These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4658#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 839 fasta sequence [CCTTGACTCTGCTGCCTCTTCAGTTCAGATGGAGCTGGACACTGATCCTACCAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTAGAACCCTGCGACGACGATGACGAGTTGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGCGAGGATTGGGAGGCCACCACCCCTCTCGCCGCCGGCAACCCCTTCTTCACCGCCCTCATCGCCAAGTCTCATCTCCACCCCAAGTTCCAGATGTGGATTCCACCTCGGTTCCAGCATCGGCTGGCGGAGCCGGAGGCGCGCACGGCGGCGGTGCTCCACTCCGGCGGCAAGTCG-TGGGCGACGAGCTACTGCGGCCACCTCAAGATGAAGAAGCTGGACGCGGGATGGTCGGAGTTCGCGGTGGACAACCGGCTCCTGGTCGGGGACGCCTGCGTCTTCGAGCTCGTCGCCATGGGCGCCGCCGGAGGTCTGGAGTTCCAGGTGCAGATACTCCGCGGCGGCCTGCCGGCGGAGGTCGTCACCTCCAAGGGCCTCACCTCCGACCAACCCATCCTCATCGTCGACTAGCTTAGCTATCGATCTAGCCACAGTACTAAATCATCAAACTCCACTATTAATTCCACTGTCACTAGCTCGATCGGTAATTAAAGGCAAGGAGCTTTAATTTGGTGTCAAGCAAAAATTTATCCAACCAACTTATGTATGATGTACTGCAGCAGCTGCAATGGCTACTGTAGGGATTGTAGTTTGCTACTATATCTGTTTGCAGGACGGATCCAGGAACAAAAAAATAATTAGGGGAACTCAATTACGCAATTTCTTCAACCTCCAGCCATTTAGGAAAAAAAAA] [+] EMBL AK106920 [CCTTGACTCTGCTGCCTCTTCAGTTCAGATGGAGCTGGACACTGATCCTACCAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTAGAACCCTGCGACGACGATGACGAGTTGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGCGAGGATTGGGAGGCCACCACCCCTCTCGCCGCCGGCAACCCCTTCTTCACCGCCCTCATCGCCAAGTCTCATCTCCACCCCAAGTTCCAGATGTGGATTCCACCTCGGTTCCAGCATCGGCTGGCGGAGCCGGAGGCGCGCACGGCGGCGGTGCTCCACTCCGGCGGCAAGTCG TGGGCGACGAGCTACTGCGGCCACCTCAAGATGAAGAAGCTGGACGCGGGATGGTCGGAGTTCGCGGTGGACAACCGGCTCCTGGTCGGGGACGCCTGCGTCTTCGAGCTCGTCGCCATGGGCGCCGCCGGAGGTCTGGAGTTCCAGGTGCAGATACTCCGCGGCGGCCTGCCGGCGGAGGTCGTCACCTCCAAGGGCCTCACCTCCGACCAACCCATCCTCATCGTCGACTAGCTTAGCTATCGATCTAGCCACAGTACTAAATCATCAAACTCCACTATTAATTCCACTGTCACTAGCTCGATCGGTAATTAAAGGCAAGGAGCTTTAATTTGGTGTCAAGCAAAAATTTATCCAACCAACTTATGTATGATGTACTGCAGCAGCTGCAATGGCTACTGTAGGGATTGTAGTTTGCTACTATATCTGTTTGCAGGACGGATCCAGGAACAAAAAAATAATTAGGGGA ] [+] EMBL C74322 [ CTCTTCAGTTCAGATGGAGCTGGACACTGATCCTACCAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTAGAACCCTGCGACGACGATGACGAGTTGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGCGAGGATTGGGAGGCCACCACCCCTCTCGCCGCCGG AACCCCTTCTTCACCGCCCTCATCGCCAAGTCTCATCTCCACCCCAAGTTCCAGATGTGGATTCCACCTCGGTTCCAGCATCGGCTGGCGGA CGGAAGGC NGCACGGCGGCGGTGCTCCAATCCGGCGGCAAGTCGTTGGGCGA GAACTAATTCGGCCACCTCAAGATGAAGANCTTGGACGCGGGATTGTCGAAGTTCNCGGTTGAAAACCG ] [+] EMBL AU082328 [ CCCATCCTCATCGTCGACTAGCTTAGCTATCGATCTAGCCACAGTACTAAATCATCAAACTCCACTATTAATTCCACTGTCACTAGCTCGATCGGTAATTAAAGGCAAGGAGCTTTAATTTGGTGTCAAGCAAAAATTTATCCAACCAACTTATGTATGATGTACTGCAGCAGCTGCAATGGCTACTGTAGGGATTGTAGTTTGCTACTATATCTGTTTGCAGGACGGATCCAGGAACAAAAAAATAATTAGGGGGACTCAATTACGCAATTTCTTCAACCTCCAGCCATTTAGGAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||