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Oryza sativa
cluster # 4284 cluster # 4284       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4284#0 length = 2459 sequences # 3  

consensusID : consensus_4284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2459
fasta sequence
                              [CTCGCCATTCTCTCTCTCACACACACACCTCGCGTCGCCTCCCTCCCCGAGCGAGCGAGCGAGCGTGCGCGTGCCTACGCCCTCCTCTCTACCGCCATGGCGATCTCGCCGGTGGCGGCGATGGCGCTGGCCATCGCCCTCGCGGCGCTCTGCCTCGCGGGGCTGGCCGCCGGGTTCTACCTCCCAGGCGTCGCGCCCAACAACTTCGACAAGAAAGATCCTCTTCAAGTGAAAGTCAACAAATTGACATCAATCAAGACCCAGCTTCCCTACTCTTATGTCGACAGTGCTCAAAATCTCGGTGAAGTTCTTCGTGGTGATCGAATCGAGAACTCTCCATACACGTTTGAAATGAGAGAGCCTCAAATGCTGTCAAATAGTCTGCAAGATTTCTGTCGGGGAGAAAGAAGCAAAGATTCTCAAGGAAAAGATTGAAGATGAGTACCGTGTGAACATGCAAGCTAGTGTAACTTGGTTTCTTGATTCTAAGAGCTTATTCATGGCTGCCAAATATTCTAAACATTCATTTTCTCAACATGATTCTTGACAACTTACCTCTAGTTGTTCCAATTAAAAGAATGGACCAAGAAGGTGCATATTTCTATCAGCATGTCTTCCATGTTGGAGCCAAAGGACAATATGCAAGGAGCAAGGATGAAAAGAGCTTCATTCACAACCATTTATCATTTACTGTGAAGTATCACAGGGATGCCCAAAGGGATGTTTCTAGGATAGTTGCATTTGAAGTGAAACCATACAGTTATGCTGCATGTGATTTATTAAACAACGTTAAACATGAATACGAAGGACAGTGGAATGACAAGAAGACCCGCCTGACCACTTGTGATCCTCATGCAAAACATATAATTACATCATCTGATTCTCCCCAGGAGGTTGAAGTTGGCAAAGACATAATATTTACTTATGATGTGGATTTCAAGGAGAGTGATATCAAGTGGGCATCTCGCTGGCTGGGATACCTATCTACTGATGACGGATGACCAAATCCACTGGTTTTCCATTGTGAATTCCCTCATGATTATCCTCTTCCTTTCTGGAATGGTTGCAATGATCATGCTCCGAACCCTTTACCGGGATATCTCCAAGTATAACCAGCTTGGGACTCAGGAAGAAGCCCAGGAAGAAACAGGATGGAAGCTTGTCCATGGTGATGTTTTCAGGCCTCCATCCAACTCTGACTAGCTCTGTGTTTATGTCGGTACAGGAGTCCAGTTTATTGGCATGCTGCTTGTCACCATGGTCTTTGCAGTCCTTGGATTCCTTTCTCCATCAAACAGGGGTGGACTGATGACAGCGATGCTCTTGCTTTGGGTATTCATGGGGTTGCTCGCTGGCTACTCTTCTTCAAGTCTTTACAAGTTGTTCAAGGGCGCAGAATGGAAGAACATTGCATTGAGGACAGCCTTCACTTTCCCTGGCAGTGTATTTGCTATTTTCTTCTTCCTGAATTCTCTTATTTGGGGGCAGAAGTCCTCAGGCGCAGTTCCATTCACCACAATGTTTGCCCTTGTCCTCCTTTGGTTCGGTATCTCAGTGCCCCTAGTATTTGTTGGGAGTTTCCTTGGCTTCAAGAAGCCTGCAATTGAGGATCCCGTGAAAACAAACAAGATACCCAGGCAGATTCCTGAGCAGGCCTGGTACATGAACCCGATCTTCTCAATTCTAATTGGAGGAATCCTTCCATTTGGTGCTGTATTCATTGAGCTCTTTATCCTGACCTCCATCTGGCTGCACCAGTTCTACTACATCTTTGGGTTCTGATCCTGGTCATAACTTGTGCTGAGATCTCGATCGTGCTCTGCTACTTCCAGCTGTGCAGCGAGGACTATCTGTGGTGGTGGAGGTCATACTTGACATCAGGGTCTTCTGCTATCTACCTGTTCTTGTATGCAACCTTCTACTTCTTCACAAAGCTGGAGATCACAAAGTTTGTGTCAGCTGTTCTGTACTTCGGTTACATGCTTACCGCCTCATATGCCTTCTTTGCCTTGACTGGTACGATCGGATTCTACGCATGCTTCCTGTTCACTAGGCTGATGTACTCTTCTGTCAAGATCGAGTAAAGAGGCTGTCTTGCCTAATTCTTTATTGCCACGGCAAGTACTGATCCTGCGGAGTGCGGACAGTGAATATGGTCTCCAAGCTTAGTTGCCTGTGGCATCAGTTTTGAGTTTTCAAAGCTGGTAGTTAAGATGAACTGGTGATTTGTTATCCCATGATTCAGGTATCATAGCTAGCTCAGTGGTTTTTTGTTTTCATTTTCTTTTACCTTTTCTTCTTTTTATGGATTTAGCCCTTGGATCACGGCCTATTAAGTGGTTGTTGCAGAGTTAATTGTATACGAATGCTGAGTAATCCATTTCTCTCCCTATCAGAATGTTATGTACTTGTTGACCTATAATGCGACTACCATTAAAGATATTACTGCAGTTGAAATA]

[+] EMBL AK070103             [CTCGCCATTCTCTCTCTCACACACACACCTCGCGTCGCCTCCCTCCCCGAGCGAGCGAGCGAGCGTGCGCGTGCCTACGCCCTCCTCTCTACCGCCATGGCGATCTCGCCGGTGGCGGCGATGGCGCTGGCCATCGCCCTCGCGGCGCTCTGCCTCGCGGGGCTGGCCGCCGGGTTCTACCTCCCAGGCGTCGCGCCCAACAACTTCGACAAGAAAGATCCTCTTCAAGTGAAAGTCAACAAATTGACATCAATCAAGACCCAGCTTCCCTACTCTTATGTCGACAGTGCTCAAAATCTCGGTGAAGTTCTTCGTGGTGATCGAATCGAGAACTCTCCATACACGTTTGAAATGAGAGAGCCTCAAATGCTGTCAAATAGTCTGCAAGATTTCTGTCGGGGAGAAAGAAGCAAAGATTCTCAAGGAAAAGATTGAAGATGAGTACCGTGTGAACATGCAAGCTAGTGTAACTTGGTTTCTTGATTCTAAGAGCTTATTCATGGCTGCCAAATATTCTAAACATTCATTTTCTCAACATGATTCTTGACAACTTACCTCTAGTTGTTCCAATTAAAAGAATGGACCAAGAAGGTGCATATTTCTATCAGCATGTCTTCCATGTTGGAGCCAAAGGACAATATGCAAGGAGCAAGGATGAAAAGAGCTTCATTCACAACCATTTATCATTTACTGTGAAGTATCACAGGGATGCCCAAAGGGATGTTTCTAGGATAGTTGCATTTGAAGTGAAACCATACAGTTATGCTGCATGTGATTTATTAAACAACGTTAAACATGAATACGAAGGACAGTGGAATGACAAGAAGACCCGCCTGACCACTTGTGATCCTCATGCAAAACATATAATTACATCATCTGATTCTCCCCAGGAGGTTGAAGTTGGCAAAGACATAATATTTACTTATGATGTGGATTTCAAGGAGAGTGATATCAAGTGGGCATCTCGCTGGCTGGGATACCTATCTACTGATGACGGATGACCAAATCCACTGGTTTTCCATTGTGAATTCCCTCATGATTATCCTCTTCCTTTCTGGAATGGTTGCAATGATCATGCTCCGAACCCTTTACCGGGATATCTCCAAGTATAACCAGCTTGGGACTCAGGAAGAAGCCCAGGAAGAAACAGGATGGAAGCTTGTCCATGGTGATGTTTTCAGGCCTCCATCCAACTCTGACTAGCTCTGTGTTTATGTCGGTACAGGAGTCCAGTTTATTGGCATGCTGCTTGTCACCATGGTCTTTGCAGTCCTTGGATTCCTTTCTCCATCAAACAGGGGTGGACTGATGACAGCGATGCTCTTGCTTTGGGTATTCATGGGGTTGCTCGCTGGCTACTCTTCTTCAAGTCTTTACAAGTTGTTCAAGGGCGCAGAATGGAAGAACATTGCATTGAGGACAGCCTTCACTTTCCCTGGCAGTGTATTTGCTATTTTCTTCTTCCTGAATTCTCTTATTTGGGGGCAGAAGTCCTCAGGCGCAGTTCCATTCACCACAATGTTTGCCCTTGTCCTCCTTTGGTTCGGTATCTCAGTGCCCCTAGTATTTGTTGGGAGTTTCCTTGGCTTCAAGAAGCCTGCAATTGAGGATCCCGTGAAAACAAACAAGATACCCAGGCAGATTCCTGAGCAGGCCTGGTACATGAACCCGATCTTCTCAATTCTAATTGGAGGAATCCTTCCATTTGGTGCTGTATTCATTGAGCTCTTTATCCTGACCTCCATCTGGCTGCACCAGTTCTACTACATCTTTGGGTTCTGATCCTGGTCATAACTTGTGCTGAGATCTCGATCGTGCTCTGCTACTTCCAGCTGTGCAGCGAGGACTATCTGTGGTGGTGGAGGTCATACTTGACATCAGGGTCTTCTGCTATCTACCTGTTCTTGTATGCAACCTTCTACTTCTTCACAAAGCTGGAGATCACAAAGTTTGTGTCAGCTGTTCTGTACTTCGGTTACATGCTTACCGCCTCATATGCCTTCTTTGCCTTGACTGGTACGATCGGATTCTACGCATGCTTCCTGTTCACTAGGCTGATGTACTCTTCTGTCAAGATCGAGTAAAGAGGCTGTCTTGCCTAATTCTTTATTGCCACGGCAAGTACTGATCCTGCGGAGTGCGGACAGTGAATATGGTCTCCAAGCTTAGTTGCCTGTGGCATCAGTTTTGAGTTTTCAAAGCTGGTAGTTAAGATGAACTGGTGATTTGTTATCCCATGATTCAGGTATCATAGCTAGCTCAGTGGTTTTTTGTTTTCATTTTCTTTTACCTTTTCTTCTTTTTATGGATTTAGCCCTTGGATCACGGCCTATTAAGTGGTTGTTGCAGAGTTAATTGTATACGAATGCTGAGTAATCCATTTCTCTCCCTATCAGAATGTTATGTACTTGTTGACCTATAATGCGACTACCATTAAAGATATTACTGCAGTTGAAATA]
[+] EMBL CB684029             [                                            CCCCGAGCGAGCGAGCGAGCGTGCGCGTGCCTACGCCCTCCTCTCTACCGCCATGGCGATCTCGCCGGTGGCGGCGATGGCGCTGGCCATCGCCCTCGCGGCGCTCTGCCTCGCGGGGCTGGCCGCCGGGTTCTACCTCCGAGGAGTCGCGCCCAAGAACTTCGACAAGAAAGATCCTCTTCGAGTGGGAGTCAACAAATTGACGTCAATCAAGACCCAGCTTCCCTACTCTTATGTCAACAGTGCTCACAATCTCGGTGAAGTTCTTCGTGGAGATCGAATCGAGAACTCTCCGTACACGTTGGAAATGAGAGAGCCTCCAATGCTGCCAAATAGTCTGCAAGATTTCTGTCGGGGAGAAAGAACCAAAGATTCTCAAGGAAAAGAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB684030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATCCCGTGAAAACAAACAAGATACCCAGGCAGATTCCTGAGCAGGCCTGGTACATGAACCCGATCTTCTCAATTCTAATTGGAGGAATCCTTCCATTTGGTGCTGTATTCATTGAGCTCTTTATCCTGACCTCCATCTGGCTGCACCAGTTCTACTACATCTTTGGGTTCTGATCCTGGTCATAACTTGTGCTGAGATCTCGATCGTGCTCTGCTACTTCCAGCTGTGCAGCGAGGACTATCTGTGGTGGTGGAGGTCATACTTGACATCAGGGTCTTCTGCTATCTACCTGTTCTTGTATGCAACCTTCTACTTCTTCACAAAGCTGGAGATCACAAAGTTTGTGTCAGCTGTTCTGTACTTCGGTTACATGCTTACCGCCTCATATGCCTTCTTTGCCTTGACTGGTACGATCGGATTCTACGCATGCTTCCTGTTCACTAGGCTGATGTACTCTTCTGTCAAGATCGAGTAAAGAGGCTGTCTTGCCTAATTCTTTATTGCCACGGCAAGTACTGATCCTGCGGAGTGCGGACAGTGAATATGGTCTCCAAGCTTAGTTGCCTGTGGCATCAGTTTTGAGTTTTCAAAGCTGGTAGTTAAGATGAACTGGTGATTTGTTATCCCATGATTCAGGTATCATAGCTAGCTCAGTGGTTTTTTGTTTTCATTTTCTTTTACCTTTTCTTCTTTTTATGGATTTAGCCCTTGGATCACGGCCTATTAAGTGGTTGTTGCAGAGTTAATTGTATACGAATGCTGAGTAATCCATTTCTCT                                                                        ]


>consensus_4284#0 CTCGCCATTCTCTCTCTCACACACACACCTCGCGTCGCCTCCCTCCCCGAGCGAGCGAGC GAGCGTGCGCGTGCCTACGCCCTCCTCTCTACCGCCATGGCGATCTCGCCGGTGGCGGCG ATGGCGCTGGCCATCGCCCTCGCGGCGCTCTGCCTCGCGGGGCTGGCCGCCGGGTTCTAC CTCCCAGGCGTCGCGCCCAACAACTTCGACAAGAAAGATCCTCTTCAAGTGAAAGTCAAC AAATTGACATCAATCAAGACCCAGCTTCCCTACTCTTATGTCGACAGTGCTCAAAATCTC GGTGAAGTTCTTCGTGGTGATCGAATCGAGAACTCTCCATACACGTTTGAAATGAGAGAG CCTCAAATGCTGTCAAATAGTCTGCAAGATTTCTGTCGGGGAGAAAGAAGCAAAGATTCT CAAGGAAAAGATTGAAGATGAGTACCGTGTGAACATGCAAGCTAGTGTAACTTGGTTTCT TGATTCTAAGAGCTTATTCATGGCTGCCAAATATTCTAAACATTCATTTTCTCAACATGA TTCTTGACAACTTACCTCTAGTTGTTCCAATTAAAAGAATGGACCAAGAAGGTGCATATT TCTATCAGCATGTCTTCCATGTTGGAGCCAAAGGACAATATGCAAGGAGCAAGGATGAAA AGAGCTTCATTCACAACCATTTATCATTTACTGTGAAGTATCACAGGGATGCCCAAAGGG ATGTTTCTAGGATAGTTGCATTTGAAGTGAAACCATACAGTTATGCTGCATGTGATTTAT TAAACAACGTTAAACATGAATACGAAGGACAGTGGAATGACAAGAAGACCCGCCTGACCA CTTGTGATCCTCATGCAAAACATATAATTACATCATCTGATTCTCCCCAGGAGGTTGAAG TTGGCAAAGACATAATATTTACTTATGATGTGGATTTCAAGGAGAGTGATATCAAGTGGG CATCTCGCTGGCTGGGATACCTATCTACTGATGACGGATGACCAAATCCACTGGTTTTCC ATTGTGAATTCCCTCATGATTATCCTCTTCCTTTCTGGAATGGTTGCAATGATCATGCTC CGAACCCTTTACCGGGATATCTCCAAGTATAACCAGCTTGGGACTCAGGAAGAAGCCCAG GAAGAAACAGGATGGAAGCTTGTCCATGGTGATGTTTTCAGGCCTCCATCCAACTCTGAC TAGCTCTGTGTTTATGTCGGTACAGGAGTCCAGTTTATTGGCATGCTGCTTGTCACCATG GTCTTTGCAGTCCTTGGATTCCTTTCTCCATCAAACAGGGGTGGACTGATGACAGCGATG CTCTTGCTTTGGGTATTCATGGGGTTGCTCGCTGGCTACTCTTCTTCAAGTCTTTACAAG TTGTTCAAGGGCGCAGAATGGAAGAACATTGCATTGAGGACAGCCTTCACTTTCCCTGGC AGTGTATTTGCTATTTTCTTCTTCCTGAATTCTCTTATTTGGGGGCAGAAGTCCTCAGGC GCAGTTCCATTCACCACAATGTTTGCCCTTGTCCTCCTTTGGTTCGGTATCTCAGTGCCC CTAGTATTTGTTGGGAGTTTCCTTGGCTTCAAGAAGCCTGCAATTGAGGATCCCGTGAAA ACAAACAAGATACCCAGGCAGATTCCTGAGCAGGCCTGGTACATGAACCCGATCTTCTCA ATTCTAATTGGAGGAATCCTTCCATTTGGTGCTGTATTCATTGAGCTCTTTATCCTGACC TCCATCTGGCTGCACCAGTTCTACTACATCTTTGGGTTCTGATCCTGGTCATAACTTGTG CTGAGATCTCGATCGTGCTCTGCTACTTCCAGCTGTGCAGCGAGGACTATCTGTGGTGGT GGAGGTCATACTTGACATCAGGGTCTTCTGCTATCTACCTGTTCTTGTATGCAACCTTCT ACTTCTTCACAAAGCTGGAGATCACAAAGTTTGTGTCAGCTGTTCTGTACTTCGGTTACA TGCTTACCGCCTCATATGCCTTCTTTGCCTTGACTGGTACGATCGGATTCTACGCATGCT TCCTGTTCACTAGGCTGATGTACTCTTCTGTCAAGATCGAGTAAAGAGGCTGTCTTGCCT AATTCTTTATTGCCACGGCAAGTACTGATCCTGCGGAGTGCGGACAGTGAATATGGTCTC CAAGCTTAGTTGCCTGTGGCATCAGTTTTGAGTTTTCAAAGCTGGTAGTTAAGATGAACT GGTGATTTGTTATCCCATGATTCAGGTATCATAGCTAGCTCAGTGGTTTTTTGTTTTCAT TTTCTTTTACCTTTTCTTCTTTTTATGGATTTAGCCCTTGGATCACGGCCTATTAAGTGG TTGTTGCAGAGTTAATTGTATACGAATGCTGAGTAATCCATTTCTCTCCCTATCAGAATG TTATGTACTTGTTGACCTATAATGCGACTACCATTAAAGATATTACTGCAGTTGAAATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)