These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1500 fasta sequence [CAAGTCAATCTCCCGATTCCACCTCCGTAATCCCCGCTACCGCCGTGGTCGGAGCCGCCGAGCGCCGCCGTCGCGCCTCCCTCCACCGTCTTCCCACGCCGCCGCGCGACGGCTGCGGCGGTCGTCTTCCCCATTCGTCCCATCGATCCTCCTCCGGCTCAGTTCCACAGAAGCGCCACCTCATCACGAAGGCAATTTTACAGTTCGAACATTAGGAAGCATGAGCTATTTCCAGGCTACAACATACAAGCCTCATAATGGGATCATTGTGGACAAGGTAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTTCTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGTGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACAATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGTTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATT-GAGGATCCCTTTGGACTCTTCTCAAGATTTCA-GTGTATGTTGTAACCGTGCATAGGTAGGCACTAGTTGCAT-GGACGGTGCAGTG-AAGCGCATGGAGGAAACTAGAC-GGTCTGTTCTTTACT-GCATTCAGTTTTTCTTGCGTAGTGCAGCTGAATACTA-CGTTATATATT--GTCTGTATTGTTCATTACAGAACATAAAGGAAGGTGATAGTTCGTCTGGACAATTTTGCCGTTTTTGAAACCTCGCTGCTATGATGTGATCGTCTGCCGGTCAGTTAGGTGCAGGTGACAACTTGAATGCTGCATCTGATTCATCATAACTACAAAGAGTACCAGCTATACCCAATGAATGCAGCAAAAAATGTACCTGTAAGCTGTGGTCACTGTAAGCTTTGTAAATTTTGTGTTCTATGTTTTGTCCAACTCCCCATGTTGGTTCTTTGTTGGCCTATCTGAGCTATCTAGAGTGATTTATGGGAGCAACTATTTCTTCCAACCTGGAACATGAAACATCCAT] [+] EMBL AK064114 [CAAGTCAATCTCCCGATTCCACCTCCGTAATCCCCGCTACCGCCGTGGTCGGAGCCGCCGAGCGCCGCCGTCGCGCCTCCCTCCACCGTCTTCCCACGCCGCCGCGCGACGGCTGCGGCGGTCGTCTTCCCCATTCGTCCCATCGATCCTCCTCCGGCTCAGTTCCACAGAAGCGCCACCTCATCACGAAGGCAATTTTACAGTTCGAACATTAGGAAGCATGAGCTATTTCCAGGCTACAACATACAAGCCTCATAATGGGATCATTGTGGACAAGGTAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTTCTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGAGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACAATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGTTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATT GAGGATCCCTTTGGACTCTTCTCAAGATTTCA GTGTATGTTGTAACCGTGCATAGGTAGGCACTAGTTGCAT GGACGGTGCAGTG AAGCGCATGGAGGAAACTAGAC GGTCTGTTCTTTACT GCATTCAGTTTTTCTTGCGTAGTGCAGCTGAATACTA CGTTATATATT GTCTGTATTGTTCATTACAGAACATAAAGGAAGGTGATAGTTCGTCTGGACAATTTTGCCGTTTTTGAAACCTCGCTGCTATGATGTGATCGTCTGCCGGTCAGTTAGGTGCAGGTGACAACTTGAATGCTGCATCTGATTCATCATAACTACAAAGAGTACCAGCTATACCCAATGAATGCAGCAAAAAATGTACCTGTAAGCTGTGGTCACTGTAAGCTTTGTAAATTTTGTGTTCTATGTTTTGTCCAACTCCCCATGTTGGTTCTTTGTTGGCCTATCTGAGCTATCTAGAGTGATTTATGGGAGCAACTATTTCTTCCAACCTGGAACATGAAACATCCAT] [+] EMBL AK062853 [ ATCCCCGTTACCGCCGTGGTCGGAGCCGCCGAGCGCCGCCGTCGCGCCTCCCTCCACCGTCTTCCCACGCCGCCGCGCGACGGCTGCGGCGGTCGTCTTCCCCATTCGTCCCATCGATCCTCCTCCGGCTCAGTTCCACAGAAGCGCCACCTCATCACGAAGGCAATTTTACAGTTCGAACATTAGGAAGCATGAGCTATTTCCAGGCTACAACATACAAGCCTCATAATGGGATCATTGTGGACAAGGTAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTTCTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGTGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACAATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGTTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATT GAGGATCCCTTTGGACTCTTCTCAAGATTTCA GTGTATGTTGTAACCGTGCATAGGTAGGCACTAGTTGCAT GGACGGTGCAGTG AAGCGCATGGAGGAAACTAGAC GGTCTGTTCTTTACT GCATTCAGTTTTTCTTGCGTAGTGCAGCTGAATACTA CGTTATATATT GTCTGTATTGTTCATTACAGAACATAAAGGAAGGTGATAGT ] [+] EMBL CA764476 [ TAGCAATAGGTCTTGGGAGTACTTGCAAATTGCTTCATGAAAGGGCCAAATGTTCGTATTCCAATAGATTCATCAAGCTTCAAGAGCAAGTATACCCAAGGCTTCTTCTTGTTGCTGCTTGCCATAACAGGATTGGTCCTGTGTATGCCTCAAGTGGGAAAGGAAACTCTGAGCGTGTCAATGATCCCTACTCCATGGAATCTTTGAACAAAGCTATAGCTGGAACTAAAAAGCAATGGCCCATACAAGATATGCTGATAGATCAAATTTCTAAGATTAGAGGGTCTGGCTCTGGTGGAAATGGTGGTGGTAATAAAAACAGTCATGAAGGCAGTGGTGGTGGCTCAGAGGACGAATCTTTGACGGAGTCATTATATGAAATGGTCCAAGTTTTGTTGGCAACTATTGCCTTTATACTCATGTACATCCATATAATAAGAGGAGAGGAGTTATACCGCCTTGCGAGGGACTACACTAGATACCTGGTTACTGGTAAGAGAACTTCCAGACTGAAACGCGCCATGTTAAACTGGCACGATTTCTGTGAGGGCATCACCAACAAGGATAGCGTGCAAGAGTCAACATTTGAAAGATCAACTTCTGAACCAATGTGGTGGCAGCAGCCCCTAAAGNTTGTCCATCGCATTGAGGAACTTTACAGAGGCTATTTTCGCCCACATGCCCAGGAATCATAGTTCTGATGATTGGAGGATCCCTTTGGACTCTTCTCAAGANTTCAGGGGTATGNTGNAACCGNGCATAGGTAGGCACTAGTTGCATGGGCCGGTGCAGTGAAANCGCATGGAAGNAACTANACGGGCCTGTTCTTT CTGGNATTCAGNTTTTNTTGCGNANGGCAGCTGAANACCACCGTTTTA ATTGGGCCGGGATTGGTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||