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Oryza sativa
cluster # 4525 cluster # 4525       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4525#0 length = 3152 sequences # 3  
consensusID : consensus_4525#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3152
fasta sequence 
                              [GTCCATGTCCATGGTGGTCGAGCACCACCGGCGCGGCCACCGCGAGCTCCTCCTCCCCCTCTAATGGCGCAGTACAGGCAGTCGGGCGGCTTCTTCGACTACCGCGGCGGCCACCACCACGCGCTCCCGGAGTACCACCGGCCCCTCCCGCACGCCTCCAAGCCGTCCCGGATCCGCCGCCCCGGGAAGCCCGCGCGCCGCCGCTCGCCGGCCGCGGCCGCCGCCGTCGCGTCCGCGCTCCTCCTCGCCGGCGTGTTCCTCCTCTCGCGCCGCCTCTCCCGCCAACCCGCAGAGATCAGCCAAGATTTGGGCGGCGGCGGGGAGGGGTTACCGGAGTGGAACCGGAGCAAGGAGCTCAAGTTCGGCCATGGCGGTGGAGGCCGGAGCGCGCAGGATTCGAGGTACTGGGACCGGGACGATCGGAGGCGGGACGAGGACTACTCGGAGGACGAGAAGGAGAAGATCTCGGGTGCAAGTGGAAATAATGCCGGTGTCAGTGATAAGGTTGTGACCTCTGATCCTGCTGTTGAGGAGAAAGGGTTGACCATGGATACCGGCGGTGCCGCCGATAAGGAGGCTGCTGAGGTAGCTGAAGGTGGGAAAGGAGGGACCTTGTACAATGAAGGGGGCAGGAAAGAGCTCGAGCAGTATGAGGCGGCTGCGATGGGAGCTGCGGGTACTGGGATCAGGGAGGTTGATCCGGATGATGAGTATGACGATGGCATTGATGCACAGGACGATCTTGATGATGCTCAGTCGCATTCATCTGATGGCGGGAGGAAGCTTGGCGACAGTAGTCATGAGAGCACCGAGAGTAAGGAAAATATAGCTCATGATAGCACCGGCAATAAGGAAAGCATCGCCTTAGAGAGACGCACGGAAACAGGTGCGGGTATTAGTGATGGTGTCGATGTTATTGATGCTGCTAATGTGAACCAAAAGAAGGTTTCGGCGACTGGTGATAAGAAACACGCGTCAAAAAAGAAATCAAAGCGCAAGAAGACTGGTTCAACTTGTGAAATGAGGTTTCTGAACTCCACTGCTCAACTCGTAGAGCCTGCTAAAAATGAGAAATTTGCTAGTTTTAATTTGGAATATGTGGAAGTTGAAGACAAACCTCTTGGATCAGAGTATTGGGAGCCAAGATTTGCTGGCCACCAGAGTTTACAAGAAAGAGAGGAATCATACTTAGCTCATGACCAACAATTAAATTGTGCTTTTGTTAAGGGTCCCAATGGTACAAGCACTGGTTTTGATATCTCAGAGGAAAACAGAAAGTACATGAGCAAATGCCACATTGCAGTATCTTCCTGCATCTTTGGAAATTCTGATCGTCTGAAGACTCCTTTTGGGAAAACAGTATGTTCTTTTTCTGTACCAACAAACTCCTGAAAAAATTATGATACCCCTAATCCTGCATGAGTTACAACCAATGTAACTCTTGTCAATGTATTTATTTTGGTTCTCTTGTATATTTTGGCAATCGCAAAATTAGCGTTCTTTGCATGATTTGTCTTAGAACCTTATAATCTCAGTAGCTTCATTTTTACCATAGGTACTTATTGGCTCTGTTAGTAGGCAATGAAACATAAACCTTATATAATAGGCCTGTGAAATGCAACTGAACCTTCTGCAATGTTAGTTTGGATATACATGAATATATAACCTCAATCTCCATACTTAGGTTAAACAATTGCTGACCTTTCCATTCTGTTGTTCCAATGCTCCCTGAATCTTTTTAAATGCTTCAGAAGTTGATGGAAATCTGGTAATATTTAAGAAATAACTTCATATGATATCTGTCTACGCAGATTACAAGTCTATCAAAGAAGACAGTATGCTTTGCTATGTTTTTGGATGAAATCACATTACGAACTTTGGAATCTGAAGGCCAAAAAATGGATAGTTCAGGTTTCATCGGTATATGGAAGATCATATTGATTAAGAATATGCCTTATAATGACATGCGGAGAGTCGGCAAAATACCGAAATTTCTGGCACATCGTCTTTTCCCATCATCAAGGTTCTCAATCTGGTTAGACAGCAAATTGCGATTACAAAATGATCCTATCCTTATCCTAGAGTATTTTCTTTGGCGGCATGGCTATGAATATGCTATTTCCAATCATTATGATCGACACTGTGTTTGGGAGGAAGTGGCACAGAACAAAAGGCTGAACAAGTTCAACCATACAATAATTGATCAGCAGTTTGAGTTTTACCAAGCAGATGGACTGACAAAGTTCAACCCATCGGATCCCAACAAGCTGCTACCAAGCTATGTCCCTGAAGGTTCTTTCATCGTGAGGGAACACACACCAATGTCCAACTTATTTTCATGCCTATGGTTCAATGAGGTTGATCGATTCACACCTCGTGACCAGCTCAGCTTTGCATATACATATTTGAAGCTTAGAAGAATGAACCCGGAGAAGCCATTTCGCCTTAATATGTTTAAGGATTGTGAGAGGCGGTCAATAGCAAAGTTATTCCATCATCGATCAGAAGAGAGACGCAGCAGTCCACAACTAACAAGATGACAGAGATTCTTTCGGAATGGGTGGTGCAAGGATATTTTAGGATTTTACCTTTGATATAGCACAGGATGGCACAGGACTATTCAGTGTCAAGATTTATGCCCCTGCTGAGGAATTTAAGCCTAAAGGTCGCAAGCGATTCTACTCCTTTACTCTATGATCCTGCAGACCAGTTCCTGCCGCCTTTCTATTTTGCACTTGACAAAGGCGGATTAGGGAACTATGGCCGTTTGATTTTCGTAAATTCTTCTGCTCTCGGTAAAGTTTTGTTCATTCTTTTGGGGTGATCTGGGACAAGTGGGGCATGAACTCCCAGAACTAGTTTAGCACTGTGTATTATCATATGGTTGTTAAAAGAACTACCAAGTGAAGACATGATTCCGATGTAATCCTCAATGGTCTTGTTGAAATGTAATACTACAACAGGAAACAAAACCTTCTGTAATTTCTCTGTGATAGCAAACTAGCAA-TTTTTTTTTTGTCTGAATTTGTGGAATCTCCAGGCTTCCCTTGTGCTTTTGCTAGAT-CAGAACTGAGAATGAATAAGTGATCATCTGTTTGTTTTTTGTTCCATGTACTACAGCTTGCTGCAATTGAGCATTCCTTCAACAATGA]

[+] EMBL AK070130             [GTCCATGTCCATGGTGGTCGAGCACCACCGGCGCGGCCACCGCGAGCTCCTCCTCCCCCTCTAATGGCGCAGTACAGGCAGTCGGGCGGCTTCTTCGACTACCGCGGCGGCCACCACCACGCGCTCCCGGAGTACCACCGGCCCCTCCCGCACGCCTCCAAGCCGTCCCGGATCCGCCGCCCCGGGAAGCCCGCGCGCCGCCGCTCGCCGGCCGCGGCCGCCGCCGTCGCGTCCGCGCTCCTCCTCGCCGGCGTGTTCCTCCTCTCGCGCCGCCTCTCCCGCCAACCCGCAGAGATCAGCCAAGATTTGGGCGGCGGCGGGGAGGGGTTACCGGAGTGGAACCGGAGCAAGGAGCTCAAGTTCGGCCATGGCGGTGGAGGCCGGAGCGCGCAGGATTCGAGGTACTGGGACCGGGACGATCGGAGGCGGGACGAGGACTACTCGGAGGACGAGAAGGAGAAGATCTCGGGTGCAAGTGGAAATAATGCCGGTGTCAGTGATAAGGTTGTGACCTCTGATCCTGCTGTTGAGGAGAAAGGGTTGACCATGGATACCGGCGGTGCCGCCGATAAGGAGGCTGCTGAGGTAGCTGAAGGTGGGAAAGGAGGGACCTTGTACAATGAAGGGGGCAGGAAAGAGCTCGAGCAGTATGAGGCGGCTGCGATGGGAGCTGCGGGTACTGGGATCAGGGAGGTTGATCCGGATGATGAGTATGACGATGGCATTGATGCACAGGACGATCTTGATGATGCTCAGTCGCATTCATCTGATGGCGGGAGGAAGCTTGGCGACAGTAGTCATGAGAGCACCGAGAGTAAGGAAAATATAGCTCATGATAGCACCGGCAATAAGGAAAGCATCGCCTTAGAGAGACGCACGGAAACAGGTGCGGGTATTAGTGATGGTGTCGATGTTATTGATGCTGCTAATGTGAACCAAAAGAAGGTTTCGGCGACTGGTGATAAGAAACACGCGTCAAAAAAGAAATCAAAGCGCAAGAAGACTGGTTCAACTTGTGAAATGAGGTTTCTGAACTCCACTGCTCAACTCGTAGAGCCTGCTAAAAATGAGAAATTTGCTAGTTTTAATTTGGAATATGTGGAAGTTGAAGACAAACCTCTTGGATCAGAGTATTGGGAGCCAAGATTTGCTGGCCACCAGAGTTTACAAGAAAGAGAGGAATCATACTTAGCTCATGACCAACAATTAAATTGTGCTTTTGTTAAGGGTCCCAATGGTACAAGCACTGGTTTTGATATCTCAGAGGAAAACAGAAAGTACATGAGCAAATGCCACATTGCAGTATCTTCCTGCATCTTTGGAAATTCTGATCGTCTGAAGACTCCTTTTGGGAAAACAGTATGTTCTTTTTCTGTACCAACAAACTCCTGAAAAAATTATGATACCCCTAATCCTGCATGAGTTACAACCAATGTAACTCTTGTCAATGTATTTATTTTGGTTCTCTTGTATATTTTGGCAATCGCAAAATTAGCGTTCTTTGCATGATTTGTCTTAGAACCTTATAATCTCAGTAGCTTCATTTTTACCATAGGTACTTATTGGCTCTGTTAGTAGGCAATGAAACATAAACCTTATATAATAGGCCTGTGAAATGCAACTGAACCTTCTGCAATGTTAGTTTGGATATACATGAATATATAACCTCAATCTCCATACTTAGGTTAAACAATTGCTGACCTTTCCATTCTGTTGTTCCAATGCTCCCTGAATCTTTTTAAATGCTTCAGAAGTTGATGGAAATCTGGTAATATTTAAGAAATAACTTCATATGATATCTGTCTACGCAGATTACAAGTCTATCAAAGAAGACAGTATGCTTTGCTATGTTTTTGGATGAAATCACATTACGAACTTTGGAATCTGAAGGCCAAAAAATGGATAGTTCAGGTTTCATCGGTATATGGAAGATCATATTGATTAAGAATATGCCTTATAATGACATGCGGAGAGTCGGCAAAATACCGAAATTTCTGGCACATCGTCTTTTCCCATCATCAAGGTTCTCAATCTGGTTAGACAGCAAATTGCGATTACAAAATGATCCTATCCTTATCCTAGAGTATTTTCTTTGGCGGCATGGCTATGAATATGCTATTTCCAATCATTATGATCGACACTGTGTTTGGGAGGAAGTGGCACAGAACAAAAGGCTGAACAAGTTCAACCATACAATAATTGATCAGCAGTTTGAGTTTTACCAAGCAGATGGACTGACAAAGTTCAACCCATCGGATCCCAACAAGCTGCTACCAAGCTATGTCCCTGAAGGTTCTTTCATCGTGAGGGAACACACACCAATGTCCAACTTATTTTCATGCCTATGGTTCAATGAGGTTGATCGATTCACACCTCGTGACCAGCTCAGCTTTGCATATACATATTTGAAGCTTAGAAGAATGAACCCGGAGAAGCCATTTCGCCTTAATATGTTTAAGGATTGTGAGAGGCGGTCAATAGCAAAGTTATTCCATCATCGATCAGAAGAGAGACGCAGCAGTCCACAACTAACAAGATGACAGAGATTCTTTCGGAATGGGTGGTGCAAGGATATTTTAGGATTTTACCTTTGATATAGCACAGGATGGCACAGGACTATTCAGTGTCAAGATTTATGCCCCTGCTGAGGAATTTAAGCCTAAAGGTCGCAAGCGATTCTACTCCTTTACTCTATGATCCTGCAGACCAGTTCCTGCCGCCTTTCTATTTTGCACTTGACAAAGGCGGATTAGGGAACTATGGCCGTTTGATTTTCGTAAATTCTTCTGCTCTCGGTAAAGTTTTGTTCATTCTTTTGGGGTGATCTGGGACAAGTGGGGCATGAACTCCCAGAACTAGTTTAGCACTGTGTATTATCATATGGTTGTTAAAAGAACTACCAAGTGAAGACATGATTCCGATGTAATCCTCAATGGTCTTGTTGAAATGTAATACTACAACAGGAAACAAAACCTTCTGTAATTTCTCTGTGATAGCAAACTAGCAA TTTTTTTTTTGTCTGAATTTGTGGAATCTCCAGGCTTCCCTTGTGCTTTTGCTAGAT CAGAACTGAGAATGAATAAGTGATCATCTGTTTGTTTTTTGTTCCATGTACTACAGCTTGCTGCAATTGAGCATTCCTTCAACAATGA]
[+] EMBL CF196884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGTTAGACAGCAAATTGCGATTACAAAATGATCCTATCCTTATCCTAGAGTATTTTCTTTGGCGGCATGGCTATGAATATGCTATTTCCAATCATTATGATCGACACTGTGTTTGGGAGGAAGTGGCACAGAACAAAAAGCTGAACAAGTTCAACCATACAATAATTGATCAGCAGTTTGAGTTTTACCAAGCAGATGGACTGACAAAGTTCAACCCATCGGATCCCAACAAGCTGCTACCAAGCTATGTCCCTGAAGGTTCTTTCATCGTGAGGGAACACACACCAATGTCCAACTTATTTTCATGCCTATGGTTCAATGAGGTTGATCGATTCACACCTCGTGACCAGCTCAGCTTTGCATATACATATTTGAAGCTTAGAAGAATGAACCCGGAGAAGCCATTTCGCCTTAATATGTTTAAGGATTGTGAGAGGCGGTCAATAGCAAAGTTATTCCATCATCGATCAGAAGAGAGACGCAGCAATCCACAACTAACAAGATGACAGAGATTCTTTCGGAATGGGTGGTGCAAGGATATTTTANNATTTTACCTTTGATATAGCACNNNATGGCACNNNACTATTCAGTGTCAngnnnta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C97815               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCAGTTCCTGCCGCCTTTCTATTTTGCACTTGACAAAGGCGGATTAGGGAACTATGGCCGTTTGATTTTCGTAAATTCTTCTGCTCTCGGTAAAGTTTTGTTCATTCTTTTGGGGTGATCTGGGACAAGTGGGGCATGAACTCCCAGAACTAGTTTAGCACTGTGTATTATCATATGGTTGTTAAAAGAACTACCAAGTGAAGACATGATTCCGATGTAATCCTCAATGGTCTTGTTGAAATGTAATACTACAACAGGAAACAAAACCTTCTGTAATTTCTCTGTGATAGCAAACTAGCAATTTTTTTTTTTGTCTGAATTTGTGGAATCTCCAGGCTTCCCTTGTGC TTTGCTAGATCCAG ACTGAGAATGAATAAGTGATCA CNGGTTGTTTTTTGTTCCATGTA                                      ]




>consensus_4525#0
GTCCATGTCCATGGTGGTCGAGCACCACCGGCGCGGCCACCGCGAGCTCCTCCTCCCCCT
CTAATGGCGCAGTACAGGCAGTCGGGCGGCTTCTTCGACTACCGCGGCGGCCACCACCAC
GCGCTCCCGGAGTACCACCGGCCCCTCCCGCACGCCTCCAAGCCGTCCCGGATCCGCCGC
CCCGGGAAGCCCGCGCGCCGCCGCTCGCCGGCCGCGGCCGCCGCCGTCGCGTCCGCGCTC
CTCCTCGCCGGCGTGTTCCTCCTCTCGCGCCGCCTCTCCCGCCAACCCGCAGAGATCAGC
CAAGATTTGGGCGGCGGCGGGGAGGGGTTACCGGAGTGGAACCGGAGCAAGGAGCTCAAG
TTCGGCCATGGCGGTGGAGGCCGGAGCGCGCAGGATTCGAGGTACTGGGACCGGGACGAT
CGGAGGCGGGACGAGGACTACTCGGAGGACGAGAAGGAGAAGATCTCGGGTGCAAGTGGA
AATAATGCCGGTGTCAGTGATAAGGTTGTGACCTCTGATCCTGCTGTTGAGGAGAAAGGG
TTGACCATGGATACCGGCGGTGCCGCCGATAAGGAGGCTGCTGAGGTAGCTGAAGGTGGG
AAAGGAGGGACCTTGTACAATGAAGGGGGCAGGAAAGAGCTCGAGCAGTATGAGGCGGCT
GCGATGGGAGCTGCGGGTACTGGGATCAGGGAGGTTGATCCGGATGATGAGTATGACGAT
GGCATTGATGCACAGGACGATCTTGATGATGCTCAGTCGCATTCATCTGATGGCGGGAGG
AAGCTTGGCGACAGTAGTCATGAGAGCACCGAGAGTAAGGAAAATATAGCTCATGATAGC
ACCGGCAATAAGGAAAGCATCGCCTTAGAGAGACGCACGGAAACAGGTGCGGGTATTAGT
GATGGTGTCGATGTTATTGATGCTGCTAATGTGAACCAAAAGAAGGTTTCGGCGACTGGT
GATAAGAAACACGCGTCAAAAAAGAAATCAAAGCGCAAGAAGACTGGTTCAACTTGTGAA
ATGAGGTTTCTGAACTCCACTGCTCAACTCGTAGAGCCTGCTAAAAATGAGAAATTTGCT
AGTTTTAATTTGGAATATGTGGAAGTTGAAGACAAACCTCTTGGATCAGAGTATTGGGAG
CCAAGATTTGCTGGCCACCAGAGTTTACAAGAAAGAGAGGAATCATACTTAGCTCATGAC
CAACAATTAAATTGTGCTTTTGTTAAGGGTCCCAATGGTACAAGCACTGGTTTTGATATC
TCAGAGGAAAACAGAAAGTACATGAGCAAATGCCACATTGCAGTATCTTCCTGCATCTTT
GGAAATTCTGATCGTCTGAAGACTCCTTTTGGGAAAACAGTATGTTCTTTTTCTGTACCA
ACAAACTCCTGAAAAAATTATGATACCCCTAATCCTGCATGAGTTACAACCAATGTAACT
CTTGTCAATGTATTTATTTTGGTTCTCTTGTATATTTTGGCAATCGCAAAATTAGCGTTC
TTTGCATGATTTGTCTTAGAACCTTATAATCTCAGTAGCTTCATTTTTACCATAGGTACT
TATTGGCTCTGTTAGTAGGCAATGAAACATAAACCTTATATAATAGGCCTGTGAAATGCA
ACTGAACCTTCTGCAATGTTAGTTTGGATATACATGAATATATAACCTCAATCTCCATAC
TTAGGTTAAACAATTGCTGACCTTTCCATTCTGTTGTTCCAATGCTCCCTGAATCTTTTT
AAATGCTTCAGAAGTTGATGGAAATCTGGTAATATTTAAGAAATAACTTCATATGATATC
TGTCTACGCAGATTACAAGTCTATCAAAGAAGACAGTATGCTTTGCTATGTTTTTGGATG
AAATCACATTACGAACTTTGGAATCTGAAGGCCAAAAAATGGATAGTTCAGGTTTCATCG
GTATATGGAAGATCATATTGATTAAGAATATGCCTTATAATGACATGCGGAGAGTCGGCA
AAATACCGAAATTTCTGGCACATCGTCTTTTCCCATCATCAAGGTTCTCAATCTGGTTAG
ACAGCAAATTGCGATTACAAAATGATCCTATCCTTATCCTAGAGTATTTTCTTTGGCGGC
ATGGCTATGAATATGCTATTTCCAATCATTATGATCGACACTGTGTTTGGGAGGAAGTGG
CACAGAACAAAAGGCTGAACAAGTTCAACCATACAATAATTGATCAGCAGTTTGAGTTTT
ACCAAGCAGATGGACTGACAAAGTTCAACCCATCGGATCCCAACAAGCTGCTACCAAGCT
ATGTCCCTGAAGGTTCTTTCATCGTGAGGGAACACACACCAATGTCCAACTTATTTTCAT
GCCTATGGTTCAATGAGGTTGATCGATTCACACCTCGTGACCAGCTCAGCTTTGCATATA
CATATTTGAAGCTTAGAAGAATGAACCCGGAGAAGCCATTTCGCCTTAATATGTTTAAGG
ATTGTGAGAGGCGGTCAATAGCAAAGTTATTCCATCATCGATCAGAAGAGAGACGCAGCA
GTCCACAACTAACAAGATGACAGAGATTCTTTCGGAATGGGTGGTGCAAGGATATTTTAG
GATTTTACCTTTGATATAGCACAGGATGGCACAGGACTATTCAGTGTCAAGATTTATGCC
CCTGCTGAGGAATTTAAGCCTAAAGGTCGCAAGCGATTCTACTCCTTTACTCTATGATCC
TGCAGACCAGTTCCTGCCGCCTTTCTATTTTGCACTTGACAAAGGCGGATTAGGGAACTA
TGGCCGTTTGATTTTCGTAAATTCTTCTGCTCTCGGTAAAGTTTTGTTCATTCTTTTGGG
GTGATCTGGGACAAGTGGGGCATGAACTCCCAGAACTAGTTTAGCACTGTGTATTATCAT
ATGGTTGTTAAAAGAACTACCAAGTGAAGACATGATTCCGATGTAATCCTCAATGGTCTT
GTTGAAATGTAATACTACAACAGGAAACAAAACCTTCTGTAATTTCTCTGTGATAGCAAA
CTAGCAATTTTTTTTTTGTCTGAATTTGTGGAATCTCCAGGCTTCCCTTGTGCTTTTGCT
AGATCAGAACTGAGAATGAATAAGTGATCATCTGTTTGTTTTTTGTTCCATGTACTACAG
CTTGCTGCAATTGAGCATTCCTTCAACAATGA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)