These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4617#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 736 fasta sequence [TCGGCCACAACTCCTCCTCCGCCTTGCCGCGACCATCGCGAAATCGGAAGGCGGCGGCGCGATGGAGCGGAAGCCCGACGAGCCGGAGAAGGCAGCCTCCGGCGCCGGCGCCGGCGACCCTCCTCCACCGCCGTTCTTGGAGGTGAAGTGCAGGAGCTCCGGCGAGGTGCGGCGGTTCGCGTTCGGGACGACGGCGCGGTAC-GCG-CTGCACGCCGTGAACCGCAAGCTCGCCCCCGGCGCACCGGCGGCGCTGCACGTCGAGGCCGTGAAGGACGGCGAGGAGCCCGTCAGCTTCGGCCCCGCCGCGCCGCTCGCCGACTACGGCGACGGATGGAAGCTGCAGACCATCACCGAGCAGGACGCGCCGGGTTACTACCAGACGCCGGCGTCCGACACGAGACG-AGATGACACGAAG-CAGTCGGCGAAGAATCCTCGCGACCAGGAGACGATGGC-AGCGTACATCA-CCAAGATCGTGCTCGCGTTCGTGTTCATCTTCTTGCTGGGCGGGCTGTTCACCTACCTGCTCGAGACGCTCCCCGACATGTTCCAGCCTGCATCTGAACCTCAACCTCTGTAGAATTTACTACTGATTTGCTGATGAAAATGCAGCACAAATTGTATCGTTTATTTTTGAGTGATTTTGGCCTTCTTGATAAGGATAAAGTTTGCTGTTTTGAGCCTCGTACGGCGGTCAGCTGCAGGCCTTCTCTTTGTTTCTGTGCAATGTCAGTCTGCC] [+] EMBL AK062629 [TCGGCCACAACTCCTCCTCCGCCTTGCCGCGACCATCGCGAAATCGGAAGGCGGCGGCGCGATGGAGCGGAAGCCCGACGAGCCGGAGAAGGCAGCCTCCGGCGCCGGCGCCGGCGACCCTCCTCCACCGCCGTTCTTGGAGGTGAAGTGCAGGAGCTCCGGCGAGGTGCGGCGGTTCGCGTTCGGGACGACGGCGCGGTAC GCG CTGCACGCCGTGAACCGCAAGCTCGCCCCCGGCGCACCGGCGGCGCTGCACGTCGAGGCCGTGAAGGACGGCGAGGAGCCCGTCAGCTTCGGCCCCGCCGCGCCGCTCGCCGACTACGGCGACGGATGGAAGCTGCAGACCATCACCGAGCAGGACGCGCCGGGTTACTACCAGACGCCGGCGTCCGACACGAGACG AGATGACACGAAG CAGTCGGCGAAGAATCCTCGCGACCAGGAGACGATGGC AGCGTACATCA CCAAGATCGTGCTCGCGTTCGTGTTCATCTTCTTGCTGGGCGGGCTGTTCACCTACCTGCTCGAGACGCTCCCCGACATGTTCCAGCCTGCATCTGAACCTCAACCTCTGTAGAATTTACTACTGATTTGCTGATGAAAATGCAGCACAAATTGTATCGTTTATTTTTGAGTGATTTTGGCCTTCTTGATAAGGATAAAGTTTGCTGTTTTGAGCCTCGTACGGCGGTCAGCTGCAGGCCTTCTCTTTGTTTCTGTGCAATGTCAGTCTGCC] [+] EMBL CA758486 [ CTCCTCCGCCTTGCCGCGACCATCGCGAAATCGGAAGGCGGCGGCGCGATGGAGCGGAAGCCCGACGAGCCGGAGAAGGCAGCCTCCGGCGCCGGCGCCGGCGACCCTCCTCCACCGCCGTTCTTGGAGGTGAAGTGCAGGAGCTCCGGCGAGGTGCGGCGGTTCGCGTTCGGGACGACGGCGCGGTAC GCG CTGCACGCCGTGAACCGCAAGCTCGCCCCCGGCGCACCGGCGGCGCTGCACGTCGAGGCCGTGAAGGACGGCGAGGAGCCCGTCAGCTTCGGCCCCGCCGCGCCGCTCGCCGACTACGGCGACGGATGGAAGCTGCAGACCATCACCGAGCAGGACGCGCCGGGTTACTACCAGACGCCGGCGTCCGACACGAGACGAAGATGACACCAAGCCAGTC GCGAAGAATCCTCGCGACCAGGAGACGATGGC AGCATACATCACCCAAGA CGTGCTCGCGTTCGTGTTCATCTTCTTGCTGGGCGGGCTGTTCACCTACCTGCTCGAGACGCTCCCCGACATGTTTCAGCCTGCATCTGAA ] [+] EMBL C72638 [ CGCCTTGCCGCGACCATCGCGAAATCGGAAGGCGGCGGCGCGATGGAGCGGAAGCCCGACGAGCCGGAGAAGGCAGCCTCCGGCGCCGGCGCCGACGACCCTCCTCCACCGCCGTTCTTGGAGGTGAAGTGCAGGAGCTCCGGCGAGGTGCGGCGGTTCGCGTTCGGGACGACGGCGCGGTACNTNGACAG CGCCGTGAACCGCAAGCTCGCCCCCGGCGCACCGGCGGCGCTGCACGTCGAGGCCGTGAAGGACGGCGAGGAG CCGTCAGCTTCGGCCCCGCCGCGCCGCTCGCCGACTACGG GACGGATGGAAGCTGCAGACCATCACCGAGCAGGACGCGCCGGGTTACTAACAGACGCCGGCGTTCGACACGAGACG AGATNACACGAAG CAGTNGGCGAAGAATTCTNGCGACCAGGAGACGATTGCAAGC TACAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||