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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4537 cluster # 4537       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4537#0 length = 1218 sequences # 3  

consensusID : consensus_4537#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1218
fasta sequence
                              [TGAACTACAAGGTGCTGCTGCTTTTCTTTATTGTCGTCTGGTGCCACTTATTCTGCTTTTGGTTGAAGGTTCGACGCCTATAGATATAACTGAGCATGGATGGGAAATGCTCCTGGTAGTAAAGAAGTCAGCACAGGCGTCATCCAGCTCTAACTTTCTAGTGCTAGGGTTTGCAGCTGTTCATCATTTTTATCACTACCCTGAGAGCACTCGCCTGCGGATCAGCCAGATACTGGTCTTGCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTTGAGACGATCAATTCTATTTCTGAGTCTGAGAACATATACGATGTGACCATAGAAGATCCTTCCGATTACCTTCAGTACATACGTTCATCCATTGACTGTCTCCGCCTTCTCACCTTCGATCCAATCAAGCCAGCGCTCTGTTCCATGGTCTCATCTCTGAAGGATACCAACCTTTCGAAAAGGACCAGCAGCTTGAAAATGGTTCCACCTTCCGACCTTGCTGAGACGGTCCGACAGAAGCTGAAGATCAACAAGAAGCAGTTCCTCCGGTGCTGGGAGATTCTGATCTACCTAAACCTTGACGCTGAGGACCGCAAGAGCATGGACAACTTCAGGGCCTGCATCTACGACCGCATCAAAGGCGAGATACTTGGCACTTCCACTGGCCCCAACGGGAAGCGGCTCGTCCAAATGCCGAGCAATTTCGACGAGGAGACATGCTTTGCTGTGTACTGGACACATGACGGTGGGGATGCAGATGACCAAACTGTTGAGCAGCAGCCTGAGGATCTCAAGACCCAGGAGCAGCAGCTGAATGAGGTGGTTGACAGCCAAATGGAAGAGATCGTCGAGGTAGCCAAGAACGTCACCTCACGCGGCAAGGATAAACTGAGCGTTTCTTGCTCCGTATGACGGTACGAGTGGTAACTTGGAAAAAACTGAATGCTGCATTGCAGCCACAGCTCGCCTGATGTCTCTTTGTAGCTCAAGACTTCAGGGTAGAAACTAGAGGCTAGAAAATTTTCAGGTCTGAGAATTATGTTCTGCGTATTCTACTTGAGCTTTTCCGAGATGAACTTCCTTCAGCTTAGTAATCTTAGTTATCATTCGAAATGATTTGCGTGCTATGTATTGTGATGTTAAATGGTACTAACCTGTATGCTGCTGCAATTGAACGGTTAATGCATCTTCATTATCTGAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101995             [TGAACTACAAGGTGCTGCTGCTTTTCTTTATTGTCGTCTGGTGCCACTTATTCTGCTTTTGGTTGAAGGTTCGACGCCTATAGATATAACTGAGCATGGATGGGAAATGCTCCTGGTAGTAAAGAAGTCAGCACAGGCGTCATCCAGCTCTAACTTTCTAGTGCTAGGGTTTGCAGCTGTTCATCATTTTTATCACTACCCTGAGAGCACTCGCCTGCGGATCAGCCAGATACTGGTCTTGCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTTGAGACGATCAATTCTATTTCTGAGTCTGAGAACATATACGATGTGACCATAGAAGATCCTTCCGATTACCTTCAGTACATACGTTCATCCATTGACTGTCTCCGCCTTCTCACCTTCGATCCAATCAAGCCAGCGCTCTGTTCCATGGTCTCATCTCTGAAGGATACCAACCTTTCGAAAAGGACCAGCAGCTTGAAAATGGTTCCACCTTCCGACCTTGCTGAGACGGTCCGACAGAAGCTGAAGATCAACAAGAAGCAGTTCCTCCGGTGCTGGGAGATTCTGATCTACCTAAACCTTGACGCTGAGGACCGCAAGAGCATGGACAACTTCAGGGCCTGCATCTACGACCGCATCAAAGGCGAGATACTTGGCACTTCCACTGGCCCCAACGGGAAGCGGCTCGTCCAAATGCCGAGCAATTTCGACGAGGAGACATGCTTTGCTGTGTACTGGACACAGGACGGTGGGGATGCAGATGACCAAACTGTTGAGCAGCAGCCTGAGGATCTCAAGACCCAGGAGCAGCAGCTGAATGAGGTGGTTGACAGCCAAATGGAAGAGATCGTCGAGATAGCCAAGAACGTCACCTCACGCGGCAAGGATAAACTGAGCGTTTCTTGCTCCGTATGACGGTACGAGTGGTAACTTGGAAAAAACTGAATGCTGCATTGCAGCCACAGCTCGCCTGATGTCTCTTTGTAGCTCAAGACTTCAGGGTAGAAACTAGAGGCTAGAAAATTTTCAGGTCTGAGAATTATGTTCTGCGTATTCTACTTGAGCTTTTCCGAGATGAACTTCCTTCAGCGTAGTAATCTTAG                                                                                                                     ]
[+] EMBL CB967124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCAAAGGCGAGATACTTGGCACTTCCACTGGCCCCAACGGGAAGCGGCTCGTCCAAATGCCGAGCAATTTCGACGAGGAGACATGCTTTGCTGTGTACTGGACACATGACGGTGGGGATGCAGATGACCAAACTGTTGAGCAGCAGCCTGAGGATCTCAAGACCCAGGAGCAGCAGCTGAATGAGGTGGTTGACAGCCAAATGGAAGAGATCGTCGAGGTAGCCAAGAACGTCACCTCACGCGGCAAGGATAAACTGAGCGTTTCTTGCTCCGTATGACGGTACGAGTGGTAACTTGGAAAAAACTGAATGCTGCATTGCAGCCACAGCTCGCCTGATGTCTCTTTGTAGCTCAAGACTTCAGGGTAGAAACTAGAGGCTAGAAAATTTTCAGGTCTGAGAATTATGTTCTGCGTATTCTACTTGAGCTTTTCCGAGATGAACTTCCTTCAGCTTAGTAATCTTAGTTATCATTCGAAATGATTTGCGTGCTATGTATTGTGATGTTAAATGGTACTAACCTGTATGCTGCTGCAATTGAACGGTTAATGCATCTTCATTATCTGAAAAAAAAAAAAAAAAAA]
[+] EMBL CB966928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTGGCACTTCCACTGG CCCAACGGGAAGCGG TCGTCCAAATGCCGAGCAATTTCGACGAGGAGACATGCTTTGCTGTGTACTGGACACATGACGGTGGGGATGCAGATGACCAAACTGTTGAGCAGCAGCCTGAGGATCTCAAGACCCAGGAGCAGCAGCTGAATGAGGTGGTTGACAGCCAAATGGAAGAGATCGTCGAGGTAGCCAAGAACGTCACCTCACGCGGCAAGGATAAACTGAGCGTTTCTTGCTCCGTATGACGGTACGAGTGGTAACTTGGAAAAAACTGAATGCTGCATTGCAGCCACAGCTCGCCTGATGTCTCTTTGTAGCTCAAGACTTCAGGGTAGAAACTAGAGGCTAGAAAATTTTCAGGTCTGAGAATTATGTTCTGCGTATTCTACTTGAGCTTTTCCGAGATGAACTTCCTTCAGCTTAGTAATCTTAGTTATCATTCGAAATGATTTGCGTGCTATTTATTGT                                                                                  ]


>consensus_4537#0 TGAACTACAAGGTGCTGCTGCTTTTCTTTATTGTCGTCTGGTGCCACTTATTCTGCTTTT GGTTGAAGGTTCGACGCCTATAGATATAACTGAGCATGGATGGGAAATGCTCCTGGTAGT AAAGAAGTCAGCACAGGCGTCATCCAGCTCTAACTTTCTAGTGCTAGGGTTTGCAGCTGT TCATCATTTTTATCACTACCCTGAGAGCACTCGCCTGCGGATCAGCCAGATACTGGTCTT GCCACCTTATCAAGGTGAAGGCCATGGACTTCGTCTTCTTGAGACGATCAATTCTATTTC TGAGTCTGAGAACATATACGATGTGACCATAGAAGATCCTTCCGATTACCTTCAGTACAT ACGTTCATCCATTGACTGTCTCCGCCTTCTCACCTTCGATCCAATCAAGCCAGCGCTCTG TTCCATGGTCTCATCTCTGAAGGATACCAACCTTTCGAAAAGGACCAGCAGCTTGAAAAT GGTTCCACCTTCCGACCTTGCTGAGACGGTCCGACAGAAGCTGAAGATCAACAAGAAGCA GTTCCTCCGGTGCTGGGAGATTCTGATCTACCTAAACCTTGACGCTGAGGACCGCAAGAG CATGGACAACTTCAGGGCCTGCATCTACGACCGCATCAAAGGCGAGATACTTGGCACTTC CACTGGCCCCAACGGGAAGCGGCTCGTCCAAATGCCGAGCAATTTCGACGAGGAGACATG CTTTGCTGTGTACTGGACACATGACGGTGGGGATGCAGATGACCAAACTGTTGAGCAGCA GCCTGAGGATCTCAAGACCCAGGAGCAGCAGCTGAATGAGGTGGTTGACAGCCAAATGGA AGAGATCGTCGAGGTAGCCAAGAACGTCACCTCACGCGGCAAGGATAAACTGAGCGTTTC TTGCTCCGTATGACGGTACGAGTGGTAACTTGGAAAAAACTGAATGCTGCATTGCAGCCA CAGCTCGCCTGATGTCTCTTTGTAGCTCAAGACTTCAGGGTAGAAACTAGAGGCTAGAAA ATTTTCAGGTCTGAGAATTATGTTCTGCGTATTCTACTTGAGCTTTTCCGAGATGAACTT CCTTCAGCTTAGTAATCTTAGTTATCATTCGAAATGATTTGCGTGCTATGTATTGTGATG TTAAATGGTACTAACCTGTATGCTGCTGCAATTGAACGGTTAATGCATCTTCATTATCTG AAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)