCT 334
consensus_4068#0 CTTCGAGGAGCTTAACAAAGCTAAGCAGGCGGCAGCCAGTAAGAAACAGAAGCTGCAGCT 2154
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 CAGAGATGCGCTTATCGAAGCGAAGCGTGCCGCGGAGGAGGAAGACAAGAAGCTGCAGCT 394
consensus_4068#0 CCTCTTCTGCCCAATGTCTGATCAGCATCCTGGGTACAAGACGCTGAAGCTTATCTGCGA 2214
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 CCTCTTCTGCCCGATGCTCAACCGGTGCCATGGGTACAAGACCCTGAAGTTGATGTGCGA 454
consensus_4068#0 GACGCAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCTTCCTCGCGAA---CAAACAACA 2271
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 GACGGAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCACCGCCGCAAAACTCGACGAAAA 514
consensus_4068#0 GGGACAGGACCAGTACATGTCCAACCTTGCTCTGAAGATCAACGGCAAGATTGGAGGAAG 2331
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ACGACAGGACCAGTACATTACCAACCTTGCTCTGAAGATCAACGGCAAGATCGGGGGTAG 574
consensus_4068#0 CAACATCCAACTGTTTGGTGAATCGCTCCCGCGGATCTCCGGCGCGCCATACATGTTCAT 2391
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 CAACATGCAGCTCGACCCGGACTCGATCCCAGTGGTGTCCGCCAAGGATTTCATGTTCAT 634
consensus_4068#0 CGGCGCCGACGTGAATCACCCATCGCCGGGGAACGTC------GAGAGCCCGTCGATTGC 2445
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 CGGTGCGGACGTGAACCACCCTCCGCCTGGGAATGTCAGTAAGGACATCCCGTCCATAGC 694
consensus_4068#0 AGCAGTGGTGGCCTCGGTGGATCAAGGCGCCAGCAAGTACGTGCCAAGAATCCGCGCTCA 2505
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 AGCCGTGGTGGCCTGCGTTGATAAAGGCGCCAGCAAGTACGTGACAAGGATCCGCGCCCA 754
consensus_4068#0 GCCTCACCGCTGCGAGGTGATCCAGCACCTCGGCGACATGTGCAAGGAGCTCATCGGCGT 2565
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 GTATCACCGGTGCGAGATGATCCAGAACCTCGGTGATATCTGCAAGGAGCTCATCGGCGC 814
consensus_4068#0 GTTCGAGAAGCGGAACCGCGTGAAGCCCCAGAGGATCATCTACTTCCGCGACGGCGTCAG 2625
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 GTATGAGAAGGTAAACAAGAAGAAGCCTGATAGCATCATCTACTTCCGCGACGGCGTCAG 874
consensus_4068#0 CGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAAGGCGATCAA 2685
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 TGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAATAAGATCAT 934
consensus_4068#0 GACCAAGGACTACTCCCCGACGATCACCGTGATCGTGGCCAAGAAGCGGCACCACACCAG 2745
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 GGTGGGTGACTAC---CCGAAGATCACCGTGATCGTTGCCAAGAAGAGGCACCACACGCG 991
consensus_4068#0 GCTGTTCCCCAAGGACCTGAACCAGCAGCAG-ACCAAGAACGGCAACGTGCTCCCCGGCA 2804
consensus_4068#2 ---ATTCGGCTCGAGCTCGTGCCNAATTCGGCACGANGAACCGCAACGTGCTCNCCGGCA 57
consensus_4068#1 GCTGTTCCCCAAGGACAGGAACCAGCGGCAG-ACCAAGAACGGCAACGTGCTCCCCGGCA 1050
*** * * * * ** * * ** * **** *********** ******
consensus_4068#0 CGGTGGTGGACACCGGCGTGGTCGACCCGGCGGCGTACGACTTCTACCTGTGCAGCCACA 2864
consensus_4068#2 CGGTGGTGGACACCGGCGTGGTCGACNCGGCGGCNTACGACTTCTACCTGTGCNGCCACA 117
consensus_4068#1 CGGTGGTGGACACCGACGTGGTCGACCCGACGGCGTACGACTTCTACCTGTGCAGCCACA 1110
*************** ********** ** **** ****************** ******
consensus_4068#0 ACGGGCTGATCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCT 2924
consensus_4068#2 ACCGGCTNATCNGGNCNAGCCGGCCGANGCACTACTACANCCTTCTGGACGAGCACGGCT 177
consensus_4068#1 AGGGGGAGGTCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCT 1170
* ** ** ** * ********** *********** ********************
consensus_4068#0 TCGCCTCCAACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCA 2984
consensus_4068#2 TCGCCTCCNACGACCTGCNTAANCTGGTGTTCAACCTCTGCTTCGTCTTCNCCCGCTGCA 237
consensus_4068#1 TCGCCTCCGACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCA 1230
******** ********* ** ******* ******************* *********
consensus_4068#0 CCAAGCCGGTGTCGCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCA 3044
consensus_4068#2 CCAAGCCGGTGTCNCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCA 297
consensus_4068#1 CCAAGCCGGTGTCGCTGGCCACTCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCA 1290
************* ******** *************************************
consensus_4068#0 GGCTCTACTACGAGGGCATGATGATGTCGCAGCCGCCACCGTCTTCCGCGGCGTCGGCGT 3104
consensus_4068#2 GGCTCTNCTACNAAGGCCTGATGATGTCNCANCCNCCACCGTCTTCCGCGGCGTCNGCGT 357
consensus_4068#1 GGCTCTACTACGAGGGCATGATGATGTTGCAGCCGGCGGCGT---CAGCGGCATCTGCCT 1347
****** **** * *** ********* ** ** * *** * ***** ** ** *
consensus_4068#0 CGTCGGCATCCTCCTCCGGCGCCGGCGCTTCCGACTTCAGGAGCTTCC-CGGCGC-TGCA 3162
consensus_4068#2 CNTCNGCATCCTCCTCCNGCNCCNGCGCTTCCGACTTCANGAGCTTCC-CGGGGCCTGCN 416
consensus_4068#1 CCGAGGC-CATGATGCCGGCGGCACAGCCCCAGGCGGCTGCGGCTGCGGCTGCGGCAGCG 1406
* ** ** ** * ** * * * * *** * * * * **
consensus_4068#0 C-GAGGATCTGGTGGACAACATGTTCTTC-----ATCTGACGACAGCCTTTCGTCG--CA 3214
consensus_4068#2 CCAAGGATCTGGTGGACAACATNTTCTTC-----NTCTGAC-ACANCCTTTCCTC---CA 467
consensus_4068#1 TCGCCGTCGTCGTCAGCGGCATCCTCATCTGAGGGCATGACGGCGTCCCAGCCCCAGGCG 1466
* * ** * *** ** ** **** * ** * * *
consensus_4068#0 TGGTC--CGGTGGTCTCTCTCTGTTCTTAGTTTACCTCTTACTGCGTGGAGTCTCAGGTC 3272
consensus_4068#2 TNGTC--CGGTGGTCT-------------------------------------------- 481
consensus_4068#1 CCGGCGGCGGAGGCGGCATCCTCCTCCGCGGGAGCTGCCGACTTCAGGGAGTTGGCTCCG 1526
* * *** **
consensus_4068#0 ATAGACTCATTAGTCACAGACTCACAGGTTGTCTATCTTTTGACTTTTGTTGACCGTGTC 3332
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 ATGCACG-GGGATCTGTTGAACAACATGTTCTTCCTCTGACGACAGCTTTTCGCCGCATA 1585
consensus_4068#0 GTCGGTCTTGGTAGTTGGTAGTCTTATACATACTGTTGAGGCTGCATTATGGTTGCACAA 3392
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 TGGTCTCTCGTTGCCAGGTACTCCT-CGTATGGTCCTGGAACTTGCGTTTGATTTTCTGG 1644
consensus_4068#0 GAAAGTTTAAGAGTACTATACTGGTACTCTGTATTTTGCAATTCTCG--TGCGGATGCTA 3450
consensus_4068#2 ------------------------------------------------------------
consensus_4068#1 TTGTGATACCTGTCCGTGTCCCGGTGTCTGTTCTTTAACTGCCTGGAGTCTCTCATGTCT 1704
consensus_4068#0 TGGAGTA-------------------- 3457
consensus_4068#2 ---------------------------
consensus_4068#1 TTGGGTGGTTTATCCATAGTAAATTTT 1731
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||