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Oryza sativa
cluster # 4591 cluster # 4591       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4591#0 length = 2515 sequences # 3  

consensusID : consensus_4591#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2515
fasta sequence
                              [AGTGGAGGTAGAGGGGATCAACTCCGGTCGGCGGCGGGATGTCGATGTCGGGGTCGGACTTCGGCGCCCCGTGCGACGACCCCAAGATCTTCCGCAACATCTGCCGGGATCGTATACTCAAGGACTTGCTGCAGCCGGACAAAGATAAGGAGACCAAAAGCTCATGGAAGGTTCTTATCATGGACAAATTTACGGTGAGGATCATGGCTTATGCCTGCAAGATGGCAGAAATTACCGATGCAGGAATCTCGTTGGTTGAAGATCTTTTCAAGCGAAGGGAGCCCATGCCTTCCATGGATGCAATCTACTTCCTCCAGCCACTGAAAGAAAATGTCATAATGCTTCTATCTGACATGTCTGGGAGATGTCCACTGTACAGGAAGGCATACATATTCTTTAGTTCACCGATTCCTAAGGAGCTGGTCTCTTACATAAAGAACGACAGCAGTGTGATACCACGTATTGGTGCACTAAGAGAGATGAATTTGGAGTTCTTTGCAATTGACATGCAGGGATTCACAACTGACCATGACATGGCATTCACTGATTTATATAGTGCTCAGCACAACTCGAAAAAGTTCAATGACACTATAAGCACTATGGCTACTCGCATTGCTACCACATTTGCTTCGTTGAAGGAATTTCCTTGTGTGCGGTATCGTGCCCCAAAGGGCACAGATCCAATGACAACACCAAAATTTGACATGGTTCCAAAATGGTTAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAATCAACAATACCTGAATTTCCCCAGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCTATAGATCAGATAGCACCTGTTATTCATGAATGGACCTATGATGCAATGTGCCATGATCTACTTGAAATGGATGGCCAAAAATACATATATGAGGTGTCGAAAGCGGGATCAGAACCTGAGAGAAAGGAGGCTTTATTGGAGGATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCACATAGCTGATGCTAGTGAGAGGTTGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAAGCAGCTCAACTTCATTCAAGAGATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCAGAAAA-CAAATTGAGGTTGCTTATT-ATATATGCAATTGTATATCCAGAGAAGTTTGAAGGTGACAAAGGGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATAAATAGTTTAAGATACTTGG-TTGGTTCAGATACAAAAAAGGCATCACGGCCTGGCGGCTTCTCTCTCAAATTTGATGCACAAAAGAAAAAAAATGCTGCGAGGACAGAACGGCAGGATGGCGATGAAACCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGAGTTGATTGAGAAACTGAGCAAAGGTGCATTACCTTTGAATGAATACCCATCCATGAGTGAACCCAGTTCCACTGAACAAGGATCTACACAAAGTGCAGCCGCGACTAAACCAGCACAAGCACAACCCATGTCCAGGAGATCGCGGCGGACACCAACCTGGGCTAAGTCTCGAAACTCTGATGATAGTCAATCAAGTGACTCCTCGGTCTTGAGACATGGATCTAATGACTTCAAGAGGCTAGGCAACCGAATTTTTGTCTTCATGATTGGTGGAGCCACTAGATCGGAACTGCGGACGGTGCACAAGCTTACTATGAAACTGAAGCGCGAAATTGTCCTGGGATCTTCTAGCATAGATGACCCTCCACAATTTATTTCGAAGCTGAAGATGCTAACTGCAGGTGGTGCCAATGACGTCTAAACTTCGCACTTAGTTTGCAAATCAACCGATGAAACAAACTTGTCACCTTTTGGTAAGAAACCCATTGCTACGAACAGTTAGAAACGTTGGATGTCATCAATGACTGGACTACTCACAATAATTACACGATTTTTTCATAGTCTAGTATATATACCAAGTGAGAAGAAGTGTCAAATGTACTTAAAACATGTATGTAGACAACATATTTTGCCCACATTATTTATTCTTCTTTCAGATGTAAAACGTAGAACAGTTGCGACAGTTGTTTTGCCCAAATTTGTATATTTATGAACACTACAACAATGACATGGTGACGATTACACTCATGGATCAATCGATTCCGATAATTCGTCGTGAAATCGAGTTATTTATGGCGATGTGGAAAATGGTTATAGAGGTGCGAATGTGCGACTTTATAGGCTAGTTATAGATGTAAGTTCAATGTGTATCGTATCTGTCGAGTTTGTATAGTTTTTTTTTTAACCGAGCTATGAAAT]

[+] EMBL AK100230             [AGTGGAGGTAGAGGGGATCAACTCCGGTCGGCGGCGGGATGTCGATGTCGGGGTCGGACTTCGGCGCCCCGTGCGACGACCCCAAGATCTTCCGCAACATCTGCCGGGATCGTATACTCAAGGACTTGCTGCAGCCGGACAAAGATAAGGAGACCAAAAGCTCATGGAAGGTTCTTATCATGGACAAATTTACGGTGAGGATCATGGCTTATGCCTGCAAGATGGCAGAAATTACCGATGCAGGAATCTCGTTGGTTGAAGATCTTTTCAAGCGAAGGGAGCCCATGCCTTCCATGGATGCAATCTACTTCCTCCAGCCACTGAAAGAAAATGTCATAATGCTTCTATCTGACATGTCTGGGAGATGTCCACTGTACAGGAAGGCATACATATTCTTTAGTTCACCGATTCCTAAGGAGCTGGTCTCTTACATAAAGAACGACAGCAGTGTGATACCACGTATTGGTGCACTAAGAGAGATGAATTTGGAGTTCTTTGCAATTGACATGCAGGGATTCACAACTGACCATGACATGGCATTCACTGATTTATATAGTGCTCAGCACAACTCGAAAAAGTTCAATGACACTATAAGCACTATGGCTACTCGCATTGCTACCACATTTGCTTCGTTGAAGGAATTTCCTTGTGTGCGGTATCGTGCCCCAAAGGGCACAGATCCAATGACAACACCAAAATTTGACATGGTTCCAAAATGGTTAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAATCAACAATACCTGAATTTCCCCAGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCTATAGATCAGATAGCACCTGTTATTCATGAATGGACCTATGATGCAATGTGCCATGATCTACTTGAAATGGATGGCCAAAAATACATATATGAGGTGTCGAAAGCGGGATCAGAACCTGAGAGAAAGGAGGCTTTATTGGAGGATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCACATAGCTGATGCTAGTGAGAGGTTGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAAGCAGCTCAACTTCATTCAAGAGATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCAGAAAA CAAATTGAGGTTGCTTATT ATATATGCAATTGTATATCCAGAGAAGTTTGAAGGTGACAAAGGGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATAAATAGTTTAAGATACTTGG TTGGTTCAGATACAAAAAAGGCATCACGGCCTGGCGGCTTCTCTCTCAAATTTGATGCACAAAAGAAAAAAAATGCTGCGAGGACAGAACGGCAGGATGGCGATGAAACCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGAGTTGATTGAGAAACTGAGCAAAGGTGCATTACCTTTGAATGAATACCCATCCATGAGTGAACCCAGTTCCACTGAACAAGGATCTACACAAAGTGCAGCCGCGACTAAACCAGCACAAGCACAACCCATGTCCAGGAGATCGCGGCGGACACCAACCTGGGCTAAGTCTCGAAACTCTGATGATAGTCAATCAAGTGACTCCTCGGTCTTGAGACATGGATCTAATGACTTCAAGAGGCTAGGCAACCGAATTTTTGTCTTCATGATTGGTGGAGCCACTAGATCGGAACTGCGGACGGTGCACAAGCTTACTATGAAACTGAAGCGCGAAATTGTCCTGGGATCTTCTAGCATAGATGACCCTCCACAATTTATTTCGAAGCTGAAGATGCTAACTGCAGGTGGTGCCAATGACGTCTAAACTTCGCACTTAGTTTGCAAATCAACCGATGAAACAAACTTGTCACCTTTTGGTAAGAAACCCATTGCTACGAACAGTTAGAAACGTTGGATGTCATCAATGACTGGACTACTCACAATAATTACACGATTTTTTCATAGTCTAGTATATATACCAAGTGAGAAGAAGTGTCAAATGTACTTAAAACATGTATGTAGACAACATATTTTGCCCACATTATTTATTCTTCTTTCAGATGTAAAACGTAGAACAGTTGCGACAGTTGTTTTGCCCAAATTTGTATATTTATGAACACTACAACAATGACATGGTGACGATTACACTCATGGATCAATCGATTCCGATAATTCGTCGTGAAATCGAGTTATTTATGGCGATGTGGAAAATGGTTATAGAGGTGCGAATGTGCGACTTTATAGGCTAGTTATAGATGTAAGTTCAATGTGTATCGTATCTGTCGAGTTTGTATAGTTTTTTTTTTAACCGAGCTATGAAAT]
[+] EMBL AU162193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCAGAAAA CAAATTGAGGTTGCTTATT ATATATGCAATTGTATATCCAGAGAAGTTTGAAGGTGACAAAGGGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATAAATAGTTTAAGATACTTGGTTTGGTTCAGATNCAAAAAAGGCATCACGGCCTGGCGGCTTCTCTCTCAAATTTGGTGCCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C74642               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACGGTGAACAAGTNGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACAATGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATGCAGCCGCNAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCAGAAAACCAATTTGNGGTTGCCTATTAAAATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_4591#0 AGTGGAGGTAGAGGGGATCAACTCCGGTCGGCGGCGGGATGTCGATGTCGGGGTCGGACT TCGGCGCCCCGTGCGACGACCCCAAGATCTTCCGCAACATCTGCCGGGATCGTATACTCA AGGACTTGCTGCAGCCGGACAAAGATAAGGAGACCAAAAGCTCATGGAAGGTTCTTATCA TGGACAAATTTACGGTGAGGATCATGGCTTATGCCTGCAAGATGGCAGAAATTACCGATG CAGGAATCTCGTTGGTTGAAGATCTTTTCAAGCGAAGGGAGCCCATGCCTTCCATGGATG CAATCTACTTCCTCCAGCCACTGAAAGAAAATGTCATAATGCTTCTATCTGACATGTCTG GGAGATGTCCACTGTACAGGAAGGCATACATATTCTTTAGTTCACCGATTCCTAAGGAGC TGGTCTCTTACATAAAGAACGACAGCAGTGTGATACCACGTATTGGTGCACTAAGAGAGA TGAATTTGGAGTTCTTTGCAATTGACATGCAGGGATTCACAACTGACCATGACATGGCAT TCACTGATTTATATAGTGCTCAGCACAACTCGAAAAAGTTCAATGACACTATAAGCACTA TGGCTACTCGCATTGCTACCACATTTGCTTCGTTGAAGGAATTTCCTTGTGTGCGGTATC GTGCCCCAAAGGGCACAGATCCAATGACAACACCAAAATTTGACATGGTTCCAAAATGGT TAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAATCAACAATACCTGAATTTCCCC AGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCTATAGATCAGATAGCACCTGTTA TTCATGAATGGACCTATGATGCAATGTGCCATGATCTACTTGAAATGGATGGCCAAAAAT ACATATATGAGGTGTCGAAAGCGGGATCAGAACCTGAGAGAAAGGAGGCTTTATTGGAGG ATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCACATAGCTGATGCTAGTGAGAGGT TGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAAGCAGCTCAACTTCATTCAAGAG ATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCACAATACG GTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAACAAGTTTA TCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTTGGAGATG CAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCAGAAAACA AATTGAGGTTGCTTATTATATATGCAATTGTATATCCAGAGAAGTTTGAAGGTGACAAAG GGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATAAATAGTT TAAGATACTTGGTTGGTTCAGATACAAAAAAGGCATCACGGCCTGGCGGCTTCTCTCTCA AATTTGATGCACAAAAGAAAAAAAATGCTGCGAGGACAGAACGGCAGGATGGCGATGAAA CCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGAGTTGATTGAGAAACTGAGCAAAG GTGCATTACCTTTGAATGAATACCCATCCATGAGTGAACCCAGTTCCACTGAACAAGGAT CTACACAAAGTGCAGCCGCGACTAAACCAGCACAAGCACAACCCATGTCCAGGAGATCGC GGCGGACACCAACCTGGGCTAAGTCTCGAAACTCTGATGATAGTCAATCAAGTGACTCCT CGGTCTTGAGACATGGATCTAATGACTTCAAGAGGCTAGGCAACCGAATTTTTGTCTTCA TGATTGGTGGAGCCACTAGATCGGAACTGCGGACGGTGCACAAGCTTACTATGAAACTGA AGCGCGAAATTGTCCTGGGATCTTCTAGCATAGATGACCCTCCACAATTTATTTCGAAGC TGAAGATGCTAACTGCAGGTGGTGCCAATGACGTCTAAACTTCGCACTTAGTTTGCAAAT CAACCGATGAAACAAACTTGTCACCTTTTGGTAAGAAACCCATTGCTACGAACAGTTAGA AACGTTGGATGTCATCAATGACTGGACTACTCACAATAATTACACGATTTTTTCATAGTC TAGTATATATACCAAGTGAGAAGAAGTGTCAAATGTACTTAAAACATGTATGTAGACAAC ATATTTTGCCCACATTATTTATTCTTCTTTCAGATGTAAAACGTAGAACAGTTGCGACAG TTGTTTTGCCCAAATTTGTATATTTATGAACACTACAACAATGACATGGTGACGATTACA CTCATGGATCAATCGATTCCGATAATTCGTCGTGAAATCGAGTTATTTATGGCGATGTGG AAAATGGTTATAGAGGTGCGAATGTGCGACTTTATAGGCTAGTTATAGATGTAAGTTCAA TGTGTATCGTATCTGTCGAGTTTGTATAGTTTTTTTTTTAACCGAGCTATGAAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)