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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4338 cluster # 4338       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4338#0 length = 746 sequences # 3  

consensusID : consensus_4338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 746
fasta sequence
                              [TTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACCTTTTAGCTGTGGTGCAATCCACAAGCACAGGGCAACGGCCAAAAGCACGATCCGCCAGGACATCAGCGCACCATAGTCCGGCACCAGCGCTGCGGCCTGCTGCACAGAACTATGAATAGTCGCCAGCTCTGCGCCCTGCATCACTGACACCACGCCACTCACTACCAGTGCCAGTACAGAAATTGCTGGCAGCAGACGCATCGCCCAGCCATCGACGCCAGCCAGACTCAACAACAGGTAACCCAGTAACGGGCCGCCCATAAACATCGTCAGGAAGAAGCCCATCGGCGTCCAGATGCTGTACCAGGTCGGAACGGTATCAATGCTGTTATACACACGCACCATCATCCAGACAAAGATGACGCCAAGAACCATCGTCACTATCAGCCACAGCGTACGCAATGCCGGTGACAGCTTTTTCAGCATTGCCAGCAACCAGCCGATGCCGCCTACGGCAAAAAAGATCGAACCGCTGGCGATTTCGTTACTGAGTGCTGAAGCCCCTACCCGGTTGAGCGAGTTAAAAGCGCGCATTGGTGAACCAAGATGGAGCATAGAGGCGATAAAGCCAATGCCCATCAGCACCCATAAACCAAACATGCAGGCGATAACACGCTGCTGGG]

[+] EMBL CF307014             [TTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACCTTTTAGCTGTGGTGCAATCCACAAGCACAGGGCAACGGCCAAAAGCACGATCCGCCAGGACATCAGCGCACCATAGTCCGGCACCAGCGCTGCGGCCTGCTGCACAGAACTATGAATAGTCGCCAGCTCTGCGCCCTGCATCACTGACACCACGCCACTCACTACCAGTGCCAGTACAGAAATTGCTGGCAGCAGACGCATCGCCCAGCCATCGACGCCAGCCAGACTCAACAACAGGTAACCCAGTAACGGGCCGCCCATAAACATCGTCAGGAAGAAGCCCATCGGCGTCCAGATGCTGTACCAGGTCGGAACGGTATCAATGCTGTTATACACACGCACCATCATCCAGACAAAGATGACGCCAAGAACCATCGTCACTATCAGCCACAGCGTACGCAATGCCGGTGACAGCTTTTTCAGCATTGCCAGCAACCAGCCGATGCCGCCTACGGCAAAAAAGATCGAACCGCTGGCGATTTCGTTACTGAGTGCTGAAGCCCCTACCCGGTTGAGCGAGTTAAAAGCG                                                                                              ]
[+] EMBL CF324067             [                                                                                                                                                    CACAGGGCAACGGCCAAAAGCACGATCCGCCAGGACATCAGCGCACCATAGTCCGGCACCAGCGCTGCGGCCTGCTGCACAGAACTATGAATAGTCGCCAGCTCTGCGCCCTGCATCACTGACACCACGCCACTCACTACCAGTGCCAGTACAGAAATTGCTGGCAGCAGACGCATCGCCCAGCCATCGACGCCAGCCAGACTCAACAACAGGTAACCCAGTAACGGGCCGCCCATAAACATCGTCAGGAAGAAGCCCATCGGCGTCCAGATGCTGTACCAGGTCGGAACGGTATCAATGCTGTTATACACACGCACCATCATCCAGACAAAGATGACGCCAAGAACCATCGTCACTATCAGCCACAGCGTACGCAATGCCGGTGACAGCTTTTTCAGCATTGCCAGCAACCAGCCGATGCCGCCTACGGCAAAAAAGATCGAACCGCTGGCGATTGCGTTACTGAGTGCTGAAGCCCCTACCCGGTTGAGCGAGTTAAAAGCGCGCATTGGTGAACCAAGATGGAGCATAGAGGCGATAAAGCCAATGCCCATCAGCACCCATAAACCAAACATGCAGGCGATAACACGCTGCTGGG]
[+] EMBL CF322852             [                                                                                                                                                    CACAGGGCAACGGCCAAAAGCACGATCCGCCAGGACATCAGCGCACCATAGTCCGGCACCAGCGCTGCGGCCTGCTGCACAGAACTATGAATAGTCGCCAGCTCTGCGCCCTGCATCACTGACACCACGCCACTCACTACCAGTGCCAGTACAGAAATTGCTGGCAGCAGACGCATCGCCCAGCCATCGACGCCAGCCAGACTCAACAACAGGTAACCCAGTAACGGGCCGCCCATAAACATCGTCAGGAAGAAGCCCATCGGCGTCCAGATGCTGTACCAGGTCGGAACGGTATCAATGCTGTTATACACACGCACCATCATCCAGACAAAGATGACGCCAAGAACCATCGTCACTATCAGCCACAGCGTACGCAATGCCGGTGACAGCTTTTTCAGCATTGCCAGCAACCAGCCGATGCCGCCTACGGCAAAAAAGATCGAACCGCTGGCGATTTCGTTACTGAGTGCTGAAGCCCCTACCCGGTTGAGCGAGTTAAAAGCGCGCATTGGTGAACCAAGATGGAGCATAGAGGCGATAAAGCCAATGCCCATCAGCACCCATAAA                               ]


>consensus_4338#0 TTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGAT TAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATA ACCTTTTAGCTGTGGTGCAATCCACAAGCACAGGGCAACGGCCAAAAGCACGATCCGCCA GGACATCAGCGCACCATAGTCCGGCACCAGCGCTGCGGCCTGCTGCACAGAACTATGAAT AGTCGCCAGCTCTGCGCCCTGCATCACTGACACCACGCCACTCACTACCAGTGCCAGTAC AGAAATTGCTGGCAGCAGACGCATCGCCCAGCCATCGACGCCAGCCAGACTCAACAACAG GTAACCCAGTAACGGGCCGCCCATAAACATCGTCAGGAAGAAGCCCATCGGCGTCCAGAT GCTGTACCAGGTCGGAACGGTATCAATGCTGTTATACACACGCACCATCATCCAGACAAA GATGACGCCAAGAACCATCGTCACTATCAGCCACAGCGTACGCAATGCCGGTGACAGCTT TTTCAGCATTGCCAGCAACCAGCCGATGCCGCCTACGGCAAAAAAGATCGAACCGCTGGC GATTTCGTTACTGAGTGCTGAAGCCCCTACCCGGTTGAGCGAGTTAAAAGCGCGCATTGG TGAACCAAGATGGAGCATAGAGGCGATAAAGCCAATGCCCATCAGCACCCATAAACCAAA CATGCAGGCGATAACACGCTGCTGGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)