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Oryza sativa
cluster # 4139 cluster # 4139       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4139#0 length = 971 sequences # 3  

consensusID : consensus_4139#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 971
fasta sequence
                              [CCCGCCGCGCCTCGCTCGATCTACCGCCTCCGATCCGCTTCTTCTTCTTCTTCTCCCCCGCGATCTCGTGCTCTGATGGCGATGGCGATGGCGGCGTCCTCCTGCGCGTCCTGCTCCGCCGCCGCGGATTCTTTCTCCTCATCGGCGTCCTCCTGCTGCTGCTGCGGCTCCTCGCGGATTCAGGTACGTGGTGATGCCCCTTTCTTGTTCTTCTTGCAGGAGCTAGGTGTCGGTAGCGGCGGCGAGGGGTGCTTCTGCTGTGCTTCGTCTCCGGGGTACACGCCGTCGAGCCCGATGGTGATGGGGAGTCCGCGGCGCGCCGCCTCGCCGGACTACACGCCATCGACGCCTCCGCGGCGCGCCGCGT-CTCCGGACTACACGCCCTCGACTCCGACTACTCCACGCCGCGCCGCGTCACCGAACTACACGCCATCGACTCCTCAGCGCCACGCCGCGTCGCCAGACTACACGCCCTCGACTCCGACTCCTCCGCGCCGCGCGGCGTCGCTGGACTACACGCCCTCGACGCCTCCGCCCCGGGCCGCGTCGCCGGACTACACGCCGTTGTCCCCACCGCCACGGGCCGCGTCGCCGGAGTACAGCCCCAGCACGCCGCCTCCGCCCCCCGTGCCGTCCGACGCAGAGTCTGGCACGTCTCCGCTGTGGCGCCGCCGCCGCCGCCACCATCCCTACCAGAGGCGCGGCTCCAGCATCGCCTGCTCGCCGCGCGCGGTCCAGGTCGCCGGCGGCCACCATCACCACCCTCGCTGCGCCATCCTGCACGGATACTAGGCTCTTTTAGTTGTAGGCACCACCTTGTAACAGGACAACTCCGATTCTTGATGTAACTAATGTCTGGCACAACTAATCATGTGCCTCTATCTACTATATTTACATCATCTTGTATTATCATGGCTGTAACTATATGTCTATATCAAATGCAATAGAAATCTGNGNANGTNNTGAAAAAA]

[+] EMBL AK107040             [CCCGCCGCGCCTCGCTCGATCTACCGCCTCCGATCCGCTTCTTCTTCTTCTTCTCCCCCGCGATCTCGTGCTCTGATGGCGATGGCGATGGCGGCGTCCTCCTGCGCGTCCTGCTCCGCCGCCGCGGATTCTTTCTCCTCATCGGCGTCCTCCTGCTGCTGCTGCGGCTCCTCGCGGATTCAGGTACGTGGTGATGCCCCTTTCTTGTTCTTCTTGCAGGAGCTAGGTGTCGGTAGCGGCGGCGAGGGGTGCTTCTGCTGTGCTTCGTCTCCGGGGTACACGCCGTCGAGCCCGATGGTGATGGGGAGTCCGCGGCGCGCCGCCTCGCCGGACTACACGCCATCGACGCCTCCGCGGCGCGCCGCGT CTCCGGACTACACGCCCTCGACTCCGACTACTCCACGCCGCGCCGCGTCACCGAACTACACGCCATCGACTCCTCAGCGCCACGCCGCGTCGCCAGACTACACGCCCTCGACTCCGACTCCTCCGCGCCGCGCGGCGTCGCTGGACTACACGCCCTCGACGCCTCCGCCCCGGGCCGCGTCGCCGGACTACACGCCGTTGTCCCCACCGCCACGGGCCGCGTCGCCGGAGTACAGCCCCAGCACGCCGCCTCCGCCCCCCGTGCCGTCCGACGCAGAGTCTGGCACGTCTCCGCTGTGGCGCCGCCGCCGCCGCCACCATCCCTACCAGAGGCGCGGCTCCAGCATCGCCTGCTCGCCGCGCGCGGTCCAGGTCGCCGGCGGCCACCATCACCACCCTCGCTGCGCCATCCTGCACGGATACTAGGCTCTTTTAGTTGTAGGCACCACCTTGTAACAGGACAACTCCGATTCTTGATGTAACTAATGTCTGGCACAACTAATCATGTGCCTCTATCTACTATATTTACATCATCTTGTATTATCATGGCTGTAACTATATGTCTATATCAAATGCAATA                         ]
[+] EMBL AU095276             [                                                                                                                                                                                                                                                 GCGANGGGTGCTTCNGCTGTGCTTCGTCTCCGGGGTACACGCCGTCGAGCCCGATGGTGATNGGGAGTCCGCGGCGCGCCGCCTCGCCGGACTACACGCCATCGACGCCTCCGCGGCGCGCCG GTACTCCGGACTACACGCCCTCGACNCCGACTACTCCACGCCGCGCCGCGTCACCGGACTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU031170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTCCAGCATCGCCTGCTCGCCGCGCGCGGTCCNGGTCGCCGGCGGCCACCATCACCACCCTCG TGCGCCATCCTGCACGGATACTAGGCTCTTTTAGTTGTAGGCACCACCTTGTAACAGGACAACTCCGATTCTTGATGTAACTAATGTCTGGCACAACTAATCATGTGCCTCTATCTACTATATTTACATCATCTTGTATTATCATGGCTGTAACTATATGTCTATATCAAATGCNATNGAAATCTGNGNANGTNNTGAAAAAA]


>consensus_4139#0 CCCGCCGCGCCTCGCTCGATCTACCGCCTCCGATCCGCTTCTTCTTCTTCTTCTCCCCCG CGATCTCGTGCTCTGATGGCGATGGCGATGGCGGCGTCCTCCTGCGCGTCCTGCTCCGCC GCCGCGGATTCTTTCTCCTCATCGGCGTCCTCCTGCTGCTGCTGCGGCTCCTCGCGGATT CAGGTACGTGGTGATGCCCCTTTCTTGTTCTTCTTGCAGGAGCTAGGTGTCGGTAGCGGC GGCGAGGGGTGCTTCTGCTGTGCTTCGTCTCCGGGGTACACGCCGTCGAGCCCGATGGTG ATGGGGAGTCCGCGGCGCGCCGCCTCGCCGGACTACACGCCATCGACGCCTCCGCGGCGC GCCGCGTCTCCGGACTACACGCCCTCGACTCCGACTACTCCACGCCGCGCCGCGTCACCG AACTACACGCCATCGACTCCTCAGCGCCACGCCGCGTCGCCAGACTACACGCCCTCGACT CCGACTCCTCCGCGCCGCGCGGCGTCGCTGGACTACACGCCCTCGACGCCTCCGCCCCGG GCCGCGTCGCCGGACTACACGCCGTTGTCCCCACCGCCACGGGCCGCGTCGCCGGAGTAC AGCCCCAGCACGCCGCCTCCGCCCCCCGTGCCGTCCGACGCAGAGTCTGGCACGTCTCCG CTGTGGCGCCGCCGCCGCCGCCACCATCCCTACCAGAGGCGCGGCTCCAGCATCGCCTGC TCGCCGCGCGCGGTCCAGGTCGCCGGCGGCCACCATCACCACCCTCGCTGCGCCATCCTG CACGGATACTAGGCTCTTTTAGTTGTAGGCACCACCTTGTAACAGGACAACTCCGATTCT TGATGTAACTAATGTCTGGCACAACTAATCATGTGCCTCTATCTACTATATTTACATCAT CTTGTATTATCATGGCTGTAACTATATGTCTATATCAAATGCAATAGAAATCTGNGNANG TNNTGAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)