cluster # 4580

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4580 cluster # 4580 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4580#0 length = 2719 sequences # 3
consensusID : consensus_4580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2719
fasta sequence
                              [CTCCGCCTCCTGCGACGAAGCGAAGCGAGACGCCTCCGCCTCGCGCGAGCCACCACGAGCACCTCGACACGGGAGTCCGAATCCTCCTCCTCCCCCCTCCATTGGAGGCCTCCGAGGTGATGGATTCAGTGTCATTGTCACTACTCGATAGTATTTCAAATTTCCGGGTGCTGTCTTCAAGCAATGCCTCGAAAACAGAGCTAGTTAAGAAATATTGCCAAACGATGGATGGCATCCTTGATCACTTGGAGGTGGCCCTAAACAGAGCTTTTCCTCAGATTACTCCAGATGGTGAACTAAGTAAAGTGCTTGAAGAACTTGGCGCTACCATCAATGAAGCGACTGAGCTAGTTGGAGGCTGGAATCAAATGATGAGCAAGATTTATTTTGTTATTCAGGCTGATTCAATTATTGCCAAGATGCAGATATATGTATTCGAATTATGCCAAATTGTCAATTCTCTCATGCAGATTGAGTCAATGCATTTGGAGGATCTTGAACACGATAGCTGTGGAAAAATTTCAGATGTCATTAGGGAGGCTTCCAGGGCTTTAGCAGGGGAAGTTATGCCAAATTCAGAGGAATTTGGAAAGATTCAAACTACTTTGAGCTTATCCACAAATCAGGAGTTGCTGATGGAATATGTTGCACTTGTTAAGGTTAAAACAAAAGGTAATCATGAAGATAACAAAGAAATGGATGATATTAACGATATTGTTGAATTAGTCAACCATATGCTTGACAAACATGTGGAAGAAAAGCAAACACGTAGCATTAATGGAGTGACCATTCCTGCTGATTTTTGTTGTCCTCTTTCCCTTGAACTAATGTCGGATCCAGTGATTGTGGCATCTGGTCAAACGTATGAGCATGTTTTTATCAGAAAATGGTTTGATCTGGGATACAACATTTGTCCAAAGACACGCCAAATATTGGGACACACCAAATTGATTCCTAACTTCACTGTCAAACAGTTGATTGAAAATTGGTGTGAGGTACATGGTATAATGCTACCAGATCCTGTTAAACTCTTGAGTTTGTGCTTCCCTGTTTCCCTCAACATCACAGATGGAAGTGCAAGTGCAGACAAGTCTGGATCACCAGAACACTGCCAATTGGTAGCTGCATTGCATCCAAAAGCACAGTGCGCATCGGATGATAGTCATCATTATAATTTGATACATGAAAACTCTGATTCAGATGATAGAGTGTCATCATTTGGAGACACAGATGATTCTGAACCTGATTCTTTAAGATTATCAACAGAAACTACTGCAGCAAACAAATCTCTACTTGATGAAAAAACTGATCGTTCTGATGGTCTTAAGCAATTGAGAGACAATGGTTTTCAAGTTTCTGATGAGGAACAGTATCTCGAAAGGAATGGTAAAAGTCATATCAGCAGCCATCATCAACTTGAAGTTGATGGAGAGAATGTCAGGGTACAAGCATCAAGTGACATCAATGCATCTGAAGTTATGCAAGATGATCCGGTCACCACATGTTCAAAGGTATCAGATAACCCTCCTAGATTGGGTGGTGTTCGTTCTCGAAATCAGCCAAACTGGTGGAGACAGTCTAATAAAACTATTCCTAGGATCGGATTGTCATCTTCGACAGATTCAAAACCAGATTTTTCTGGCAATGATGCTAAAGTGCGTAATCTTATCGAGGAACTGAAAAGTGATTCTGCTGAGGTCCAAAGGTCAGCAACAGGAGAGCTCCGCATTCTTTCTAGACACAGCTTGGAGAATAGAATTGCCATCGCAAACTGCGGAGCAATCCCCTTCTTGGTGAGTCTACTTCATTCTACAGACCCCAGCACACAAGAAAATGCTGTGACAATTCTCCTGAATTTGTCATTGGATGACAATAACAAGATTGCCATAGCAAGTGCTGAGGCCATTGAGCCTCTCATCTTCGTTCTTCAGGTGGGAAACCCCGAAGCGAAAGCCAACTCAGCTGCAACTTTATTCAGCCTCTCAGTCATTGAAGAGAACAAGATCAAGATTGGACGTTCCGGTGCCATCGAACCATTAGTAGATTTACTGGGAGAAGGTACCCCGCAAGGGAAGAAGGATGCAGCTACTGCACTCTTCAATCTGTCGATATTTCATGAACACAAGACCCGCATTGTTCAGGCTGGGGCTGTCAACCACCTGGTGGAGCTGATGGATCCAGCTGCTGGGATGGTTGATAAAGCTGTTGCTGTTCTGGCAAACCTTGCGACTGTGCATGATGGAAGGAATGCCATTGCTCAGGCAGGAGGCATCCGAGTACTGGTTGAGGTTGTTGAGCTGGGTTCTGCACGTTCAAAGGAGAATGCCGCTGCTGCCCTGCTACAACTCTGCACAAACAGTAACAGGTTTTGCACCCTGGTTCTTCAAGAAGGCGTCGTGCCACCTTTGGTTGCATTGTCGCAATCAGGCACAGCCCGTGCAAGAGAGAAGGCTCAGGTTCTTCTAAGCTATTTTCGCAACCAGCGCCACGTCAGGGTTGGGAGAGGGTAAGTCTACGCAATTAAGCAGCAATGCGGCGGTCTGATTATTGTTCCATGATCCCGTTGGCCGGGCAATTAAGAGATGTATATTCCATCCTAGTCGTAGCATATTTTTTCTGGTAGTGATTCCAAATGATTGATGTCACAAGTTGCTTCCTGTAAAGAAGACCCATCTATTGTGTATACA-TGGTTTTCACGATATTTAGTTCAAAAAAAAAA]

[+] EMBL AK072566             [CTCCGCCTCCTGCGACGAAGCGAAGCGAGACGCCTCCGCCTCGCGCGAGCCACCACGAGCACCTCGACACGGGAGTCCGAATCCTCCTCCTCCCCCCTCCATTGGAGGCCTCCGAGGTGATGGATTCAGTGTCATTGTCACTACTCGATAGTATTTCAAATTTCCGGGTGCTGTCTTCAAGCAATGCCTCGAAAACAGAGCTAGTTAAGAAATATTGCCAAACGATGGATGGCATCCTTGATCACTTGGAGGTGGCCCTAAACAGAGCTTTTCCTCAGATTACTCCAGATGGTGAACTAAGTAAAGTGCTTGAAGAACTTGGCGCTACCATCAATGAAGCGACTGAGCTAGTTGGAGGCTGGAATCAAATGATGAGCAAGATTTATTTTGTTATTCAGGCTGATTCAATTATTGCCAAGATGCAGATATATGTATTCGAATTATGCCAAATTGTCAATTCTCTCATGCAGATTGAGTCAATGCATTTGGAGGATCTTGAACACGATAGCTGTGGAAAAATTTCAGATGTCATTAGGGAGGCTTCCAGGGCTTTAGCAGGGGAAGTTATGCCAAATTCAGAGGAATTTGGAAAGATTCAAACTACTTTGAGCTTATCCACAAATCAGGAGTTGCTGATGGAATATGTTGCACTTGTTAAGGTTAAAACAAAAGGTAATCATGAAGATAACAAAGAAATGGATGATATTAACGATATTGTTGAATTAGTCAACCATATGCTTGACAAACATGTGGAAGAAAAGCAAACACGTAGCATTAATGGAGTGACCATTCCTGCTGATTTTTGTTGTCCTCTTTCCCTTGAACTAATGTCGGATCCAGTGATTGTGGCATCTGGTCAAACGTATGAGCATGTTTTTATCAGAAAATGGTTTGATCTGGGATACAACATTTGTCCAAAGACACGCCAAATATTGGGACACACCAAATTGATTCCTAACTTCACTGTCAAACAGTTGATTGAAAATTGGTGTGAGGTACATGGTATAATGCTACCAGATCCTGTTAAACTCTTGAGTTTGTGCTTCCCTGTTTCCCTCAACATCACAGATGGAAGTGCAAGTGCAGACAAGTCTGGATCACCAGAACACTGCCAATTGGTAGCTGCATTGCATCCAAAAGCACAGTGCGCATCGGATGATAGTCATCATTATAATTTGATACATGAAAACTCTGATTCAGATGATAGAGTGTCATCATTTGGAGACACAGATGATTCTGAACCTGATTCTTTAAGATTATCAACAGAAACTACTGCAGCAAACAAATCTCTACTTGATGAAAAAACTGATCGTTCTGATGGTCTTAAGCAATTGAGAGACAATGGTTTTCAAGTTTCTGATGAGGAACAGTATCTCGAAAGGAATGGTAAAAGTCATATCAGCAGCCATCATCAACTTGAAGTTGATGGAGAGAATGTCAGGGTACAAGCATCAAGTGACATCAATGCATCTGAAGTTATGCAAGATGATCCGGTCACCACATGTTCAAAGGTATCAGATAACCCTCCTAGATTGGGTGGTGTTCGTTCTCGAAATCAGCCAAACTGGTGGAGACAGTCTAATAAAACTATTCCTAGGATCGGATTGTCATCTTCGACAGATTCAAAACCAGATTTTTCTGGCAATGATGCTAAAGTGCGTAATCTTATCGAGGAACTGAAAAGTGATTCTGCTGAGGTCCAAAGGTCAGCAACAGGAGAGCTCCGCATTCTTTCTAGACACAGCTTGGAGAATAGAATTGCCATCGCAAACTGCGGAGCAATCCCCTTCTTGGTGAGTCTACTTCATTCTACAGACCCCAGCACACAAGAAAATGCTGTGACAATTCTCCTGAATTTGTCATTGGATGACAATAACAAGATTGCCATAGCAAGTGCTGAGGCCATTGAGCCTCTCATCTTCGTTCTTCAGGTGGGAAACCCCGAAGCGAAAGCCAACTCAGCTGCAACTTTATTCAGCCTCTCAGTCATTGAAGAGAACAAGATCAAGATTGGACGTTCCGGTGCCATCGAACCATTAGTAGATTTACTGGGAGAAGGTACCCCGCAAGGGAAGAAGGATGCAGCTACTGCACTCTTCAATCTGTCGATATTTCATGAACACAAGACCCGCATTGTTCAGGCTGGGGCTGTCAACCACCTGGTGGAGCTGATGGATCCAGCTGCTGGGATGGTTGATAAAGCTGTTGCTGTTCTGGCAAACCTTGCGACTGTGCATGATGGAAGGAATGCCATTGCTCAGGCAGGAGGCATCCGAGTACTGGTTGAGGTTGTTGAGCTGGGTTCTGCACGTTCAAAGGAGAATGCCGCTGCTGCCCTGCTACAACTCTGCACAAACAGTAACAGGTTTTGCACCCTGGTTCTTCAAGAAGGCGTCGTGCCACCTTTGGTTGCATTGTCGCAATCAGGCACAGCCCGTGCAAGAGAGAAGGCTCAGGTTCTTCTAAGCTATTTTCGCAACCAGCGCCACGTCAGGGTTGGGAGAGGGTAAGTCTACGCAATTAAGCAGCAATGCGGCGGTCTGATTATTGTTCCATGATCCCGTTGGCCGGGCAATTAAGAGATGTATATTCCATCCTAGTCGTAGCATATTTTTTCTGGTAGTGATTCCAAATGATTGATGTCACAAGTTGCTTCCTGTAAAGAAGACCCATCTATTGTGTATACA TGGTTTTCACGATATTTAG             ]
[+] EMBL CF326076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAAATTGATTCCTAACTTCACTGTCAAACAGTTGATTGAAAATTGGTGTGAGGTACATGGTATAATGCTACCAGATCCTGTTAAACTCTTGAGTTTGTGCTTCCCTGTTTCCCTCAACATCACAGATGGAAGTGCAAGTGCAGACAAGTCTGGATCACCAGAACACTGCCAATTGGTAGCTGCATTGCATCCAAAAGCACAGTGCGCATCGGATGATAGTCATCATTATAATTTGATACATGAAAACTCTGATTCAGATGATAGAGTGTCATCATTTGGAGACACAGATGATTCTGAACCTGATTCTTTAAGATTATCAACAGAAACTACTGCAGCAAACAAATCTCTACTTGATGAAAAAACTGATCGTTCTGATGGTCTTAAGCAATTGAGAGACAATGGTTTTCAAGTTTCTGATGAGGAACAGTATCTCGAAAGGAATGGTAAAAGTCATATCAGCAGCCATCATCAACTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BI812163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tGCC GGC ATTAAGAGATGTATATTCCATCCTAGTCGTAGCATATTTTTTCTGGTAGTGATTCCGAATGATTGATGTCACAAGTTGCTTCCTGTAAAGAAGACCCATCTATTGTGTATACACTGGTTTTCACGATATTTAGTTCAAAAAAAAAA]




>consensus_4580#0
CTCCGCCTCCTGCGACGAAGCGAAGCGAGACGCCTCCGCCTCGCGCGAGCCACCACGAGC
ACCTCGACACGGGAGTCCGAATCCTCCTCCTCCCCCCTCCATTGGAGGCCTCCGAGGTGA
TGGATTCAGTGTCATTGTCACTACTCGATAGTATTTCAAATTTCCGGGTGCTGTCTTCAA
GCAATGCCTCGAAAACAGAGCTAGTTAAGAAATATTGCCAAACGATGGATGGCATCCTTG
ATCACTTGGAGGTGGCCCTAAACAGAGCTTTTCCTCAGATTACTCCAGATGGTGAACTAA
GTAAAGTGCTTGAAGAACTTGGCGCTACCATCAATGAAGCGACTGAGCTAGTTGGAGGCT
GGAATCAAATGATGAGCAAGATTTATTTTGTTATTCAGGCTGATTCAATTATTGCCAAGA
TGCAGATATATGTATTCGAATTATGCCAAATTGTCAATTCTCTCATGCAGATTGAGTCAA
TGCATTTGGAGGATCTTGAACACGATAGCTGTGGAAAAATTTCAGATGTCATTAGGGAGG
CTTCCAGGGCTTTAGCAGGGGAAGTTATGCCAAATTCAGAGGAATTTGGAAAGATTCAAA
CTACTTTGAGCTTATCCACAAATCAGGAGTTGCTGATGGAATATGTTGCACTTGTTAAGG
TTAAAACAAAAGGTAATCATGAAGATAACAAAGAAATGGATGATATTAACGATATTGTTG
AATTAGTCAACCATATGCTTGACAAACATGTGGAAGAAAAGCAAACACGTAGCATTAATG
GAGTGACCATTCCTGCTGATTTTTGTTGTCCTCTTTCCCTTGAACTAATGTCGGATCCAG
TGATTGTGGCATCTGGTCAAACGTATGAGCATGTTTTTATCAGAAAATGGTTTGATCTGG
GATACAACATTTGTCCAAAGACACGCCAAATATTGGGACACACCAAATTGATTCCTAACT
TCACTGTCAAACAGTTGATTGAAAATTGGTGTGAGGTACATGGTATAATGCTACCAGATC
CTGTTAAACTCTTGAGTTTGTGCTTCCCTGTTTCCCTCAACATCACAGATGGAAGTGCAA
GTGCAGACAAGTCTGGATCACCAGAACACTGCCAATTGGTAGCTGCATTGCATCCAAAAG
CACAGTGCGCATCGGATGATAGTCATCATTATAATTTGATACATGAAAACTCTGATTCAG
ATGATAGAGTGTCATCATTTGGAGACACAGATGATTCTGAACCTGATTCTTTAAGATTAT
CAACAGAAACTACTGCAGCAAACAAATCTCTACTTGATGAAAAAACTGATCGTTCTGATG
GTCTTAAGCAATTGAGAGACAATGGTTTTCAAGTTTCTGATGAGGAACAGTATCTCGAAA
GGAATGGTAAAAGTCATATCAGCAGCCATCATCAACTTGAAGTTGATGGAGAGAATGTCA
GGGTACAAGCATCAAGTGACATCAATGCATCTGAAGTTATGCAAGATGATCCGGTCACCA
CATGTTCAAAGGTATCAGATAACCCTCCTAGATTGGGTGGTGTTCGTTCTCGAAATCAGC
CAAACTGGTGGAGACAGTCTAATAAAACTATTCCTAGGATCGGATTGTCATCTTCGACAG
ATTCAAAACCAGATTTTTCTGGCAATGATGCTAAAGTGCGTAATCTTATCGAGGAACTGA
AAAGTGATTCTGCTGAGGTCCAAAGGTCAGCAACAGGAGAGCTCCGCATTCTTTCTAGAC
ACAGCTTGGAGAATAGAATTGCCATCGCAAACTGCGGAGCAATCCCCTTCTTGGTGAGTC
TACTTCATTCTACAGACCCCAGCACACAAGAAAATGCTGTGACAATTCTCCTGAATTTGT
CATTGGATGACAATAACAAGATTGCCATAGCAAGTGCTGAGGCCATTGAGCCTCTCATCT
TCGTTCTTCAGGTGGGAAACCCCGAAGCGAAAGCCAACTCAGCTGCAACTTTATTCAGCC
TCTCAGTCATTGAAGAGAACAAGATCAAGATTGGACGTTCCGGTGCCATCGAACCATTAG
TAGATTTACTGGGAGAAGGTACCCCGCAAGGGAAGAAGGATGCAGCTACTGCACTCTTCA
ATCTGTCGATATTTCATGAACACAAGACCCGCATTGTTCAGGCTGGGGCTGTCAACCACC
TGGTGGAGCTGATGGATCCAGCTGCTGGGATGGTTGATAAAGCTGTTGCTGTTCTGGCAA
ACCTTGCGACTGTGCATGATGGAAGGAATGCCATTGCTCAGGCAGGAGGCATCCGAGTAC
TGGTTGAGGTTGTTGAGCTGGGTTCTGCACGTTCAAAGGAGAATGCCGCTGCTGCCCTGC
TACAACTCTGCACAAACAGTAACAGGTTTTGCACCCTGGTTCTTCAAGAAGGCGTCGTGC
CACCTTTGGTTGCATTGTCGCAATCAGGCACAGCCCGTGCAAGAGAGAAGGCTCAGGTTC
TTCTAAGCTATTTTCGCAACCAGCGCCACGTCAGGGTTGGGAGAGGGTAAGTCTACGCAA
TTAAGCAGCAATGCGGCGGTCTGATTATTGTTCCATGATCCCGTTGGCCGGGCAATTAAG
AGATGTATATTCCATCCTAGTCGTAGCATATTTTTTCTGGTAGTGATTCCAAATGATTGA
TGTCACAAGTTGCTTCCTGTAAAGAAGACCCATCTATTGTGTATACATGGTTTTCACGAT
ATTTAGTTCAAAAAAAAAA
clustalw multiple alignements is not computed in this case