cluster # 408

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Oryza sativa
cluster # 408 cluster # 408 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_408#0 length = 907 sequences # 2

consensusID : consensus_408#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 907
fasta sequence

                              [TCACGAAGGCGGCGGCGGCTTCCTTCCTCGTCTCCCCACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGCCAGCGAACTTCGTAGCCATGGCGTGGGAGGAGGAGGCGGCGGTGGAAGAGGAGTACGAGTACGGGGAGGAGATGGAGGGGTCGGGGTCGGAGGCGGAGGACGTGGTGGTGGGGCAGATGCCGACGGTGATGGTGCCCAAGCACATCAACAAACGCGCCCTCAAGAACAAGGCCCTCTCCGTCTCCCTCGACAAGAAAGCCCTCAAGGATTTCGTGACCGGATTTCACAAGAGGAAGAAGAAGAGGAGAAAGGAGGCGCAGAAGATTTTGCAGGAGAAGGAGAGAAAGAAGCGAATCGAGGAGCGCAAGCGGAGAAAGCAAGAGAAAGAAATTGCGCTGTATGGAAGAGTCCTGTCATCAGATAATGCTGATGGTGAAGATGTTGAGAATGATGGTGATGAAATGGAAACTGATGATTTGCCTGAACCTGAAGTAAAAACATACGAAGATGGTGGGACTAAAATTACGGTCACCACGAGCGAAATCACTCCTGAAGATGACGATGAAGACCTTGGCCCGAAAAGGATCACCCCTGCATCGACGGGCTACGCCAACAAGAGCGTCTCCAAGAAGAGTGCTAGTCTAGGTGTAAAGAAGAAGCCATCGAAGAGAACCTTCAGGAATAAGAGTAAATCTAAGAAGGGCGACCAGAAGCGAGGTGCTGCAAAGGGTAAACGGAAGAACAAAGGGAGGAAGTGAGTGAATG-TTTCTGTAACCACTCTGTAGAAATGTTTGCACCTTTGGCCAGGGCCAGAGGCCAGAGCTGCCGTTTTTGCCAGACACGATGAACTTTGTACTCGGTTCCTGATTCATCATCCAAATGAGGCTAATCATG]

[+] EMBL AK099434             [TCACGAAGGCGGCGGCGGCTTCCTTCCTCGTCTCCCCACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAGCCAGCGAACTTCGTAGCCATGGCGTGGGAGGAGGAGGCGGCGGTGGAAGAGGAGTACGAGTACGGGGAGGAGATGGAGGGGTCGGGGTCGGAGGCGGAGGACGTGGTGGTGGGGCAGATGCCGACGGTGATGGTGCCCAAGCACATCAACAAACGCGCCCTCAAGAACAAGGCCCTCTCCGTCTCCCTCGACAAGAAAGCCCTCAAGGATTTCGTGACCGGATTTCACAAGAGGAAGAAGAAGAGGAGAAAGGAGGCGCAGAAGATTTTGCAGGAGAAGGAGAGAAAGAAGCGAATCGAGGAGCGCAAGCGGAGAAAGCAAGAGAAAGAAATTGCGCTGTATGGAAGAGTCCTGTCATCAGATAATGCTGATGGTGAAGATGTTGAGAATGATGGTGATGAAATGGAAACTGATGATTTGCCTGAACCTGAAGTAAAAACATACGAAGATGGTGGGACTAAAATTACGGTCACCACGAGCGAAATCACTCCTGAAGATGACGATGAAGACCTTGGCCCGAAAAGGATCACCCCTGCATCGACGGGCTACGCCAACAAGAGCGTCTCCAAGAAGAGTGCTAGTCTAGGTGTAAAGAAGAAGCCATCGAAGAGAACCTTCAGGAATAAGAGTAAATCTAAGAAGGGCGACCAGAAGCGAGGTGCTGCAAAGGGTAAACGGAAGAACAAAGGGAGGAAGTGAGTGAATG TTTCTGTAACCACTCTGTAGAAATGTTTGCACCTTTGGCCAGGGCCAGAGGCCAGAGCTGCCGTTTTTGCCAGACACGATGAACTTTGTACTCGGTTCCTGATTCATCATCCAAATGAGGCTAATCATG]
[+] EMBL C97280               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTGAAGATGACGATGAAGACCTTGGCCCGAAAAGGNTCACCCCTGCNTCGACGGGCTACGCCAACAAGAGCGTCTCCAAGAAGAGTGCTAGTNTAGGTGTAAAGAAGAAGCCATCGAAGAGAACCTTCAGGAATAAGAGTAANTCTAAGAAGGGCGACCAGAAGCNAGGTGCTGCAAAGGNTAAACGGAAGANCAAAGGGAGGAAGTGAGTGANTGTTTTCTTTANCCACTCTGTAGAAATNTTTGCACCTTTGGCCAGGGCCAGAGGCNAGAGCTG                                                                     ]




>consensus_408#0
TCACGAAGGCGGCGGCGGCTTCCTTCCTCGTCTCCCCACAAGAGAGAGAGAGAGAGAGAG
AGAGAGAGCGAGCCAGCGAACTTCGTAGCCATGGCGTGGGAGGAGGAGGCGGCGGTGGAA
GAGGAGTACGAGTACGGGGAGGAGATGGAGGGGTCGGGGTCGGAGGCGGAGGACGTGGTG
GTGGGGCAGATGCCGACGGTGATGGTGCCCAAGCACATCAACAAACGCGCCCTCAAGAAC
AAGGCCCTCTCCGTCTCCCTCGACAAGAAAGCCCTCAAGGATTTCGTGACCGGATTTCAC
AAGAGGAAGAAGAAGAGGAGAAAGGAGGCGCAGAAGATTTTGCAGGAGAAGGAGAGAAAG
AAGCGAATCGAGGAGCGCAAGCGGAGAAAGCAAGAGAAAGAAATTGCGCTGTATGGAAGA
GTCCTGTCATCAGATAATGCTGATGGTGAAGATGTTGAGAATGATGGTGATGAAATGGAA
ACTGATGATTTGCCTGAACCTGAAGTAAAAACATACGAAGATGGTGGGACTAAAATTACG
GTCACCACGAGCGAAATCACTCCTGAAGATGACGATGAAGACCTTGGCCCGAAAAGGATC
ACCCCTGCATCGACGGGCTACGCCAACAAGAGCGTCTCCAAGAAGAGTGCTAGTCTAGGT
GTAAAGAAGAAGCCATCGAAGAGAACCTTCAGGAATAAGAGTAAATCTAAGAAGGGCGAC
CAGAAGCGAGGTGCTGCAAAGGGTAAACGGAAGAACAAAGGGAGGAAGTGAGTGAATGTT
TCTGTAACCACTCTGTAGAAATGTTTGCACCTTTGGCCAGGGCCAGAGGCCAGAGCTGCC
GTTTTTGCCAGACACGATGAACTTTGTACTCGGTTCCTGATTCATCATCCAAATGAGGCT
AATCATG

clustalw multiple alignements is not computed in this case