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Oryza sativa
cluster # 4820 cluster # 4820       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4820#0 length = 997 sequences # 3  

consensusID : consensus_4820#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 997
fasta sequence
                              [ACCTGGCCAAGTCGATCGAGGCCAAGTGGTTCAGCCTGTCGCGGGCGCTGACGGCGGACGAGGCCGCGGCGGCGGAGGCGACGAAGCTCAAGTCGTCGTTCGCGAGCAAGATCCACCTGCGGCTGAGCCTGGAGACGGCGTACCACGTGTTGGACGAGTCGACGCACTACAGCAGCGACCTGCAGCCGGCGGCGAAGAAGCTGAGGAAGAGCCCGATCGGGATCCTGGAGCTGGGCATCCTCGGGGCGCGGAACCTGGCGGGCGGGAAGAGCCCCTACTGCGTGGCCAAGTACGGGGCGAAGTGGGTGCGGACGCGGACGCTGGTGGGGACGGCGGCGCCCCGGTGGAACGAGCAGTACACGTGGGAGGTGTTCGACCTGTGCACGGTGGTGACGGTGGCGGTGTTCGACAACTGCCACCTGACGGGGGGCGGGGACGCCAAGGACCAGCGGATCGGCAAGGTGCGGGTGCGGCTGTCGACGCTGGAGACGGAGCGCGTGTACACCCACTTCTACCCGCTGATGACGCTGACGCCGGGGGGCCTGAAGAAGACCGGGGAGCTCCACCTGGCGGTGCGGTTCACGTGCACGGCGTGGGCCAACATGCTGGCCATGTACGGGAAGCCGCTGC--TGCCC-AAGATGCAC--TACACCCACCCCATC-TCGGTGCTGCAGATGGACTACCTGCGGTTCCAGGCGATGCAGATGGTGGCGGC-GC-GGCTGGGTCGCGC-GGAGCCCCCGCTGCACCGTGAGGTGGTGGAGTACATGCTGGACGTGGACTCCCACATGTTCAGCCTGCGTCGGAGCAAGGCCAACTTCAAGCGGATGACGTCGCTCTTCTCCGGGCGGTGCGGTGGCGCGGTGGATGGATGGGATCTGCAAG-TGGAAGAACCCGGTGACCACC-ATCCTGGTGCACGTGCTGTTCCTCATCCTGGTGTGCTACCCGGAGCTGATCCTCCCCACCGTCTTCCTCTACCTGTTCGTCATCGGGGTGTGGAACT]

[+] EMBL CB651731             [ACCTGGCCAAGTCGATCGAGGCCAAGTGGTTCAGCCTGTCGCGGGCGCTGACGGCGGACGAGGCCGCGGCGGCGGAGGCGACGAAGCTCAAGTCGTCGTTCGCGAGCAAGATCCACCTGCGGCTGAGCCTGGAGACGGCGTACCACGTGTTGGACGAGTCGACGCACTACAGCAGCGACCTGCAGCCGGCGGCGAAGAAGCTGAGGAAGAGCCCGATCGGGATCCTGGAGCTGGGCATCCTCGGGGCGCGGAACCTGGCGGGCGGGAAGAGCCCCTACTGCGTGGCCAAGTACGGGGCGAAGTGGGTGCGGACGCGGACGCTGGTGGGGACGGCGGCGCCCCGGTGGAACGAGCAGTACACGTGGGAGGTGTTCGACCTGTGCACGGTGGTGACGGTGGCGGTGTTCGACAACTGCCACCTGACGGGGGGCGGGGACGCCAAGGACCAGCGGATCGGCAAGGTGCGGGTGCGGCTGTCGACGCTGGAGACGGAGCGCGTGTACACCCACTTCTACCCGCTGATGACGCTGACGCCGGGGGGCCTGAAGAAGACCGGGGAGCTCCACCTGGCGGTGCGGTTCACGTGCACGGCGTGGGCCAACATGCTGGCCATGTACGGGAAGCCGCTGC  TGCCC AAGATGCAC  TACACCCACCCCATC TCGGTGCTGCAGATGGACTACCTGCGGTTCCAGGCGATGCAGATGGTGGCGGC GC GGCTGGGTCGCGC GGAGCCCCCGCTGCACCGTGAGGTGGTGGAGTACATGCTGGACGTGGACTCCCACATGTTC                                                                                                                                                                                                                   ]
[+] EMBL BI809558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             acCCGCTGCTTTGCCCAAAGATGCACTATACACCCACCCCATCTTCGGTGCTGCAGATGGACTACCTGCGGTTCCAGGCGATGCAGATGGTGGCGGCAGCAGGCTGGGTCGCGCAGGAGCCCCCGCTGCACCGTGAGGTGGTGGAGTACATGCTGGACGTGGACTCCCACATGTTCAGCCTGCGTCGGAGCAAGGCCAACTTCAAGCGGATGACGTCGCTCTTCTCCGGGCGGTGCGGTGGCGCGGTGGATGGATGGGATCTGCAAG TGGAAGAACCCGGTGACCACC ATCCTGGTGCACGTGCTGTTCCTCATCCTGGTGTGCTACCCGGAGCTGATCCTCCCCACCGTCTTCCTCTACCTGTTCGTCATCGGGGTGTGGAAC ]
[-] EMBL BU667195             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGGTGGATGGATGGGATCTGCAAGTTGGAAGAACCCGGTGACCACCAATCCTGGTGCACGTGCTGTTCCTCATCCTGGTGTGCTACCCGGAGCTGATCCTCCCCACCGTCTTCCTCTACCTGTTCGTCATCGGGGTGTGGAACT]


>consensus_4820#0 ACCTGGCCAAGTCGATCGAGGCCAAGTGGTTCAGCCTGTCGCGGGCGCTGACGGCGGACG AGGCCGCGGCGGCGGAGGCGACGAAGCTCAAGTCGTCGTTCGCGAGCAAGATCCACCTGC GGCTGAGCCTGGAGACGGCGTACCACGTGTTGGACGAGTCGACGCACTACAGCAGCGACC TGCAGCCGGCGGCGAAGAAGCTGAGGAAGAGCCCGATCGGGATCCTGGAGCTGGGCATCC TCGGGGCGCGGAACCTGGCGGGCGGGAAGAGCCCCTACTGCGTGGCCAAGTACGGGGCGA AGTGGGTGCGGACGCGGACGCTGGTGGGGACGGCGGCGCCCCGGTGGAACGAGCAGTACA CGTGGGAGGTGTTCGACCTGTGCACGGTGGTGACGGTGGCGGTGTTCGACAACTGCCACC TGACGGGGGGCGGGGACGCCAAGGACCAGCGGATCGGCAAGGTGCGGGTGCGGCTGTCGA CGCTGGAGACGGAGCGCGTGTACACCCACTTCTACCCGCTGATGACGCTGACGCCGGGGG GCCTGAAGAAGACCGGGGAGCTCCACCTGGCGGTGCGGTTCACGTGCACGGCGTGGGCCA ACATGCTGGCCATGTACGGGAAGCCGCTGCTGCCCAAGATGCACTACACCCACCCCATCT CGGTGCTGCAGATGGACTACCTGCGGTTCCAGGCGATGCAGATGGTGGCGGCGCGGCTGG GTCGCGCGGAGCCCCCGCTGCACCGTGAGGTGGTGGAGTACATGCTGGACGTGGACTCCC ACATGTTCAGCCTGCGTCGGAGCAAGGCCAACTTCAAGCGGATGACGTCGCTCTTCTCCG GGCGGTGCGGTGGCGCGGTGGATGGATGGGATCTGCAAGTGGAAGAACCCGGTGACCACC ATCCTGGTGCACGTGCTGTTCCTCATCCTGGTGTGCTACCCGGAGCTGATCCTCCCCACC GTCTTCCTCTACCTGTTCGTCATCGGGGTGTGGAACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)