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Oryza sativa
cluster # 4566 cluster # 4566       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4566#0 length = 2304 sequences # 1  
consensus_4566#1 length = 2257 sequences # 2  

consensusID : consensus_4566#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2304
fasta sequence
                              [CAAACCCCCTCGGCGACCAAACCAGAGCGCGGGGGGGCGATGGCGGTGCGGAGACGGGGGGCGTCGGCGGTGGCCGTGCACGGCGGCGGCGGCCGGGTGCCGAAGCGGGCGCGGGTGACGGCGGAGCCGTCGCTGCTCGACGTGCGGGCGTTCCCGGGGCAGAAGGAGGAGGGGGAGAAGCAGCCGGCGCGCGGCGGCGGGAAGAAGTCGTCGTCGTCGTCGTCGACGTTCCGGGCCCAGGTGAGGGGGTTCCTGGCGCGGTGCGCGGTGGCGGTGCCGGCGTCGGAGGCGGGTGAGTTGTCGCCGGGCATGTCGTCGTGGCACGTGGGGTTTACCACCGCCGGCGGCGAGGCGGTGGCGGTGATGGAGGTGGTGGAGGAGGAGGTGGCCAGGGCCAGGCGGGTCTACTGCGAGCACTGCACTGTTGCCGGCTGGAGCAAGCACCCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAACTGGCACCTCCAAAACCTGCAGGCGTTGCGGGTTCATGGTGGCACTGCAGGAAACAAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGACTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTTTGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCAACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGAAAAGTCTCAGTGATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGCTGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCTCAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCTCACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCAAGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGCAAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAAGAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGGGTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTCGATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATTCGATGCAACAGTGAGATGAACACTGTAGAGTACAGGCTTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACCTATTCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTTATATGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCAAGCAATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGTTGCACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAGCAGAGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGAGAGCATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATTGTGCAACTGCAAGCGACACAACACAAATCAAGCTCTTGTTTGGAGCAAAGGGGGCTGTCCACATCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGGGTGTGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAACGGACGATGACGGTGAGAGAATGCTATCCTGTGACACTTGCCATATGTGGATGCACACTAGGTGTGCTGGAATCAGTGATTTTGATAGGGTTCCAAAGAGATATGTATGTAAATCATGTAAACTAACCCACAAGCCGAAGAGCAGTGGTCCTAGGCTCATGTATAGTAGTGCACCTAACAAAAGATGTAAGACTGGCACAGGTTCCTTTAGCAATGCGGCTGAAGGATTACTGTGGCCTCAAATCAGCTAACATGTACATAACGATAACAAGGATTCATATGAGCCATGCCAGTTTTTCATGGCTGCAATTATGTAAACATTTGTAATGGTAAGTTGCCTGATGTCTCATGAACTTAATTGAGAAAAA]

[+] EMBL AK105440             [CAAACCCCCTCGGCGACCAAACCAGAGCGCGGGGGGGCGATGGCGGTGCGGAGACGGGGGGCGTCGGCGGTGGCCGTGCACGGCGGCGGCGGCCGGGTGCCGAAGCGGGCGCGGGTGACGGCGGAGCCGTCGCTGCTCGACGTGCGGGCGTTCCCGGGGCAGAAGGAGGAGGGGGAGAAGCAGCCGGCGCGCGGCGGCGGGAAGAAGTCGTCGTCGTCGTCGTCGACGTTCCGGGCCCAGGTGAGGGGGTTCCTGGCGCGGTGCGCGGTGGCGGTGCCGGCGTCGGAGGCGGGTGAGTTGTCGCCGGGCATGTCGTCGTGGCACGTGGGGTTTACCACCGCCGGCGGCGAGGCGGTGGCGGTGATGGAGGTGGTGGAGGAGGAGGTGGCCAGGGCCAGGCGGGTCTACTGCGAGCACTGCACTGTTGCCGGCTGGAGCAAGCACCCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAACTGGCACCTCCAAAACCTGCAGGCGTTGCGGGTTCATGGTGGCACTGCAGGAAACAAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGACTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTTTGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCAACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGAAAAGTCTCAGTGATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGCTGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCTCAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCTCACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCAAGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGCAAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAAGAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGGGTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTCGATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATTCGATGCAACAGTGAGATGAACACTGTAGAGTACAGGCTTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACCTATTCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTTATATGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCAAGCAATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGTTGCACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAGCAGAGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGAGAGCATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATTGTGCAACTGCAAGCGACACAACACAAATCAAGCTCTTGTTTGGAGCAAAGGGGGCTGTCCACATCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGGGTGTGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAACGGACGATGACGGTGAGAGAATGCTATCCTGTGACACTTGCCATATGTGGATGCACACTAGGTGTGCTGGAATCAGTGATTTTGATAGGGTTCCAAAGAGATATGTATGTAAATCATGTAAACTAACCCACAAGCCGAAGAGCAGTGGTCCTAGGCTCATGTATAGTAGTGCACCTAACAAAAGATGTAAGACTGGCACAGGTTCCTTTAGCAATGCGGCTGAAGGATTACTGTGGCCTCAAATCAGCTAACATGTACATAACGATAACAAGGATTCATATGAGCCATGCCAGTTTTTCATGGCTGCAATTATGTAAACATTTGTAATGGTAAGTTGCCTGATGTCTCATGAACTTAATTGAGAAAAA]


>consensus_4566#0 CAAACCCCCTCGGCGACCAAACCAGAGCGCGGGGGGGCGATGGCGGTGCGGAGACGGGGG GCGTCGGCGGTGGCCGTGCACGGCGGCGGCGGCCGGGTGCCGAAGCGGGCGCGGGTGACG GCGGAGCCGTCGCTGCTCGACGTGCGGGCGTTCCCGGGGCAGAAGGAGGAGGGGGAGAAG CAGCCGGCGCGCGGCGGCGGGAAGAAGTCGTCGTCGTCGTCGTCGACGTTCCGGGCCCAG GTGAGGGGGTTCCTGGCGCGGTGCGCGGTGGCGGTGCCGGCGTCGGAGGCGGGTGAGTTG TCGCCGGGCATGTCGTCGTGGCACGTGGGGTTTACCACCGCCGGCGGCGAGGCGGTGGCG GTGATGGAGGTGGTGGAGGAGGAGGTGGCCAGGGCCAGGCGGGTCTACTGCGAGCACTGC ACTGTTGCCGGCTGGAGCAAGCACCCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGC AATGAGAATGAAACTGGCACCTCCAAAACCTGCAGGCGTTGCGGGTTCATGGTGGCACTG CAGGAAACAAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGAT TGGGACTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAAC GGGTTTGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGA TCCCAACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGAAAAGTCTCA GTGATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACT GGCTGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACA CCTCAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTC CCTCACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTC TCAAGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACC GGCAAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCT GAAGAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGA TGGGTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTG GTCGATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCA ATTCGATGCAACAGTGAGATGAACACTGTAGAGTACAGGCTTACGACTGAAACCCTCTTC CCACCAAACAACGTGTGCACCCTAACCCAAGACCACCTATTCCGTGACATCAAGTTCTTG TATGATGCGCTTCTCTACCCATACACAATGCATCCTTATATGCCAGAAGAAAATTATCAG CATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCAAGCAATTCATCAAGCATTATGAT CTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGTTGCACATTTGGTGCCAAGTGGAA CTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAGCAGAGCTCATAACTCTTCCACAG GCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGAGAGCATTTCGAGACATCTACCTA ATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATTGTGCAACTGCAAGCGACACAACA CAAATCAAGCTCTTGTTTGGAGCAAAGGGGGCTGTCCACATCAAAGGCAGGTGCATTGGT GGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGGGTGTGGACAAATGGACAGTTAAA TGCTCCTGTGGAGCAACGGACGATGACGGTGAGAGAATGCTATCCTGTGACACTTGCCAT ATGTGGATGCACACTAGGTGTGCTGGAATCAGTGATTTTGATAGGGTTCCAAAGAGATAT GTATGTAAATCATGTAAACTAACCCACAAGCCGAAGAGCAGTGGTCCTAGGCTCATGTAT AGTAGTGCACCTAACAAAAGATGTAAGACTGGCACAGGTTCCTTTAGCAATGCGGCTGAA GGATTACTGTGGCCTCAAATCAGCTAACATGTACATAACGATAACAAGGATTCATATGAG CCATGCCAGTTTTTCATGGCTGCAATTATGTAAACATTTGTAATGGTAAGTTGCCTGATG TCTCATGAACTTAATTGAGAAAAA



consensusID : consensus_4566#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2257
fasta sequence
                              [TGATGTCATATTATGTTTGAATGAACTTGGATTGCCTCTGCAATAAATTGGGAATGTATTTAGGAGGATGAAAAAAAAAAAGATAAATTGAAGTGGAGGAAGAAAAAAATTACTATTTGGGAGGATGGAAAAAAAGATAAGAACTGAAGTGAAAAAGAAAATTGATGAAGGAGCAGTATTTTGGGAGGAGAAAATGATATAATTGAAGTGCAAATGAGAAAAAAAAAGTTTGAGGGAGGTGAAAGCCCGTTATTCATGTATCTATATTTCATTCACACTTGAACTAAATTCGTCGGAATGCATTAATCTCTGCAACGTCTGGATTGAACTACGCAAATTGCTGCCTTAAATACATTGTAATGTTTGCATGCCGGTTGTGAACTGAACAAATCTAGATGTTATTATAACTATTCCAGCGCTATAAAATGAGCTGGATTGATTGATATATAGATATGTTTGATTGCTTATTATAGCAACTCAATTCTGGATGAAATCTAAATTTACTTGCCTTATTGTTACATAGGCTGGAGCAAGCACCCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAATTGGCGCCTCCAAAACCTGCAGGCGTTGCGGGTTCATGGTGGCATGTGTGGCCTCATCTTGNGAATGTTGTCCTCAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGACTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTTTGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCAACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGGTAAAGTGATGATTTATGATTAATGAACTCAACACAAACAAAGCCAATATCATTCAATTCAACACTTCTAATTTATAATCAGCAGATGATACTAACATGTCAAAAAACTTGATAAATTGCAGAAAAGTCTCAGTGATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGCTGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCTCAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCTCACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCAAGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGCAAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAAGAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGGGTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTCGATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATTCGATGCAACAGTGAGATGAACACTGTAGAGTACAGGTTGGTGGCTCATATCTTTGTTACAACTTGCATGCTAACTAAGTGCTTGTTTCATGATCCAAATTCTAACTACTATCTCACTGCAGGCTTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACCTATTCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTTATATGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCAAGCAATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGTTGCACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAGCAGAGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGAGAGCATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATTGTGCAACTGCAAGCGACACAACACAAATCAAGCCCTTGTTTGGAGCAAAGGGGGCTGTCCACATCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGGGTGTGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAAC]

[-] EMBL CA764581             [TGATGTCATATTATGTTTGAATGAACTTGGATTGCCTCTGCAATAAATTGGGAATGTATTTAGGAGGATGAAAAAAAAAAAGATAAATTGAAGTGGAGGAAGAAAAAAATTACTATTTGGGAGGATGGAAAAAAAGATAAGAACTGAAGTGAAAAAGAAAATTGATGAAGGAGCAGTATTTTGGGAGGAGAAAATGATATAATTGAAGTGCAAATGAGAAAAAAAAAGTTTGAGGGAGGTGAAAGCCCGTTATTCATGTATCTATATTTCATTCACACTTGAACTAAATTCGTCGGAATGCATTAATCTCTGCAACGTCTGGATTGAACTACGCAAATTGCTGCCTTAAATACATTGTAATGTTTGCATGCCGGTTGTGAACTGAACAAATCTAGATGTTATTATAACTATTCCAGCGCTATAAAATGAGCTGGATTGATTGATATATAGATATGTTTGATTGCTTATTATAGCAACTCAATTCTGGATGAAATCTAAATTTACTTGCCTTATTGTTACATAGGCTGGAGCAAGCACCCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAATTGGCGCCTCCAAAACCTGCAGGCGTTGCGGGTTCATGGTGGCATGTGTGGCCTCATCTTGN                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AK108764             [                                                                                                                                                                                                                                                                                                                                                                                                                          TTCCAGCGCTATAAAATGAGCTGGATTGATTGATATATAGATATGTTTGATTGCTTATTATTGCAACTCAATTCTGGATGAAATCTAAATTTACTTGCCTTATTGTTACATAGGCTGGAGCAAGCACCCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAACTGGCACCTCCAAAACCTGCAGGCGTTGCGGGTTCATGGTGGCATGTGTGGCCTCATCTTGTGAATGTTGTCCTCAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGACTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTTTGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCAACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGGTAAAGTGATGATTTATGATTAATGAACTCAACACAAACAAAGCCAATATCATTCAATTCAACACTTCTAATTTATAATCAGCAGATGATACTAACATGTCAAAAAACTTGATAAATTGCAGAAAAGTCTCAGTGATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGCTGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCTCAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCTCACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCAAGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGCAAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAAGAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGGGTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTCGATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATTCGATGCAACAGTGAGATGAACACTGTAGAGTACAGGTTGGTGGCTCATATCTTTGTTACAACTTGCATGCTAACTAAGTGCTTGTTTCATGATCCAAATTCTAACTACTATCTCACTGCAGGCTTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACCTATTCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTTATATGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCAAGCAATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGTTGCACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAGCAGAGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGAGAGCATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATTGTGCAACTGCAAGCGACACAACACAAATCAAGCCCTTGTTTGGAGCAAAGGGGGCTGTCCACATCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGGGTGTGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAAC]


>consensus_4566#1 TGATGTCATATTATGTTTGAATGAACTTGGATTGCCTCTGCAATAAATTGGGAATGTATT TAGGAGGATGAAAAAAAAAAAGATAAATTGAAGTGGAGGAAGAAAAAAATTACTATTTGG GAGGATGGAAAAAAAGATAAGAACTGAAGTGAAAAAGAAAATTGATGAAGGAGCAGTATT TTGGGAGGAGAAAATGATATAATTGAAGTGCAAATGAGAAAAAAAAAGTTTGAGGGAGGT GAAAGCCCGTTATTCATGTATCTATATTTCATTCACACTTGAACTAAATTCGTCGGAATG CATTAATCTCTGCAACGTCTGGATTGAACTACGCAAATTGCTGCCTTAAATACATTGTAA TGTTTGCATGCCGGTTGTGAACTGAACAAATCTAGATGTTATTATAACTATTCCAGCGCT ATAAAATGAGCTGGATTGATTGATATATAGATATGTTTGATTGCTTATTATAGCAACTCA ATTCTGGATGAAATCTAAATTTACTTGCCTTATTGTTACATAGGCTGGAGCAAGCACCCT GTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAATTGGCGCCTCCAAA ACCTGCAGGCGTTGCGGGTTCATGGTGGCATGTGTGGCCTCATCTTGNGAATGTTGTCCT CAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGACTA TGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTTTGG CCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCAACT GATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGGTAAAGTGATGATTTATG ATTAATGAACTCAACACAAACAAAGCCAATATCATTCAATTCAACACTTCTAATTTATAA TCAGCAGATGATACTAACATGTCAAAAAACTTGATAAATTGCAGAAAAGTCTCAGTGATA GATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGCTGT TCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCTCAA GACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCTCAC ACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCAAGG CACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGCAAG AGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAAGAG GAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGGGTT GCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTCGAT TACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATTCGA TGCAACAGTGAGATGAACACTGTAGAGTACAGGTTGGTGGCTCATATCTTTGTTACAACT TGCATGCTAACTAAGTGCTTGTTTCATGATCCAAATTCTAACTACTATCTCACTGCAGGC TTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACCTAT TCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTTATA TGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCAAGC AATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGTTGC ACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAGCAG AGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGAGAG CATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATTGTG CAACTGCAAGCGACACAACACAAATCAAGCCCTTGTTTGGAGCAAAGGGGGCTGTCCACA TCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGGGTG TGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4566#0      ---------------------------CAAACCCCCTCGGCGACCAAACCAGAGCGCGGG 33
consensus_4566#1      TGATGTCATATTATGTTTGAATGAACTTGGATTGCCTCTGCAATAAATTGGGAATGTATT 60
                                                    *   **** ** *  **    **  *    

consensus_4566#0      -GGGGCGATGGCGGTGCGGA-GACGGGGGGCGTCGGCGGTGGCCGTGCACGGCGGCGGCG 91
consensus_4566#1      TAGGAGGATGAAAAAAAAAAAGATAAATTGAAGTGGAGGAAGAAAAAAATTACTATT-TG 119
                        **  ****         * **      *    ** **  *      *   *      *

consensus_4566#0      GCCGGGTGCCGAAGCGGGCGCGGGTGACGGCGGAGCCGTCGCTGCTCGACGTGCGGGCGT 151
consensus_4566#1      GGAGGATGGAAAAAAAGATAAGAACTGAAGTGAAAAAGAAAATTGATGAAGGAGCAGTAT 179
                      *  ** **   **   *    *       * * *   *    *    ** *     *  *

consensus_4566#0      TCCCGGGGCAGAAG-----------GAGGAGGGGGAGAAGCAGCCGGCGCGCGGCGGCGG 200
consensus_4566#1      TTTGGGAGGAGAAAATGATATAATTGAAGTGCAAATGAGAAAAAAAAAGTTTGAGGGAGG 239
                      *   ** * ****            ** * *     **   *      *   *  ** **

consensus_4566#0      GAAGAAGTCGTCGTCGTCGTCGTCGACGTTCCGGGCCCAGGTGAGGGGGTTCCTGGCGCG 260
consensus_4566#1      TGAAAGCCCGTTATTCATGT-ATCTATATTTCATTCACACTTGAACTAAATTC-GTCGGA 297
                        * *   ***  *    **  ** *  ** *   * **  ***      * * * **  

consensus_4566#0      GTGCGC-GGTGGCGGTGCCGGC--GTCGGAGGCGGGTGAGTTGTCGCC--GGGCATGTCG 315
consensus_4566#1      ATGCATTAATCTCTGCAACGTCTGGATTGAACTACGCAAATTGCTGCCTTAAATACATTG 357
                       ***     *  * *   ** *  *   **     *  * ***  ***      *  * *

consensus_4566#0      TCGTG---GCACGTGGGGTTT-ACCACCGCCGGCGGCGAGGCGGTGGCGGTGATGGAGGT 371
consensus_4566#1      TAATGTTTGCATGCCGGTTGTGAACTGAACAAATCTAGATGTTATTATAACTATTCCAGC 417
                      *  **   *** *  ** * * * *    *       ** *   *       **    * 

consensus_4566#0      GGTGGAGGAGGAGGTGGCCAGGGC------CAGGCGGGTCT-ACTGCG------AGCA-- 416
consensus_4566#1      GCTATAAAATGAGCTGGATTGATTGATATATAGATATGTTTGATTGCTTATTATAGCAAC 477
                      * *  *  * *** ***   *          **    ** * * ***       ****  

consensus_4566#0      ---------------------------CTGCACTGTTGCC-----GGCTGGAGCAAGCAC 444
consensus_4566#1      TCAATTCTGGATGAAATCTAAATTTACTTGCCTTATTGTTACATAGGCTGGAGCAAGCAC 537
                                                  ***  * ***       ***************

consensus_4566#0      CCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAACTGGCACCTCC 504
consensus_4566#1      CCTGTTTGCTCCAAGAGGTACCACTTCATAATTCGCAATGAGAATGAAATTGGCGCCTCC 597
                      ************************************************* **** *****

consensus_4566#0      AAAACCTGCAGGCGTTGCGGGTTCATGGTGGCAC-----------TGCAGGAAACA---- 549
consensus_4566#1      AAAACCTGCAGGCGTTGCGGGTTCATGGTGGCATGTGTGGCCTCATCTTGNGAATGTTGT 657
                      *********************************            *   *  **      

consensus_4566#0      ----AGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGA 605
consensus_4566#1      CCTCAGATGTCCGTCCTGCAACCACGTTGGCCTCTCACGGGATGATCCGGAAGATTGGGA 717
                          ********************************************************

consensus_4566#0      CTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTT 665
consensus_4566#1      CTATGTGCAGCTGGAGAGTCCACGGCATCTGCTGCATGGCATAGTCCATGAAAACGGGTT 777
                      ************************************************************

consensus_4566#0      TGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCA 725
consensus_4566#1      TGGCCACCTTGTTCGGATTAATGGCCGTGAGGGAGGCTCCAGCGTCATGACAGGATCCCA 837
                      ************************************************************

consensus_4566#0      ACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAG--------------- 770
consensus_4566#1      ACTGATTAACTTCTGGGATCGGCTCTGCAGATACCTCAGGGTCAGGTAAAGTGATGATTT 897
                      *********************************************               

consensus_4566#0      ------------------------------------------------------------
consensus_4566#1      ATGATTAATGAACTCAACACAAACAAAGCCAATATCATTCAATTCAACACTTCTAATTTA 957
                                                                                  

consensus_4566#0      -----------------------------------------------AAAAGTCTCAGTG 783
consensus_4566#1      TAATCAGCAGATGATACTAACATGTCAAAAAACTTGATAAATTGCAGAAAAGTCTCAGTG 1017
                                                                     *************

consensus_4566#0      ATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGC 843
consensus_4566#1      ATAGATGTTTCGAAGAAGTATGGAGCTGACTACCGAAGCCTCCATGCTGTTGCCACTGGC 1077
                      ************************************************************

consensus_4566#0      TGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCT 903
consensus_4566#1      TGTTCTTGGTATGGCCTGTGGGGATTCAAACTTAGCAGCGGAAGCTTTGGAATCACACCT 1137
                      ************************************************************

consensus_4566#0      CAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCT 963
consensus_4566#1      CAAGACTACTCCAAAGCTGTAGAAAGCCTATCCTCAGTGCCACTCTCTAACTTCTTCCCT 1197
                      ************************************************************

consensus_4566#0      CACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCA 1023
consensus_4566#1      CACACCCGATCTCCACGAAACCAGTTACAAAATACCATTGCATTCTACCAATCTCTCTCA 1257
                      ************************************************************

consensus_4566#0      AGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGC 1083
consensus_4566#1      AGGCACCCTCTCACCACAATCCGTGAACTGTTCGCCTATATAATGGAGCTTGCCACCGGC 1317
                      ************************************************************

consensus_4566#0      AAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAA 1143
consensus_4566#1      AAGAGTGTGCACAAAGAGAAAATGGCATATGATGCCAATTATCAAGAGGAATTCCCTGAA 1377
                      ************************************************************

consensus_4566#0      GAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGG 1203
consensus_4566#1      GAGGAATTACAGCGAGCAACAAACATTGCTCTCAAAATTCTCCGTGCTGCAGATAGATGG 1437
                      ************************************************************

consensus_4566#0      GTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTC 1263
consensus_4566#1      GTTGCTACACGGACACTAAAGGCAGTTACATCCCATCCAATTGGTTCGCCACAGCTGGTC 1497
                      ************************************************************

consensus_4566#0      GATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATT 1323
consensus_4566#1      GATTACTGCATCAAGACCCTTGGTGGTACAAGAACTGACGATGGGATGGTTGTTGCAATT 1557
                      ************************************************************

consensus_4566#0      CGATGCAACAGTGAGATGAACACTGTAGAGTACAGG------------------------ 1359
consensus_4566#1      CGATGCAACAGTGAGATGAACACTGTAGAGTACAGGTTGGTGGCTCATATCTTTGTTACA 1617
                      ************************************                        

consensus_4566#0      ------------------------------------------------------------
consensus_4566#1      ACTTGCATGCTAACTAAGTGCTTGTTTCATGATCCAAATTCTAACTACTATCTCACTGCA 1677
                                                                                  

consensus_4566#0      --CTTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACC 1417
consensus_4566#1      GGCTTACGACTGAAACCCTCTTCCCACCAAACAACGTGTGCACCCTAACCCAAGACCACC 1737
                        **********************************************************

consensus_4566#0      TATTCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTT 1477
consensus_4566#1      TATTCCGTGACATCAAGTTCTTGTATGATGCGCTTCTCTACCCATACACAATGCATCCTT 1797
                      ************************************************************

consensus_4566#0      ATATGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCA 1537
consensus_4566#1      ATATGCCAGAAGAAAATTATCAGCATGCCAAGAGGTCTGCAATGATCCTTTTGGACTGCA 1857
                      ************************************************************

consensus_4566#0      AGCAATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGT 1597
consensus_4566#1      AGCAATTCATCAAGCATTATGATCTGGAAGAAGACTTCTTACCTCAAAACCCATCCCAGT 1917
                      ************************************************************

consensus_4566#0      TGCACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAG 1657
consensus_4566#1      TGCACATTTGGTGCCAAGTGGAACTAGCTGACCAGGTTGATGATCCACCTTGTATCCCAG 1977
                      ************************************************************

consensus_4566#0      CAGAGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGA 1717
consensus_4566#1      CAGAGCTCATAACTCTTCCACAGGCAGCAACTATCGCTGATCTCAAAGGGGAGGCTGCGA 2037
                      ************************************************************

consensus_4566#0      GAGCATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATT 1777
consensus_4566#1      GAGCATTTCGAGACATCTACCTAATGTTACAGAGTTTTGTAGCTGACCAGCTTCTTGATT 2097
                      ************************************************************

consensus_4566#0      GTGCAACTGCAAGCGACACAACACAAATCAAGCTCTTGTTTGGAGCAAAGGGGGCTGTCC 1837
consensus_4566#1      GTGCAACTGCAAGCGACACAACACAAATCAAGCCCTTGTTTGGAGCAAAGGGGGCTGTCC 2157
                      ********************************* **************************

consensus_4566#0      ACATCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGG 1897
consensus_4566#1      ACATCAAAGGCAGGTGCATTGGTGGTGAAAGACGGTTTGCAATTTACCGGATGGAGAGGG 2217
                      ************************************************************

consensus_4566#0      GTGTGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAACGGACGATGACGGTGAGAGAA 1957
consensus_4566#1      GTGTGGACAAATGGACAGTTAAATGCTCCTGTGGAGCAAC-------------------- 2257
                      ****************************************                    

consensus_4566#0      TGCTATCCTGTGACACTTGCCATATGTGGATGCACACTAGGTGTGCTGGAATCAGTGATT 2017
consensus_4566#1      ------------------------------------------------------------
                                                                                  

consensus_4566#0      TTGATAGGGTTCCAAAGAGATATGTATGTAAATCATGTAAACTAACCCACAAGCCGAAGA 2077
consensus_4566#1      ------------------------------------------------------------
                                                                                  

consensus_4566#0      GCAGTGGTCCTAGGCTCATGTATAGTAGTGCACCTAACAAAAGATGTAAGACTGGCACAG 2137
consensus_4566#1      ------------------------------------------------------------
                                                                                  

consensus_4566#0      GTTCCTTTAGCAATGCGGCTGAAGGATTACTGTGGCCTCAAATCAGCTAACATGTACATA 2197
consensus_4566#1      ------------------------------------------------------------
                                                                                  

consensus_4566#0      ACGATAACAAGGATTCATATGAGCCATGCCAGTTTTTCATGGCTGCAATTATGTAAACAT 2257
consensus_4566#1      ------------------------------------------------------------
                                                                                  

consensus_4566#0      TTGTAATGGTAAGTTGCCTGATGTCTCATGAACTTAATTGAGAAAAA 2304
consensus_4566#1      -----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)