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Oryza sativa
cluster # 4132 cluster # 4132       Sequences # 3       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4132#0 length = 2983 sequences # 1  
consensus_4132#1 length = 618 sequences # 1  
consensus_4132#2 length = 481 sequences # 1  

consensusID : consensus_4132#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2983
fasta sequence
                              [AGCCGCGCCGAGTGCCGAACTGCCGCTGCGCTCGCCTTCGCTCCGCCTCAACCACGTTGCCTCGGGCCTCTTGCCACCAGCGGAGCCATCAGATCTGCAGCTCTCTCCGTGTCCCCGGCCGCGTCCGGCGTGCTCTCTGCGCAGGTGATGTCGCAGCAGTAGATAGATGAGGCGATGAGCCATCCCTAGAACTGAATGCGGCTGTGCATAGCGGAGAGCGTATCCTTTATGGCTTTGTGTATGTGTATATTTTTTAAGGAAAGTAAGCTTACTGCTTACGAGATCACATGGTACTGTGGTAGTGTAAATCATGCGCCAAAGGATCAAGAGAAATGTGCACTAAATTGATATTGTGTATATCATATCCTTACTTGGGCCCTTCTGAATAACTGAACGCAGCTTGCCATCAAATAAAGGTACTGGTATCGTACTTCTTTCTAAATGAACCTACTTAGTTTCATGCAAGAGTTCATACAGACACTAGAATATTCAACAGATTCATTACAATTAAGAACAAGTTGATATATTATTGCCCTAAGAAGAATTCATAACATGCTCGAACTGATCTTTTCTCTATGGTATAATAATTCTTCTTCTTGCAAAATAAAATTAGTGTTGTTATTGGTCACCATTAGTAGGTTGTCTGATTATCGCGGTGGTTGTATTCTAGGAGAACTTCCAGTATTTAAATCATTATTAGTGAGCTGGTTCTTTCAAGGAAAGAGTTCCTTTCTGGTCCTTACAAATTTTCCAACGATAGGTGTAGCAGTCTAGCACCTTTCATCATTATCTTAATTCACTTGTTTAGGATCAAAATGGCCATATTATATAGTATTAACTACTCGTAGGTGAGGCACCCTCAAATCCTATTTGCCATTTTAATCTCTGATACTCAGTGCCTTGAGGGAATTTTTAGCAAACATTCTGCGGACTGTGCTGATTATCATTGATTTGTATTATGTTTACATAACTACCACACATGATCATGGATGACTAGGTAAGTTACAGGATGTCATACTCAAGTCAACTATTTATTCTTGGATTCTATATTCTCTTTAAGCTTTGTACATTATCTGGGCAAATCAGCTAGCAGCCTAGCATATTAATTCAACCTTACTATTCCAGGGAACAACAAATACTTAAATTCGTAAATTTATTTGTGGTCATATCGTGAGACACTACTCGTTGTCTAAAGCATGATGGAAGGGTCTTTCCTGGTTAGATCTCTAACGGGTGAAAAAATGTGAAGAAATAGTTGTTGGATGCTGTTGCTGTATTTCCCAACAGATGACTACACCAGCAACACAACTACAAATTATTCTTAGCTACGTGGAAATATATACGTGGAGAATGACACGTCAGTATGAGGAGATTCTCAGGAGACTCACCAGAAGTGCAAAGTTTTTGCTGAATAGTGGACGACAACCTCTGCTCCAGTTTGTTGGATCTCTCATCTCATATCCAGGGGGACAAGAACACTTGAAGCTTGGCAAGAACTCACATATACCATTCTCGCCACACAGTCCATGCACATCACACAATTTTGCTATAGCCTGCCATGAGACTTTCCAGCTCCCATCTGATGCATTCAAACTATACATTCTTAGATTCCCATCATAATCAAGCGTCAGCCTTCTGTTGATTCCAGCACCCCAATCAGCAGCCTTGATATCCAGCTTATCACTTGAGAGGAAGTGTCCTTCAGTGTCAAGGATTGCATTCCTGGAGCCATTGTAGCTAGTCCTCCCAATATCAAACACTGAGTAGTCTGGACTTGGCCAATAGATGCTAGATATTTCTGGCCCATCATACATGAGGCGTAACACATTGTCATTGTCAAAATAGAGGTTGAAATAACCAGAGACCAGTCTTGTACCTTTGGTGAGAGGCTGTAATGGAAGCAAGGTATCCGTTGGTGCCCAGAAGCTTTGCCATAACTTCGTGCCTGTGGAGTCTCTGATGACGAGATTGCCAGTGTCAAGAAGGACAGCCGTTGTGCCCTTGCCAGAGCTCGTCTTGCTGTCCCAATTTGCGGTGCCATTGACATCAGCGAGGACCAGGTTACCTTCATGGTTCAGTGTCACCTTAGAGCCATGGCCATTTACCGGGGACTTGGGGTTTGCAGACCATACGACGGTCCTATTCTTGCTGTTGGTGAACCAGATGGAGAAGGAGAAAGCATTCCCTCCAACTTCATAGAAGCCACAAGAGAAATCGGCGTTTGGTGAGGTAAGGAAGGTTTGCTTATGCTCTTCAACAAATAAGGATGAGCCGGTGCTTAGCATCAACAGGGGTGAAGCATATGAGAATGGCAGTACACTGATCAAGGGAAGAATGACTAGACAGAGTAATCTTGCCATTTTGTTTTCTTTGTGTTCAGGCCATCAGATCATGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCATTCAGTCCTGGCGGCTTTCAGCTTAAATATTTGACATGTTTCTTGTCTTGGTTACAATCTTCATGACAGCTTTCACATTTTTGAGAGCTGCCTCATTATTTCTCAATACCAACATTCTGTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAGAGTAGGACATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCGGTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACATTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCCCTCCTGTATCTTGTCCCCTTCGTGTTTTTGATTTTTCGGCCCGCTCTGTAAATACTTTATTCCTTAATACAAAGATGCGTCCCT]

[+] EMBL AK067957             [AGCCGCGCCGAGTGCCGAACTGCCGCTGCGCTCGCCTTCGCTCCGCCTCAACCACGTTGCCTCGGGCCTCTTGCCACCAGCGGAGCCATCAGATCTGCAGCTCTCTCCGTGTCCCCGGCCGCGTCCGGCGTGCTCTCTGCGCAGGTGATGTCGCAGCAGTAGATAGATGAGGCGATGAGCCATCCCTAGAACTGAATGCGGCTGTGCATAGCGGAGAGCGTATCCTTTATGGCTTTGTGTATGTGTATATTTTTTAAGGAAAGTAAGCTTACTGCTTACGAGATCACATGGTACTGTGGTAGTGTAAATCATGCGCCAAAGGATCAAGAGAAATGTGCACTAAATTGATATTGTGTATATCATATCCTTACTTGGGCCCTTCTGAATAACTGAACGCAGCTTGCCATCAAATAAAGGTACTGGTATCGTACTTCTTTCTAAATGAACCTACTTAGTTTCATGCAAGAGTTCATACAGACACTAGAATATTCAACAGATTCATTACAATTAAGAACAAGTTGATATATTATTGCCCTAAGAAGAATTCATAACATGCTCGAACTGATCTTTTCTCTATGGTATAATAATTCTTCTTCTTGCAAAATAAAATTAGTGTTGTTATTGGTCACCATTAGTAGGTTGTCTGATTATCGCGGTGGTTGTATTCTAGGAGAACTTCCAGTATTTAAATCATTATTAGTGAGCTGGTTCTTTCAAGGAAAGAGTTCCTTTCTGGTCCTTACAAATTTTCCAACGATAGGTGTAGCAGTCTAGCACCTTTCATCATTATCTTAATTCACTTGTTTAGGATCAAAATGGCCATATTATATAGTATTAACTACTCGTAGGTGAGGCACCCTCAAATCCTATTTGCCATTTTAATCTCTGATACTCAGTGCCTTGAGGGAATTTTTAGCAAACATTCTGCGGACTGTGCTGATTATCATTGATTTGTATTATGTTTACATAACTACCACACATGATCATGGATGACTAGGTAAGTTACAGGATGTCATACTCAAGTCAACTATTTATTCTTGGATTCTATATTCTCTTTAAGCTTTGTACATTATCTGGGCAAATCAGCTAGCAGCCTAGCATATTAATTCAACCTTACTATTCCAGGGAACAACAAATACTTAAATTCGTAAATTTATTTGTGGTCATATCGTGAGACACTACTCGTTGTCTAAAGCATGATGGAAGGGTCTTTCCTGGTTAGATCTCTAACGGGTGAAAAAATGTGAAGAAATAGTTGTTGGATGCTGTTGCTGTATTTCCCAACAGATGACTACACCAGCAACACAACTACAAATTATTCTTAGCTACGTGGAAATATATACGTGGAGAATGACACGTCAGTATGAGGAGATTCTCAGGAGACTCACCAGAAGTGCAAAGTTTTTGCTGAATAGTGGACGACAACCTCTGCTCCAGTTTGTTGGATCTCTCATCTCATATCCAGGGGGACAAGAACACTTGAAGCTTGGCAAGAACTCACATATACCATTCTCGCCACACAGTCCATGCACATCACACAATTTTGCTATAGCCTGCCATGAGACTTTCCAGCTCCCATCTGATGCATTCAAACTATACATTCTTAGATTCCCATCATAATCAAGCGTCAGCCTTCTGTTGATTCCAGCACCCCAATCAGCAGCCTTGATATCCAGCTTATCACTTGAGAGGAAGTGTCCTTCAGTGTCAAGGATTGCATTCCTGGAGCCATTGTAGCTAGTCCTCCCAATATCAAACACTGAGTAGTCTGGACTTGGCCAATAGATGCTAGATATTTCTGGCCCATCATACATGAGGCGTAACACATTGTCATTGTCAAAATAGAGGTTGAAATAACCAGAGACCAGTCTTGTACCTTTGGTGAGAGGCTGTAATGGAAGCAAGGTATCCGTTGGTGCCCAGAAGCTTTGCCATAACTTCGTGCCTGTGGAGTCTCTGATGACGAGATTGCCAGTGTCAAGAAGGACAGCCGTTGTGCCCTTGCCAGAGCTCGTCTTGCTGTCCCAATTTGCGGTGCCATTGACATCAGCGAGGACCAGGTTACCTTCATGGTTCAGTGTCACCTTAGAGCCATGGCCATTTACCGGGGACTTGGGGTTTGCAGACCATACGACGGTCCTATTCTTGCTGTTGGTGAACCAGATGGAGAAGGAGAAAGCATTCCCTCCAACTTCATAGAAGCCACAAGAGAAATCGGCGTTTGGTGAGGTAAGGAAGGTTTGCTTATGCTCTTCAACAAATAAGGATGAGCCGGTGCTTAGCATCAACAGGGGTGAAGCATATGAGAATGGCAGTACACTGATCAAGGGAAGAATGACTAGACAGAGTAATCTTGCCATTTTGTTTTCTTTGTGTTCAGGCCATCAGATCATGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCATTCAGTCCTGGCGGCTTTCAGCTTAAATATTTGACATGTTTCTTGTCTTGGTTACAATCTTCATGACAGCTTTCACATTTTTGAGAGCTGCCTCATTATTTCTCAATACCAACATTCTGTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAGAGTAGGACATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCGGTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACATTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCCCTCCTGTATCTTGTCCCCTTCGTGTTTTTGATTTTTCGGCCCGCTCTGTAAATACTTTATTCCTTAATACAAAGATGCGTCCCT]


>consensus_4132#0 AGCCGCGCCGAGTGCCGAACTGCCGCTGCGCTCGCCTTCGCTCCGCCTCAACCACGTTGC CTCGGGCCTCTTGCCACCAGCGGAGCCATCAGATCTGCAGCTCTCTCCGTGTCCCCGGCC GCGTCCGGCGTGCTCTCTGCGCAGGTGATGTCGCAGCAGTAGATAGATGAGGCGATGAGC CATCCCTAGAACTGAATGCGGCTGTGCATAGCGGAGAGCGTATCCTTTATGGCTTTGTGT ATGTGTATATTTTTTAAGGAAAGTAAGCTTACTGCTTACGAGATCACATGGTACTGTGGT AGTGTAAATCATGCGCCAAAGGATCAAGAGAAATGTGCACTAAATTGATATTGTGTATAT CATATCCTTACTTGGGCCCTTCTGAATAACTGAACGCAGCTTGCCATCAAATAAAGGTAC TGGTATCGTACTTCTTTCTAAATGAACCTACTTAGTTTCATGCAAGAGTTCATACAGACA CTAGAATATTCAACAGATTCATTACAATTAAGAACAAGTTGATATATTATTGCCCTAAGA AGAATTCATAACATGCTCGAACTGATCTTTTCTCTATGGTATAATAATTCTTCTTCTTGC AAAATAAAATTAGTGTTGTTATTGGTCACCATTAGTAGGTTGTCTGATTATCGCGGTGGT TGTATTCTAGGAGAACTTCCAGTATTTAAATCATTATTAGTGAGCTGGTTCTTTCAAGGA AAGAGTTCCTTTCTGGTCCTTACAAATTTTCCAACGATAGGTGTAGCAGTCTAGCACCTT TCATCATTATCTTAATTCACTTGTTTAGGATCAAAATGGCCATATTATATAGTATTAACT ACTCGTAGGTGAGGCACCCTCAAATCCTATTTGCCATTTTAATCTCTGATACTCAGTGCC TTGAGGGAATTTTTAGCAAACATTCTGCGGACTGTGCTGATTATCATTGATTTGTATTAT GTTTACATAACTACCACACATGATCATGGATGACTAGGTAAGTTACAGGATGTCATACTC AAGTCAACTATTTATTCTTGGATTCTATATTCTCTTTAAGCTTTGTACATTATCTGGGCA AATCAGCTAGCAGCCTAGCATATTAATTCAACCTTACTATTCCAGGGAACAACAAATACT TAAATTCGTAAATTTATTTGTGGTCATATCGTGAGACACTACTCGTTGTCTAAAGCATGA TGGAAGGGTCTTTCCTGGTTAGATCTCTAACGGGTGAAAAAATGTGAAGAAATAGTTGTT GGATGCTGTTGCTGTATTTCCCAACAGATGACTACACCAGCAACACAACTACAAATTATT CTTAGCTACGTGGAAATATATACGTGGAGAATGACACGTCAGTATGAGGAGATTCTCAGG AGACTCACCAGAAGTGCAAAGTTTTTGCTGAATAGTGGACGACAACCTCTGCTCCAGTTT GTTGGATCTCTCATCTCATATCCAGGGGGACAAGAACACTTGAAGCTTGGCAAGAACTCA CATATACCATTCTCGCCACACAGTCCATGCACATCACACAATTTTGCTATAGCCTGCCAT GAGACTTTCCAGCTCCCATCTGATGCATTCAAACTATACATTCTTAGATTCCCATCATAA TCAAGCGTCAGCCTTCTGTTGATTCCAGCACCCCAATCAGCAGCCTTGATATCCAGCTTA TCACTTGAGAGGAAGTGTCCTTCAGTGTCAAGGATTGCATTCCTGGAGCCATTGTAGCTA GTCCTCCCAATATCAAACACTGAGTAGTCTGGACTTGGCCAATAGATGCTAGATATTTCT GGCCCATCATACATGAGGCGTAACACATTGTCATTGTCAAAATAGAGGTTGAAATAACCA GAGACCAGTCTTGTACCTTTGGTGAGAGGCTGTAATGGAAGCAAGGTATCCGTTGGTGCC CAGAAGCTTTGCCATAACTTCGTGCCTGTGGAGTCTCTGATGACGAGATTGCCAGTGTCA AGAAGGACAGCCGTTGTGCCCTTGCCAGAGCTCGTCTTGCTGTCCCAATTTGCGGTGCCA TTGACATCAGCGAGGACCAGGTTACCTTCATGGTTCAGTGTCACCTTAGAGCCATGGCCA TTTACCGGGGACTTGGGGTTTGCAGACCATACGACGGTCCTATTCTTGCTGTTGGTGAAC CAGATGGAGAAGGAGAAAGCATTCCCTCCAACTTCATAGAAGCCACAAGAGAAATCGGCG TTTGGTGAGGTAAGGAAGGTTTGCTTATGCTCTTCAACAAATAAGGATGAGCCGGTGCTT AGCATCAACAGGGGTGAAGCATATGAGAATGGCAGTACACTGATCAAGGGAAGAATGACT AGACAGAGTAATCTTGCCATTTTGTTTTCTTTGTGTTCAGGCCATCAGATCATGGTATGG AGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGT TGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGCCTAAA CCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCATTCAGTCCT GGCGGCTTTCAGCTTAAATATTTGACATGTTTCTTGTCTTGGTTACAATCTTCATGACAG CTTTCACATTTTTGAGAGCTGCCTCATTATTTCTCAATACCAACATTCTGTTTGGCGTGG ACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAGAGTAGGACATGGGCGGAA ATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCGGTTGGCTAGAGCCGCGATACCG GCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACATTCGTTGGGAGATTAGGCTTTT ATTTTCTTCCTCCTCCCCCCTCCTGTATCTTGTCCCCTTCGTGTTTTTGATTTTTCGGCC CGCTCTGTAAATACTTTATTCCTTAATACAAAGATGCGTCCCT



consensusID : consensus_4132#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence
                              [GGGAAAGCATTCCCTCCAACTTCATAGAAGCCCAAGAGAAATCGGCGTTTGGTGAGGCCATCAGATCNTGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCATTCAGTCCTGGCGGCTTTCAGCTTTCACATTTTTGAGAGCTGCCTCATTATTTCTCAATACCAACATTCTGTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAGAGTAGGACATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCGGTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACATTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCTCTCCTGTATCTTGTCCCCTTCGNGTTTTTGATTTTTCGGCCCCGCTCTGTAAATACTTTATTCCTTTAATACAAAGATACGTCCCTNGCGT]

[+] EMBL CB097115             [GGGAAAGCATTCCCTCCAACTTCATAGAAGCCCAAGAGAAATCGGCGTTTGGTGAGGCCATCAGATCNTGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCATTCAGTCCTGGCGGCTTTCAGCTTTCACATTTTTGAGAGCTGCCTCATTATTTCTCAATACCAACATTCTGTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAGAGTAGGACATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCGGTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACATTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCTCTCCTGTATCTTGTCCCCTTCGNGTTTTTGATTTTTCGGCCCCGCTCTGTAAATACTTTATTCCTTTAATACAAAGATACGTCCCTNGCGT]


>consensus_4132#1 GGGAAAGCATTCCCTCCAACTTCATAGAAGCCCAAGAGAAATCGGCGTTTGGTGAGGCCA TCAGATCNTGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTA TTTGATATCCACTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAA ATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCG CATTGCATTCAGTCCTGGCGGCTTTCAGCTTTCACATTTTTGAGAGCTGCCTCATTATTT CTCAATACCAACATTCTGTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTT CAACCAAAAGAGTAGGACATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCT TTGGCGGTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTC GCCACATTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCTCTCCTGTATCTTG TCCCCTTCGNGTTTTTGATTTTTCGGCCCCGCTCTGTAAATACTTTATTCCTTTAATACA AAGATACGTCCCTNGCGT



consensusID : consensus_4132#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence
                              [GGGGGTGCTTATCGTATTGAATGAGAGGCGACGGGAAAATCTTTAATATGGATCCCCCGGGCGGCCCGAATTCAGACGAGGGGTTTGGTGAGGCCATCATATCATGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCTTTTTGCAAATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCCATTCAGTCCTTGGCGGCTCTTCAGCCTTTCACATTCTCGTGAAGAGCTGCCTCATTTATTTTCTCACATAACCAACACTCCCTGGTCTCGGGCGGTGGGACCGAATTTTGGGAAATGAAAGGAAAACCATTCGGGGTTCTTCCCTCCCCCTAACTAGAAATTAGTGGAACTCTGGGGCCCGGAAAATTTGGCTCCTGGG]

[+] EMBL AA754132             [GGGGGTGCTTATCGTATTGAATGAGAGGCGACGGGAAAATCTTTAATATGGATCCCCCGGGCGGCCCGAATTCAGACGAGGGGTTTGGTGAGGCCATCATATCATGGTATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCTTTTTGCAAATTCTACATGCCTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCCATTCAGTCCTTGGCGGCTCTTCAGCCTTTCACATTCTCGTGAAGAGCTGCCTCATTTATTTTCTCACATAACCAACACTCCCTGGTCTCGGGCGGTGGGACCGAATTTTGGGAAATGAAAGGAAAACCATTCGGGGTTCTTCCCTCCCCCTAACTAGAAATTAGTGGAACTCTGGGGCCCGGAAAATTTGGCTCCTGGG]


>consensus_4132#2 GGGGGTGCTTATCGTATTGAATGAGAGGCGACGGGAAAATCTTTAATATGGATCCCCCGG GCGGCCCGAATTCAGACGAGGGGTTTGGTGAGGCCATCATATCATGGTATGGAGGAAGGT GTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCACTTGTGCAAAGGT TCTTTCGTGGAGTCAAATTTGAATCCTTTTTGCAAATTCTACATGCCTAAACCAGTAAAC CGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCCATTCAGTCCTTGGCGGCT CTTCAGCCTTTCACATTCTCGTGAAGAGCTGCCTCATTTATTTTCTCACATAACCAACAC TCCCTGGTCTCGGGCGGTGGGACCGAATTTTGGGAAATGAAAGGAAAACCATTCGGGGTT CTTCCCTCCCCCTAACTAGAAATTAGTGGAACTCTGGGGCCCGGAAAATTTGGCTCCTGG G



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4132#0      AGCCGCGCCGAGTGCCGAACTGCCGCTGCGCTCGCCTTCGCTCCGCCTCAACCACGTTGC 60
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CTCGGGCCTCTTGCCACCAGCGGAGCCATCAGATCTGCAGCTCTCTCCGTGTCCCCGGCC 120
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GCGTCCGGCGTGCTCTCTGCGCAGGTGATGTCGCAGCAGTAGATAGATGAGGCGATGAGC 180
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CATCCCTAGAACTGAATGCGGCTGTGCATAGCGGAGAGCGTATCCTTTATGGCTTTGTGT 240
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      ATGTGTATATTTTTTAAGGAAAGTAAGCTTACTGCTTACGAGATCACATGGTACTGTGGT 300
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AGTGTAAATCATGCGCCAAAGGATCAAGAGAAATGTGCACTAAATTGATATTGTGTATAT 360
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CATATCCTTACTTGGGCCCTTCTGAATAACTGAACGCAGCTTGCCATCAAATAAAGGTAC 420
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TGGTATCGTACTTCTTTCTAAATGAACCTACTTAGTTTCATGCAAGAGTTCATACAGACA 480
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CTAGAATATTCAACAGATTCATTACAATTAAGAACAAGTTGATATATTATTGCCCTAAGA 540
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AGAATTCATAACATGCTCGAACTGATCTTTTCTCTATGGTATAATAATTCTTCTTCTTGC 600
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AAAATAAAATTAGTGTTGTTATTGGTCACCATTAGTAGGTTGTCTGATTATCGCGGTGGT 660
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TGTATTCTAGGAGAACTTCCAGTATTTAAATCATTATTAGTGAGCTGGTTCTTTCAAGGA 720
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AAGAGTTCCTTTCTGGTCCTTACAAATTTTCCAACGATAGGTGTAGCAGTCTAGCACCTT 780
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TCATCATTATCTTAATTCACTTGTTTAGGATCAAAATGGCCATATTATATAGTATTAACT 840
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      ACTCGTAGGTGAGGCACCCTCAAATCCTATTTGCCATTTTAATCTCTGATACTCAGTGCC 900
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TTGAGGGAATTTTTAGCAAACATTCTGCGGACTGTGCTGATTATCATTGATTTGTATTAT 960
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GTTTACATAACTACCACACATGATCATGGATGACTAGGTAAGTTACAGGATGTCATACTC 1020
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AAGTCAACTATTTATTCTTGGATTCTATATTCTCTTTAAGCTTTGTACATTATCTGGGCA 1080
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AATCAGCTAGCAGCCTAGCATATTAATTCAACCTTACTATTCCAGGGAACAACAAATACT 1140
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TAAATTCGTAAATTTATTTGTGGTCATATCGTGAGACACTACTCGTTGTCTAAAGCATGA 1200
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TGGAAGGGTCTTTCCTGGTTAGATCTCTAACGGGTGAAAAAATGTGAAGAAATAGTTGTT 1260
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GGATGCTGTTGCTGTATTTCCCAACAGATGACTACACCAGCAACACAACTACAAATTATT 1320
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CTTAGCTACGTGGAAATATATACGTGGAGAATGACACGTCAGTATGAGGAGATTCTCAGG 1380
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AGACTCACCAGAAGTGCAAAGTTTTTGCTGAATAGTGGACGACAACCTCTGCTCCAGTTT 1440
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GTTGGATCTCTCATCTCATATCCAGGGGGACAAGAACACTTGAAGCTTGGCAAGAACTCA 1500
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CATATACCATTCTCGCCACACAGTCCATGCACATCACACAATTTTGCTATAGCCTGCCAT 1560
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GAGACTTTCCAGCTCCCATCTGATGCATTCAAACTATACATTCTTAGATTCCCATCATAA 1620
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TCAAGCGTCAGCCTTCTGTTGATTCCAGCACCCCAATCAGCAGCCTTGATATCCAGCTTA 1680
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TCACTTGAGAGGAAGTGTCCTTCAGTGTCAAGGATTGCATTCCTGGAGCCATTGTAGCTA 1740
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GTCCTCCCAATATCAAACACTGAGTAGTCTGGACTTGGCCAATAGATGCTAGATATTTCT 1800
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GGCCCATCATACATGAGGCGTAACACATTGTCATTGTCAAAATAGAGGTTGAAATAACCA 1860
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      GAGACCAGTCTTGTACCTTTGGTGAGAGGCTGTAATGGAAGCAAGGTATCCGTTGGTGCC 1920
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CAGAAGCTTTGCCATAACTTCGTGCCTGTGGAGTCTCTGATGACGAGATTGCCAGTGTCA 1980
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AGAAGGACAGCCGTTGTGCCCTTGCCAGAGCTCGTCTTGCTGTCCCAATTTGCGGTGCCA 2040
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TTGACATCAGCGAGGACCAGGTTACCTTCATGGTTCAGTGTCACCTTAGAGCCATGGCCA 2100
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TTTACCGGGGACTTGGGGTTTGCAGACCATACGACGGTCCTATTCTTGCTGTTGGTGAAC 2160
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CAGATGGAGAAGGAGAAAGCATTCCCTCCAACTTCATAGAAGCCACAAGAGAAATCGGCG 2220
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TTTGGTGAGGTAAGGAAGGTTTGCTTATGCTCTTCAACAAATAAGGATGAGCCGGTGCTT 2280
consensus_4132#1      ------------------------------------------------------------
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      AGCATCAACAGGGGTGAAGCATATGAGAATGGCAGTACACTGATCAAGGGAAGAATGACT 2340
consensus_4132#1      ----------------------------------------------GGGAAAGCATTCCC 14
consensus_4132#2      ------------GGGGGTGCTTATCGTATTGAATGAGAGGCGA-CGGGAAAATCTTTAAT 47
                                                                     *  **   *    

consensus_4132#0      A--GACAGAGTAATCTTGCCATTTT---GTTTTCTTTGTGTTCAGGCCATCAGATCATGG 2395
consensus_4132#1      TCCAACTTCATAGAAGCCCAAGAGA---AATCGGCGTTTGGTGAGGCCATCAGATCNTGG 71
consensus_4132#2      ATGGATCCCCCGGGCGGCCCGAATTCAGACGAGGGGTTTGGTGAGGCCATCATATCATGG 107
                          *             *                 * ** * ********* *** ***

consensus_4132#0      TATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCA 2455
consensus_4132#1      TATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCA 131
consensus_4132#2      TATGGAGGAAGGTGTTTGCTTCCATTTATGATGCTCTGCCTCATCCTTATTTGATATCCA 167
                      ************************************************************

consensus_4132#0      CTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGC 2515
consensus_4132#1      CTTGTTGCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCATGCTGCAAATTCTACATGC 191
consensus_4132#2      CTTGT-GCAAAGGTTCTTTCGTGGAGTCAAATTTGAATCCTTTTTGCAAATTCTACATGC 226
                      ***** ********************************** *  ****************

consensus_4132#0      CTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGC-ATTC 2574
consensus_4132#1      CTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGC-ATTC 250
consensus_4132#2      CTAAACCAGTAAACCGGGAATAGTTAAGTGCTCCTTCAGGACATTGTCGCATTGCCATTC 286
                      ******************************************************* ****

consensus_4132#0      AGTCCT-GGCGGCT-TTCAGCTTAAATATTTGACATGTTTCTTGTCTTGGTTACAATCTT 2632
consensus_4132#1      AGTCCT-GGCGGCT-TTCAGCTT------------------------------------- 271
consensus_4132#2      AGTCCTTGGCGGCTCTTCAGCCT------------------------------------- 309
                      ****** ******* ****** *                                     

consensus_4132#0      CATGACAGCTTTCACATTTTTG---AGAGCTGCCTCATTA--TTTCTCA-ATA-CCAACA 2685
consensus_4132#1      -----------TCACATTTTTG---AGAGCTGCCTCATTA--TTTCTCA-ATA-CCAACA 313
consensus_4132#2      ----------TTCACATTCTCGTGAAGAGCTGCCTCATTTATTTTCTCACATAACCAACA 359
                                 ******* * *   **************   ******* *** ******

consensus_4132#0      TTCT---GTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAG 2742
consensus_4132#1      TTCT---GTTTGGCGTGGACGATTTGGAAAGAAAGAAACAATCGGGTCTTCAACCAAAAG 370
consensus_4132#2      CTCCCTGGTCTCGGGCGGTGGGACCGAATTTTGGGAAATGAAAGGAAAACCATTCGGGGT 419
                       **    ** * * * **  *    * *      ****  *  **     **  *     

consensus_4132#0      AGTAGGA----CATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCG 2798
consensus_4132#1      AGTAGGA----CATGGGCGGAAATTGCTAGGGCCATGACGGGCGAAGCAGACCTTTGGCG 426
consensus_4132#2      TCTTCCCTCCCCCTAACTAGAAATTAGTGGAACTCTGGGGCCCGGAAAA----TTTGGCT 475
                        *        * *     ******  * *  *  **  *  ** *  *    ****** 

consensus_4132#0      GTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACA 2858
consensus_4132#1      GTTGGCTAGAGCCGCGATACCGGCCATGGCGACCCCTATGTCGGGTGGAAGGTCGCCACA 486
consensus_4132#2      CCTGGG------------------------------------------------------ 481
                        ***                                                       

consensus_4132#0      TTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCCCTCCTGTATCTTGTCCCCT 2918
consensus_4132#1      TTCGTTGGGAGATTAGGCTTTTATTTTCTTCCTCCTCCCCTCTCCTGTATCTTGTCCCCT 546
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      TCGTGTTTTTGATTTTTCGGCCC-GCTCTGTAAATACTTTATTCCTT-AATACAAAGATG 2976
consensus_4132#1      TCGNGTTTTTGATTTTTCGGCCCCGCTCTGTAAATACTTTATTCCTTTAATACAAAGATA 606
consensus_4132#2      ------------------------------------------------------------
                                                                                  

consensus_4132#0      CGTCCCT----- 2983
consensus_4132#1      CGTCCCTNGCGT 618
consensus_4132#2      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)