These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4744#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 798 fasta sequence [CGCTTCAAAAGCCTTTTTAGCCACCTCGTAGCCTCTCACAAGTACTACATTTTCATCTCGAAAGAAAGTGAAATCATCAAGAACTTGGTGAGAATCGATCAAAGAGCAGTGCCAGCTGCAGCTGCAGCA-G-AGGATCGGAGGAGGAAGGGGGAGAAGAGGAGATCGGGGAGTGGAGAGACGAAAAGCAGCAGCAGTAGTTGCAGCAGCAGCAGCATGGAGGAGAGAGTGAAGATTGGAGGAGACGGCGAAGAAGAAGAAGAAGAAGAAGCAGAGGAGGAGGAGGCGCCATTGGAGGTGGTGAGGGCAGCGAAAAGGAGATTTGGGGTGGTGGTGGTGGTGGGCCCACCCCCCAGCTGAGGAGGAGCAGGAGAAGGAAGAAGAGCGAGGAGGAGAGGATCCCCTCTCACGTCAAAGGAGGGGGAAAGCAGCATAAAGGCAGCAGCAGCTACTGGAGGA-GAAGAGGAAGCAAGAGAGC-TCAGCTTCACTACTTCACT-GGCTCGGCCAACCAAAGCAGCAGTCGAAAGCGAGAAAAAAAGCTTAAGAAAGAAAGAAAGCTAGCTTCAGTGAGAGTGAGAATGTGGGGGGAGATAGAGAGAGAGAGAGAGAGAGAGAGTCTAGTGTGTCTTGAGAGAGATATATAACACCAACAACTCCCAGCTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATCTGGTTCTTGTACCACCACCACCACTGCCCCCTTTGCATTGTCCCTCCCTGGCCACTTCTTTCTCCTTCTCCATTTTGTGCCTAGCGTACA] [+] EMBL AK102637 [CGCTTCAAAAGCCTTTTTAGCCACCTCGTAGCCTCTCACAAGTACTACATTTTCATCTCGAAAGAAAGTGAAATCATCAAGAACTTGGTGAGAATCGATCAAAGAGCAGTGCCAGCTGCAGCTGCAGCA G AGGATCGGAGGAGGAAGGGGGAGAAGAGGAGATCGGGGAGTGGAGAGACGAAAAGCAGCAGCAGTAGTTGCAGCAGCAGCAGCATGGAGGAGAGAGTGAAGATTGGAGGAGACGGCGAAGAAGAAGAAGAAGAAGAAGCAGAGGAGGAGGAGGCGCCATTGGAGGTGGTGAGGGCAGCGAAAAGGAGATTTGGGGTGGTGGTGGTGGTGGGCCCACCCCCCAGCTGAGGAGGAGCAGGAGAAGGAAGAAGAGCGAGGAGGAGAGGATCCCCTCTCACGTCAAAGGAGGGGGAAAGCAGCATAAAGGCAGCAGCAGCTACTGGAGGA GAAGAGGAAGCAAGAGAGC TCAGCTTCACTACTTCACT GGCTCGGCCAACCAAAGCAGCAGTCGAAAGCGAGAAAAAAAGCTTAAGAAAGAAAGAAAGCTAGCTTCAGTGAGAGTGAGAATGTGGGGGGAGATAGAGAGAGAGAGAGAGAGAGAGAGTCTAGTGTGTCTTGAGAGAGATATATAACACCAACAACTCCCAGCTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATCTGGTTCTTGTACCACCACCACCACTGCCCCCTTTGCATTGTCCCTCCCTGGCCACTTCTTTCTCCTTCTCCATTTTGTGCCTAGCGTACA] [+] EMBL OS1321666 [ CCTTTTTAGCCACCTCGTAGCCTCTCACAAGTACTACATTTTCATCTCGAAAGAAAGTGAAATCATCAAGAACTTGGTGAGAATCGATCAAAGAGCAGTGCCAGCTGCAGCTGCA NA GAAGGATCGCAGGAGGAAGGGGGAGAAGAGGAGATCGGGGAGTGGAGAGACGAAAAGCAGCAGCAGTAGTTGCAGCAGCAGCAGCATGGAGGAGAGAGTGAAGATTGGAGGAGACGGCGAAGAAGAAGAAGAAGAAGAAGCAGAGGAGGAGGAGGCGCCATTGGAGGTGGTGAGGNCAGCGAA ] [+] EMBL C26462 [ AAATCATCAAGAACTTGGTGAGAATCGATCAAAGAGCAGTGCCAGCTGCAGCTGCAGCANG AGGATCGGAGGAGGAAGGGGGAGAAGAGGAGATCGGGGAGTGGAGAGACGAAAAGCAGCAGCAGTAGTTGCAGCAGCAGCAGCATGGAGGAGAGAGTNAAGATTGGAGGAGACGGCGAAGAAGAAGAAGAAGAAGAAGCAGAGGAGGAGGAGGCGCCATTGGAGGTGGTGAGGGCAGCGAAAAGGAGATTTGGGGTGGTGGTGGTGGTGGGCCCACCCCCCAGCTGAGGAGGAGCAGGAGAAGGAAGAAGAGCGAAGAGGAGAGGATCTCCTCTCACGTCAAAGGAGGGGG AAGCAGCATAAAGGCAGCAGCAGCTACTNGAGGAGGAAGAGGAAGCAAGATAGCTTCANTTTCACTACTTCACTNGGTTCGGCCAACCc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||