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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4195 cluster # 4195       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4195#0 length = 668 sequences # 3  

consensusID : consensus_4195#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 668
fasta sequence
                              [CCACGGGGAGATCGGAGCCTGCAA-GANAGCAACCACCGCCGCCGACGACGACGACGTTGACGGCGACGAGGAGACGATGAGCTACCAGAAAGTGCCGCCTCCTCAGGACGGCTACCCTCCTCCAGGGTACTCGCAGCCATACCCGCCGCCACCGTCCGGCGGGCAGTACCCACCTACGCAGTAC-TACCCGCCGACGAACCAGNCTCCTCCGGGGTACCAGGGCTACTTCAGCGAGGGGCAGCAGCCGCCATACTACTACCCGCCCCCGCATGATCCCCACCACCACCATGGTCACCACCACCACCACGAGGACCATCACCACCACGGCCACCACCACCATGGCCACCACGACGATGACTGCTGCCTTGGCTTCCTCAGAGGATGGTTGGCCATTCTTTGCTGCTGCTGCGTGCTGGAGGAATGTTGCTGCTGCTGCTGCTGATGG-CTGAATGCTTTGAAGCTCCTTGTTATCAACTATTCTTGAATGGAAAATTTTAAGTGTGAATTTGATTTTCTGTGATTGATGGACAGTACGTAGTGTGCATCTTGTTATTATTTGTCAATAAGTGGACTCTGTTATCTGTATATGCCCCGCTCAAATATGAAAGGTGTTCAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL OSS2828A             [CCACGGGGAGATCGGAGCCTGCAA GANAGCAACCACCGCCGCCGACGACGACGACGTTGACGGCGACGAGGAGACGATGAGCTACCAGAAAGTGCCGCCTCCTCAGGACGGCTACCCTCCTCCAGGGTACTCGCAGCCATACCCGCCGCCACCGTCCGGCGGGCAGTACCCACCTACGCAGTACTTACCCGCCGACGAACCAGNCTCCTCCGGGGTACCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK121614             [            CGGAGCCTGCAAGGCAAGCAACCACCGCCGCCGACGACGACGACGTTGACGGCGACGAGGAGACGATGAGCTACCAGAAAGTGCCGCCTCCTCAGGACGGCTACCCTCCTCCAGGGTACTCGCAGCCATACCCGCCGCCACCGTCCGGCGGGCAGTACCCACCTACGCAGTAC TACCCGCCGCCGAACCAGCCTCCTCCGGGGTACCAGGGCTACTTCAGCGAGGGGCAGCAGCCGCCATACTACTACCCGCCCCCGCATGATCCCCACCACCACCATGGTCACCACCACCACCACGAGGACCATCACCACCACGGCCACCACCACCATGGCCACCACGACGATGACTGCTGCCTTGGCTTCCTCAGAGGATGGTTGGCCATTCTTTGCTGCTGCTGCGTGCTGGAGGAATGTTGCTGCTGCTGCTGCTGATGG CTGAATGCTTTGAAGCTCCTTGTTATCAACTATTCTTGAATGGAAAATTTTAAGTGTGAATTTGATTTTCTGTGATTGATGGACAGTACGTAGTGTGCATCTTGTTATTATTTGTCAATAAGTGGACTCTGTTATCTGTATATGCCCCGCTCAAATATGAAAGGTGTTC                                                      ]
[+] EMBL CA757430             [                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTGGAGGAATGTTGCTGCTGCTGCTGCTGATGGCCTGAATGCTTTGAAGCTCCTTGTTATCAACTATTCTTGAATGGAAAATTTTAAGTGTGAATTTGATTTTCTGTGATTGATGGACAGTACGTAGTGTGCATCTTGTTATTATTTGTCAATAAGTGGACTCTGTTATCTGTATATGCCCCGCTCAAATATGAAAGGTGTTCAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_4195#0 CCACGGGGAGATCGGAGCCTGCAAGANAGCAACCACCGCCGCCGACGACGACGACGTTGA CGGCGACGAGGAGACGATGAGCTACCAGAAAGTGCCGCCTCCTCAGGACGGCTACCCTCC TCCAGGGTACTCGCAGCCATACCCGCCGCCACCGTCCGGCGGGCAGTACCCACCTACGCA GTACTACCCGCCGACGAACCAGNCTCCTCCGGGGTACCAGGGCTACTTCAGCGAGGGGCA GCAGCCGCCATACTACTACCCGCCCCCGCATGATCCCCACCACCACCATGGTCACCACCA CCACCACGAGGACCATCACCACCACGGCCACCACCACCATGGCCACCACGACGATGACTG CTGCCTTGGCTTCCTCAGAGGATGGTTGGCCATTCTTTGCTGCTGCTGCGTGCTGGAGGA ATGTTGCTGCTGCTGCTGCTGATGGCTGAATGCTTTGAAGCTCCTTGTTATCAACTATTC TTGAATGGAAAATTTTAAGTGTGAATTTGATTTTCTGTGATTGATGGACAGTACGTAGTG TGCATCTTGTTATTATTTGTCAATAAGTGGACTCTGTTATCTGTATATGCCCCGCTCAAA TATGAAAGGTGTTCAGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)