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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4626 cluster # 4626       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4626#0 length = 856 sequences # 3  

consensusID : consensus_4626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 856
fasta sequence
                              [GAATTCCAAAACTGCCATGCCCGTATGGCCACAGCCGGTGCCGCCGTGGACCGGCTTCTACGGCGGCTAGCCGCAGATGCTGGTCGTTTGAAGCTGCCCTCGAGCATAGACGAGGATATGGCGCAGGTACGGCGGACCCTGGCAAGGTTGCAAGATGTGCTGCTAAGCGTGGAGGGGAAATACTTCAAGATGAGCATGGAGGCGCAGGAATGGATGAGGAAGATCAATCAGATTTCCTATGACATCCAAGATCTACTAGATGAATTTGAGGACTGCAGTGAGGCCGGATCTCAAAGGGGCAGTTCCTGGATTGCAAAGGAAATATTGTTGTGTTCCTCAAGTCCTTGTTTCTTTAATAGTAGTAGATTGCAAAGAATAA-GGATAATCAAAAGAAAGTTAGATCTGTCAACAGAAGATTCTGTTGTATTGAGTTTAATGCAGCACAGTCCATCCAACCTTAAGCATTGCAATGAGCCAGTAATTTTTGATGGATATAAAATCCTTGGGAGGGACAATGACAGAGAAAATGTAAAGAATTTGCTCTTCCAAAATGATGCTGATAAATTTTCCATCATTCCCATTGTCGGCCTTGCGGGGATAGGGAAAACAGCTCTAGCAAGGTTAATTTTCCAAGACTATGGAGAAGAGTGGAACTTTGATCAACGTATATGGATCTGTATCGACAGGAAATTAGAGCTTAATAAAATTGCCAATGATATAATTTCACAGGTTAACAAAAAAGAAGAAACTATTTCAGAGTTTGTCCTGAATGATCAAATTCATAACAACTTGCAGTTTATGAAGAATCGCCTCCAAAGAGTTCTTTCTGACAAAAGCAGTTTGATAGTCTTGGATG]

[+] EMBL C72170               [GAATTCCAAAACTGCCATGCCCGTATGGCCACAGCCGGTGCCGCCGTGGACCGGCTTCTACGGCGGCTAGCCGCAGATGCTGGTCGTTTGAAGCTGCCCTCGAGCATAGACGAGGATATGGCGCAGGTACGGCGGACCCTGGCAAGGTTGCAAGATGTGCTGCTAAGCGTGGAGGGGAAATACTTCAAGATGAGCATGGAGGCGCAGGAATGGATGAGGAAGATCAATCAGATTTCCTATGACATCCAAGATCTACTAGATGAATTTGAGGACTGCAGTGAGGCCGGATCTCAAAGGGGCAGTTCCTGGATTGCAAAGGAAATATTGTTGTGTTCCTCAAGTCCTTGTTTCTTTAATAGTAGTAGATTGCAAAGAATAAGGGATAATCAAAAGAAAGTTAGATCTNTCACCAGAAGA TCTGTTGTATTGAGTTTAATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB673560             [               CATGCCCGCCTGGCCACAGCCGGTGCCGCCGTGGACCGGCTTCTACGGCGGCTAGCCGCAGATGCTGGTCGTTTGAAGCTGCCCTCGAGCATAGACGAGGATATGGCGCAGGTACGGCGGACCCTGGCAAGGTTGCAAGATGTGCTGCTAAGCGTGGAGGGGAAATACTTCAAGATGAGCATGGAGGCGCAGGAATGGATGAGGAAGATCAATCAGATTTCCTATGACATCCAAGATCTACTAGATGAATTTGAGGACTGCAGTGAGGCCGGATCTCAAAGGGGCAGTTCCTGGATTGCAAAGGAAATATTGTTGTGTTCCTCAAGTCCTTGTTTCTTTAATAGTAGTAGATTGCAAAGAATAA GGATAATCAAAAGAAAGTTAGATCTGTCAACAGAAGATTCTGTTGTATTGAGTTTAATGCAGCACAGTCCATCCAACCTTAAGCATTGCAATGAGCCAGTAATTTTTGATGGATATAAAATCCTTGGGAGGGACAATGACAGAGAAAATGTAAAGAATTTGCTCTTCCAAAATGATGCTGATAAATTTTCCATCATTCCCATTGTCGGCCTTGCGGGGATAGGGAAAACAGCTCTAGCAAGGTTAATTTTCCAAGACTATGGAGAAGAGTGGAACTTTGATCAACGTATATGGATCTGTATCGACAGGAAATTAGAGCTTAATAAAATTGCCAATGATATAATTTCACAGGTTAACAAAAAAGAAGAAACTATTTCAGAGTTTGTCCTGAATGATCAAATTCATAACAACTTGCAGTTTATGAAGAATCGCCTCCAAAGAGTTCTTTCT                            ]
[+] EMBL CB651292             [                                      TGCCGCCGTGGACCGGCTTCTACGGCGGCTAGCCGCAGATGCTGGTCGTTTGAAGCTGCCCTCGAGCATAGACGAGGATATGGCGCAGGTACGGCGGACCCTGGCAAGGTTGCAAGATGTGCTGCTAAGCGTGGAGGGGAAATACTTCAAGATGAGCATGGAGGCGCAGGAATGGATGAGGAAGATCAATCAGATTTCCTATGACATCCAAGATCTACTAGATGAATTTGAGGACTGCAGTGAGGCCGGATCTCAAAGGGGCAGTTCCTGGATTGCAAAGGAAATATTGTTGTGTTCCTCAAGTCCTTGTTTCTTTAATAGTAGTAGATTGCAAAGAATAA GGATAATCAAAAGAAAGTTAGATCTGTCAACAGAAGATTCTGTTGTATTGAGTTTAATGCAGCACAGTCCATCCAACCTTAAGCATTGCAATGAGCCAGTAATTTTTGATGGATATAAAATCCTTGGGAGGGACAATGACAGAGAAAATGTAAAGAATTTGCTCTTCCAAAATGATGCTGATAAATTTTCCATCATTCCCATTGTCGGCCTTGCGGGGATAGGGAAAACAGCTCTAGCAAGGTTAATTTTCCAAGACTATGGAGAAGAGTGGAACTTTGATCAACGTATATGGATCTGTATCGACAGGAAATTAGAGCTTAATAAAATTGCCAATGATATAATTTCACAGGTTAACAAAAAAGAAGAAACTATTTCAGAGTTTGTCCTGAATGATCAAATTCATAACAACTTGCAGTTTATGAAGAATCGCCTCCAAGAAGTTCTTTCTGACAAAAGCAGTTTGATAGTCTTGGATG]


>consensus_4626#0 GAATTCCAAAACTGCCATGCCCGTATGGCCACAGCCGGTGCCGCCGTGGACCGGCTTCTA CGGCGGCTAGCCGCAGATGCTGGTCGTTTGAAGCTGCCCTCGAGCATAGACGAGGATATG GCGCAGGTACGGCGGACCCTGGCAAGGTTGCAAGATGTGCTGCTAAGCGTGGAGGGGAAA TACTTCAAGATGAGCATGGAGGCGCAGGAATGGATGAGGAAGATCAATCAGATTTCCTAT GACATCCAAGATCTACTAGATGAATTTGAGGACTGCAGTGAGGCCGGATCTCAAAGGGGC AGTTCCTGGATTGCAAAGGAAATATTGTTGTGTTCCTCAAGTCCTTGTTTCTTTAATAGT AGTAGATTGCAAAGAATAAGGATAATCAAAAGAAAGTTAGATCTGTCAACAGAAGATTCT GTTGTATTGAGTTTAATGCAGCACAGTCCATCCAACCTTAAGCATTGCAATGAGCCAGTA ATTTTTGATGGATATAAAATCCTTGGGAGGGACAATGACAGAGAAAATGTAAAGAATTTG CTCTTCCAAAATGATGCTGATAAATTTTCCATCATTCCCATTGTCGGCCTTGCGGGGATA GGGAAAACAGCTCTAGCAAGGTTAATTTTCCAAGACTATGGAGAAGAGTGGAACTTTGAT CAACGTATATGGATCTGTATCGACAGGAAATTAGAGCTTAATAAAATTGCCAATGATATA ATTTCACAGGTTAACAAAAAAGAAGAAACTATTTCAGAGTTTGTCCTGAATGATCAAATT CATAACAACTTGCAGTTTATGAAGAATCGCCTCCAAAGAGTTCTTTCTGACAAAAGCAGT TTGATAGTCTTGGATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)