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Oryza sativa
cluster # 4663 cluster # 4663       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4663#0 length = 2560 sequences # 3  

consensusID : consensus_4663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2560
fasta sequence
                              [ACGCGCCAACCGCGTCGCTCGCGAGCAGCGCAGCAGCCAGCCATGGCGGTGGCGGTGGCGGCGTCGCTCTCGACCCCGGCGCCATCGCCGGCGGCCGGGGGGAGGGGCCGGAGGAGGGTGAACGTGGCGGTGGCGTCCCTGCGGCGGGCGGCGGCGGGAGGTGGCTCGAGCTGGCGGAGCGAGCGGCGGCTCATGTCGGAGCTGGAGCGCACGGTGACGCCCGGCGCGGCGGAGCGCGTCATCCGCAGCTACGTCGCCTCCAAGTCGGAGCGCGCCGCCCTCGCCGCGCTCTCCCGCCTGCTCATGGACTCCGACCCCTTCGCCATCCCGTTCTACGAGGTGGTCACCCAGGCGCGGTGGTTCAAGTGGAGCTCCATCCACGCCGCCGCCGTCGCCGCGCTGCTCGAGAGCAATGGCAGCGCGGAGGAATCAAGATCCCTCATCTCCGACTCCATCTCGCGCCTCCACTCCACCTCCTCCTCCTCCGAGGAGGTGTCCCTCTTCTACTGCGACCTCATGGCGGCCTTCTCCTCCCGCGGGATGCGAGACCGGGCGATGGATTTCTACTCCCAGCTGCGAGCCTCGCCGCCGCTGTCCGGGAAGAAGACCTACACGGCGATGATAAAATCTCTGTGCCTGATGGGCCTCGCCGGCGAGGCGGAGGCGGCGCTGAGGGAGATGGCGTCTCGGGGGCACCAGCCGGAGGCGTTCCAGTTCGGATTGGTGGCGAAGTGCTACGGCAAGGCGGGATCCATGGCCGAGATGGAGAGGGTGATCTCGTCCATGTCCGACGCCGGCATCCGCCTCGGCACCGGCGCGGCGAACATCGTGCTCTCGTGCTACACCTCCTGCCGTGACCATTCCAGGATGCTGGCATGGCTGAGGAGGATGAGGAAGCTGCGGATTGCGCCGACGACGAAGGCCTTCAACTTTGTGCTCAACTCATGCCCAACAGTAGCTTCGATGGCTCAAGAATTGGGGGAATCACTGCCATTGTCAACGGCTGAGTTGGTCAAGAAGCTCAGGTCTGCATCTCAATGGCCAGCAGAAGCTGAGCTGGTGCAGGAGCTCCTGACATCCTCTTCGGTGCTCGACAAGGCGATGGATTGGTCGGAGTCGGAGGTGAAGCTGAACCTCCATGGATTCAGCACAATTGCAGCCTATGTTTTGATTTTGCAGTGGGTGGATGCGATGAAGGCGCGCCGCGCATTGCCATTGGAGGTGTCAGTGGTGTGTGGCATTGGCAAGCACAGCGATGTCAGAGGTGAGCCCAAGGTGAGGGAGCTGGCTCAGGAGGTTCTGAGCAGGATGGGGAGCCCCCTGAGGCTGTCCATGAGGAACAAAGGCCGGCTTGTCGCCAAGCGCGACAGGGTGAAGCAATGGCTGGCCACTGACTGGAGCTCTCCGGTGGATGAGGAGAGCACAGATCAATCACCTAATGGGGACAACCAGCAACCATTTTTACTTACACTCATGAGAAAACTAGGACAGGTTCTGTCACCATTTCTGCAGTTCTCAAAGGGTAAAGCATAAGAGAAGCACCTCTCTTATGTAGGTTTTTCAGATAGTTTGGTCTTTGGATAGTTCAGCATCTTTGCCATGCTGTAGATTGATACAAGCATTGTCTTGGTCTAGTGAATCCTAAGTTCTAGTTCTGATGCCGAAATGCTATGCGTCGGCCAGCTGCTTGAAGGTTATGGGACTGACAAACCGTGCTGCCCCGTCATAGAAGGCAAGGCCTACAATCTTGGAGGTGGCCTGGGTAGGGTGGAGGAGATCCCAGAAGAGATATCTGCTACGGTCAGCGCAGCAGCTGGAGCTGGGGGTACAGGCTTCCTCGGCGTTGAACTTGCCACCACCACCACAGCATGCACTCTTCACCTCTACAAACCCTGAAATCAATCAGCAAGTCTGTGAGATCTCAGATATAGCTGAAAAGTAGACGGTTACAATTCAATTCATGCTAAGTAGAACTGTGACAATGTTTGAGGTGTGAGTTCCAGGTCATATTACTCTTTGCTTAAACTGAGGTAACTTACCAGCAGCTTGTGGATTTTCAATTAGGCTGGAGATAAGTTCATAGGAGCTGGCAATGGAGTACTTCATTCCCTGCATTTCGGAGCTGAGGTCACGGAACAGGTCCCGGATTTCGCCGTTCAGTCTCTTGGCCAACTGGTTTAGCGGTTCGAAGCACTCTCCGGTCGGGTTCTGACTTCTCAAATATGGGCAGCACCCGAGTAATGGCACATTGATCACTGCAAACTTCCTTGCTCCTAAATTGTATAATGTCTACAAGAATACTTCAACAGTTACTAACTTAATAAAACATAATTTGTTTGCCAGCATGCCAAGCATTTCGAGTTTGAGTTGCATTTGGTGGACAATTGAAATGAGGGAGTATGTTCTGTTCAAAATTTCNNNTATATTGATTCNNNCTNAAGTAAAATGTAACATGAGTTGCATCAATTTCTTTCTTTTACATNNNNGNANGCNNNTATTAAGNNGCATCAATTGCTACTGGNNNANTNNNANNNNGANGNTTGAANNANNNNNNNNNNNN]

[+] EMBL AK067383             [ACGCGCCAACCGCGTCGCTCGCGAGCAGCGCAGCAGCCAGCCATGGCGGTGGCGGTGGCGGCGTCGCTCTCGACCCCGGCGCCATCGCCGGCGGCCGGGGGGAGGGGCCGGAGGAGGGTGAACGTGGCGGTGGCGTCCCTGCGGCGGGCGGCGGCGGGAGGTGGCTCGAGCTGGCGGAGCGAGCGGCGGCTCATGTCGGAGCTGGAGCGCACGGTGACGCCCGGCGCGGCGGAGCGCGTCATCCGCAGCTACGTCGCCTCCAAGTCGGAGCGCGCCGCCCTCGCCGCGCTCTCCCGCCTGCTCATGGACTCCGACCCCTTCGCCATCCCGTTCTACGAGGTGGTCACCCAGGCGCGGTGGTTCAAGTGGAGCTCCATCCACGCCGCCGCCGTCGCCGCGCTGCTCGAGAGCAATGGCAGCGCGGAGGAATCAAGATCCCTCATCTCCGACTCCATCTCGCGCCTCCACTCCACCTCCTCCTCCTCCGAGGAGGTGTCCCTCTTCTACTGCGACCTCATGGCGGCCTTCTCCTCCCGCGGGATGCGAGACCGGGCGATGGATTTCTACTCCCAGCTGCGAGCCTCGCCGCCGCTGTCCGGGAAGAAGACCTACACGGCGATGATAAAATCTCTGTGCCTGATGGGCCTCGCCGGCGAGGCGGAGGCGGCGCTGAGGGAGATGGCGTCTCGGGGGCACCAGCCGGAGGCGTTCCAGTTCGGATTGGTGGCGAAGTGCTACGGCAAGGCGGGATCCATGGCCGAGATGGAGAGGGTGATCTCGTCCATGTCCGACGCCGGCATCCGCCTCGGCACCGGCGCGGCGAACATCGTGCTCTCGTGCTACACCTCCTGCCGTGACCATTCCAGGATGCTGGCATGGCTGAGGAGGATGAGGAAGCTGCGGATTGCGCCGACGACGAAGGCCTTCAACTTTGTGCTCAACTCATGCCCAACAGTAGCTTCGATGGCTCAAGAATTGGGGGAATCACTGCCATTGTCAACGGCTGAGTTGGTCAAGAAGCTCAGGTCTGCATCTCAATGGCCAGCAGAAGCTGAGCTGGTGCAGGAGCTCCTGACATCCTCTTCGGTGCTCGACAAGGCGATGGATTGGTCGGAGTCGGAGGTGAAGCTGAACCTCCATGGATTCAGCACAATTGCAGCCTATGTTTTGATTTTGCAGTGGGTGGATGCGATGAAGGCGCGCCGCGCATTGCCATTGGAGGTGTCAGTGGTGTGTGGCATTGGCAAGCACAGCGATGTCAGAGGTGAGCCCAAGGTGAGGGAGCTGGCTCAGGAGGTTCTGAGCAGGATGGGGAGCCCCCTGAGGCTGTCCATGAGGAACAAAGGCCGGCTTGTCGCCAAGCGCGACAGGGTGAAGCAATGGCTGGCCACTGACTGGAGCTCTCCGGTGGATGAGGAGAGCACAGATCAATCACCTAATGGGGACAACCAGCAACCATTTTTACTTACACTCATGAGAAAACTAGGACAGGTTCTGTCACCATTTCTGCAGTTCTCAAAGGGTAAAGCATAAGAGAAGCACCTCTCTTATGTAGGTTTTTCAGATAGTTTGGTCTTTGGATAGTTCAGCATCTTTGCCATGCTGTAGATTGATACAAGCATTGTCTTGGTCTAGTGAATCCTAAGTTCTAGTTCTGATGCCGAAATGCTATGCGTCGGCCAGCTGCTTGAAGGTTATGGGACTGACAAACCGTGCTGCCCCGTCATAGAAGGCAAGGCCTACAATCTTGGAGGTGGCCTGGGTAGGGTGGAGGAGATCCCAGAAGAGATATCTGCTACGGTCAGCGCAGCAGCTGGAGCTGGGGGTACAGGCTTCCTCGGCGTTGAACTTGCCACCACCACCACAGCATGCACTCTTCACCTCTACAAACCCTGAAATCAATCAGCAAGTCTGTGAGATCTCAGATATAGCTGAAAAGTAGACGGTTACAATTCAATTCATGCTAAGTAGAACTGTGACAATGTTTGAGGTGTGAGTTCCAGGTCATATTACTCTTTGCTTAAACTGAGGTAACTTACCAGCAGCTTGTGGATTTTCAATTAGGCTGGAGATAAGTTCATAGGAGCTGGCAATGGAGTACTTCATTCCCTGCATTTCGGAGCTGAGGTCACGGAACAGGTCCCGGATTTCGCCGTTCAGTCTCTTGGCCAACTGGTTTAGCGGTTCGAAGCACTCTCCGGTCGGGTTCTGACTTCTCAAATATGGGCAGCACCCGAGTAATGGCACATTGATCACTGCAAACTTCCTTGCTCCTAAATTGTATAATGTCTACAAGAATACTTCAACAGTTACTAACTTAATAAAACATAATTT                                                                                                                                                                                                                                  ]
[+] EMBL AK101590             [                  TCGCGAGCAGCGCAGCAGCCAGCCATGGCGGTGGCGGTGGCGGCGTCGCTCTCGACCCCGGCGCCATCGCCGGCGGCCGGGGGGAGGGGCCGAAGGAGGGTGAACGTGGCGGTGGCGTCCCTGCGGCGGGCGGCGGCGGGAGGTGGCTCGAGCTGGCGGAGCGAGCGGCGGCTCATGTCGGAGCTGGAGCGCACGGTGACGCCCGGCGCGGCGGAGCGCGTCATCCGCAGCTACGTCGCCTCCAAGTCGGAGCGCGCCGCCCTCGCCGCGCTCTCCCGCCTGCTCATGGACTCCGACCCCTTCGCCATCCCGTTCTACGAGGTGGTCACCCAGGCGCGGTGGTTCAAGTGGAGCTCCATCCACGCCGCCGCCGTCGCCGCGCTGCTCGAGAGCAATGGCAGCGCGGAGGAATCAAGATCCCTCATCTCCGACTCCATCTCGCGCCTCCACTCCACCTCCTCCTCCTCCGAGGAGGTGTCCCTCTTCTACTGCGACCTCATGGCGGCCTTCTCCTCCCGCGGGATGCGAGACCGGGCGATGGATTTCTACTCCCAGCTGCGAGCCTCGCCGCCGCTGTCCGGGAAGAAGACCTACACGGCGATGATAAAATCTCTGTGCCTGATGGGCCTCGCCGGCGAGGCGGAGGCGGCGCTGAGGGAGATGGCGTCTCGGGGGCACCAGCCGGAGGCGTTCCAGTTCGGATTGGTGGCGAAGTGCTACGGCAAGGCGGGATCCATGGCCGAGATGGAGAGGGTGATCTCGTCCATGTCCGACGCCGGCATCCGCCTCGGCACCGGCGCGGCGAACATCGTGCTCTCGTGCTACACCTCCTGCCGTGACCATTCCAGGATGCTGGCATGGCTGAGGAGGATGAGGAAGCTGCGGATTGCGCCGACGACGAAGGCCTTCAACTTTGTGCTCAACTCATGCCCAACAGTAGCTTCGATGGCTCAAGAATTGGGGGAATCACTGCCATTGTCAACGGCTGAGTTGGTCAAGAAGCTCAGGTCTGCATCTCAATGGCCAGCAGAAGCTGAGCTGGTGCAGGAGCTCCTGACATCCTCTTCGGTGCTCGACAAGGCGATGGATTGGTCGGAGTCGGAGGTGAAGCTGAACCTCCATGGATTCAGCACAATTGCAGCCTATGTTTTGATTTTGCAGTGGGTGGATGCGATGAAGGCGCGCCGCGCATTGCCATTGGAGGTGTCAGTGGTGTGTGGCATTGGCAAGCACAGCGATGTCAGAGGTGAGCCCAAGGTGAGGGAGCTGGCTCAGGAGGTTCTGAGCAGGATGGGGAGCCCCCTGAGGCTGTCCATGAGGAACAAAGGCCGGCTTGTCGCCAAGCGCGACAGGGTGAAGCAATGGCTGGCCACTGACTGGAGCTCTCCGGTGGATGAGGAGAGCACAGATCAATCACCTAATGGGGACAACCAGCAACCATTTTTACTTACACTCATGAGAAAACTAGGACAGGTTCTGTCACCATTTCTGCAGTTCTCAAAGGGTAAAGCATAAGAGAAGCACCTCTCTTATGTAGGTTTTTCAGATAGTTTGGTCTTTGGATAGTTCAGCATCTTTGCCATGCTGTAGATTGATACAAGCTTTGTCTTGGTCTAGTGAATCCTAAGTTCTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF196725             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCACATTGATCANTGCAAACTTCCTTGCTCCTAAATTGTATAATGTCTACAAGAATACTTCAACAGTTACTAACTTAATAAAACATAATTTGTTTGCCAGCATGCCAAGCATTTCGAGTTTGAGTTGCATTTGGTGGACAATTGAAATGAGGGAGTATGTTCTGTTCAAAATTTCNNNTATATTGATTCNNNCTNAAGTAAAATGTAACATGAGTTGCATCAATTTCTTTCTTTTACATNNNNGNANGCNNNTATTAAGNNGCATCAATTGCTACTGGNNNANTNNNANNNNGANGNTTGAANNANNNNNNNNNNNN]


>consensus_4663#0 ACGCGCCAACCGCGTCGCTCGCGAGCAGCGCAGCAGCCAGCCATGGCGGTGGCGGTGGCG GCGTCGCTCTCGACCCCGGCGCCATCGCCGGCGGCCGGGGGGAGGGGCCGGAGGAGGGTG AACGTGGCGGTGGCGTCCCTGCGGCGGGCGGCGGCGGGAGGTGGCTCGAGCTGGCGGAGC GAGCGGCGGCTCATGTCGGAGCTGGAGCGCACGGTGACGCCCGGCGCGGCGGAGCGCGTC ATCCGCAGCTACGTCGCCTCCAAGTCGGAGCGCGCCGCCCTCGCCGCGCTCTCCCGCCTG CTCATGGACTCCGACCCCTTCGCCATCCCGTTCTACGAGGTGGTCACCCAGGCGCGGTGG TTCAAGTGGAGCTCCATCCACGCCGCCGCCGTCGCCGCGCTGCTCGAGAGCAATGGCAGC GCGGAGGAATCAAGATCCCTCATCTCCGACTCCATCTCGCGCCTCCACTCCACCTCCTCC TCCTCCGAGGAGGTGTCCCTCTTCTACTGCGACCTCATGGCGGCCTTCTCCTCCCGCGGG ATGCGAGACCGGGCGATGGATTTCTACTCCCAGCTGCGAGCCTCGCCGCCGCTGTCCGGG AAGAAGACCTACACGGCGATGATAAAATCTCTGTGCCTGATGGGCCTCGCCGGCGAGGCG GAGGCGGCGCTGAGGGAGATGGCGTCTCGGGGGCACCAGCCGGAGGCGTTCCAGTTCGGA TTGGTGGCGAAGTGCTACGGCAAGGCGGGATCCATGGCCGAGATGGAGAGGGTGATCTCG TCCATGTCCGACGCCGGCATCCGCCTCGGCACCGGCGCGGCGAACATCGTGCTCTCGTGC TACACCTCCTGCCGTGACCATTCCAGGATGCTGGCATGGCTGAGGAGGATGAGGAAGCTG CGGATTGCGCCGACGACGAAGGCCTTCAACTTTGTGCTCAACTCATGCCCAACAGTAGCT TCGATGGCTCAAGAATTGGGGGAATCACTGCCATTGTCAACGGCTGAGTTGGTCAAGAAG CTCAGGTCTGCATCTCAATGGCCAGCAGAAGCTGAGCTGGTGCAGGAGCTCCTGACATCC TCTTCGGTGCTCGACAAGGCGATGGATTGGTCGGAGTCGGAGGTGAAGCTGAACCTCCAT GGATTCAGCACAATTGCAGCCTATGTTTTGATTTTGCAGTGGGTGGATGCGATGAAGGCG CGCCGCGCATTGCCATTGGAGGTGTCAGTGGTGTGTGGCATTGGCAAGCACAGCGATGTC AGAGGTGAGCCCAAGGTGAGGGAGCTGGCTCAGGAGGTTCTGAGCAGGATGGGGAGCCCC CTGAGGCTGTCCATGAGGAACAAAGGCCGGCTTGTCGCCAAGCGCGACAGGGTGAAGCAA TGGCTGGCCACTGACTGGAGCTCTCCGGTGGATGAGGAGAGCACAGATCAATCACCTAAT GGGGACAACCAGCAACCATTTTTACTTACACTCATGAGAAAACTAGGACAGGTTCTGTCA CCATTTCTGCAGTTCTCAAAGGGTAAAGCATAAGAGAAGCACCTCTCTTATGTAGGTTTT TCAGATAGTTTGGTCTTTGGATAGTTCAGCATCTTTGCCATGCTGTAGATTGATACAAGC ATTGTCTTGGTCTAGTGAATCCTAAGTTCTAGTTCTGATGCCGAAATGCTATGCGTCGGC CAGCTGCTTGAAGGTTATGGGACTGACAAACCGTGCTGCCCCGTCATAGAAGGCAAGGCC TACAATCTTGGAGGTGGCCTGGGTAGGGTGGAGGAGATCCCAGAAGAGATATCTGCTACG GTCAGCGCAGCAGCTGGAGCTGGGGGTACAGGCTTCCTCGGCGTTGAACTTGCCACCACC ACCACAGCATGCACTCTTCACCTCTACAAACCCTGAAATCAATCAGCAAGTCTGTGAGAT CTCAGATATAGCTGAAAAGTAGACGGTTACAATTCAATTCATGCTAAGTAGAACTGTGAC AATGTTTGAGGTGTGAGTTCCAGGTCATATTACTCTTTGCTTAAACTGAGGTAACTTACC AGCAGCTTGTGGATTTTCAATTAGGCTGGAGATAAGTTCATAGGAGCTGGCAATGGAGTA CTTCATTCCCTGCATTTCGGAGCTGAGGTCACGGAACAGGTCCCGGATTTCGCCGTTCAG TCTCTTGGCCAACTGGTTTAGCGGTTCGAAGCACTCTCCGGTCGGGTTCTGACTTCTCAA ATATGGGCAGCACCCGAGTAATGGCACATTGATCACTGCAAACTTCCTTGCTCCTAAATT GTATAATGTCTACAAGAATACTTCAACAGTTACTAACTTAATAAAACATAATTTGTTTGC CAGCATGCCAAGCATTTCGAGTTTGAGTTGCATTTGGTGGACAATTGAAATGAGGGAGTA TGTTCTGTTCAAAATTTCNNNTATATTGATTCNNNCTNAAGTAAAATGTAACATGAGTTG CATCAATTTCTTTCTTTTACATNNNNGNANGCNNNTATTAAGNNGCATCAATTGCTACTG GNNNANTNNNANNNNGANGNTTGAANNANNNNNNNNNNNN



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)