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Oryza sativa
cluster # 4827 cluster # 4827       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4827#0 length = 2351 sequences # 3  

consensusID : consensus_4827#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2351
fasta sequence
                              [ACTATCATTTCCCCAATCTCCACCTCACCTGAGCCGTCGCCGGAGCTCCGGCGAACCCACGGCGGCGGGCGGGCGGGCCCGAGCTTCGCAGATGAGTGGCGTGAGGAGGGCAGCGGGGCGGCCCAAGATCGGCGACCTCGCGACCAGCGACGTGGTGGTGCGGCTGCGGACGCCGGAGGGCCGCGACGAGTGGCTCTACTGCCACTCCGGCGTGCTCGCCGCCGGGAGCAGGTACTTCGCCGACCGCCTCTCCGACGACTGGCCCACGTGCCAGATCCTCGGCTCCCGCTACTGCGTCGAGGTCCACTGCCAGGAGCTGGACCTCAGCCCCCACGTCACCGCGCTCCGCCTCCTCTACGCCGCCGAGCCGTGCTCCCGCTTCGGCGTCCGCGGCGCGCTCGGCGTCCTCCAGGCCGCCGCCCACCTCGCCTGCCCGCGCGTCGCCGCCGCCTGCGTCGACTACCTGGAGTCCGCGCCGTGGGACGAGGCCGACGAGGAGGAGATCCTCAGGACCATCCCTTGCCTCGGCCCCCAGTACGAGTGCGTCCTCGCGCGGCTCCGCCCGATCGATCCCGCGCCGGTGGCCGGCATCCTCCTCTCGGCGTTCCGGCACGCGACGTCGACGCGCTCGCCGCCGCAGGAGCTCAAGTCCGCGGCTCAGGAGCAGCTGGAGTACATGCTCACCGAAGACGACGACGCGCCATTGTTAGCCTTCGATGATGACATTGTCAGGTCTCAAGTGAAGGATTGTGTTGCAGCTTTGCTGAGCAGGTTCAGTGGGTTCACGAGTTCAATCCTGATGGAACAGGGAGAGGCGCCTTTAGGCCACGGCGACGCCGAGGTTCAGCAGGAGCTGCATTCTCTTGTTTCAGATATCTCCTGGGTCTGTCAGATCTTGAGCAAGCTGGAGATGATGAAATGTGTTGTTGTTTACTGGATTGGGGTTTCATCCGATGTCGTTGAAGCTGTCGACAAAGCTTGTGGGGGAATCAGCTGCCTGAAGACTAGATTGAAGGTGATTGAGGTGTCTGCAAAGGTCCTGGAGGCGATTGCATTTGGCAACATTGTTCTCCCAACCGAGAAACGTTGTGATGCTGTCAATGTTTGGATTGGCTTTGCAAGGAGAACAAAGCCTTTGGTCGGACATCCCGAACACGATGACGATGACGGTGATGCTGAAGCACCTAAGATCAACCTAGACAGTGAGGTCTGGCAGAGCCTGGAATCAGCTATTGTTTCAATTGTGCTAACGCTACCGTCGAACAGTCAAGCTGACATTTTGTCAGATTGGCTTCAGTCGAAGCATGCTAAGTATCCAGACTTGACGGAGGCGTTTGAAGTGTGGTGTTATAGATCAAAGGCTGCTAAGAGAAGACTCTCCTTCTTGAGCCATGCCAATAGGGTATCTTGATTCTTCACTTGTCCTTCAAAATCAAACACAGGGGAAATGTCCTGGCTGTTTGTACTCACTACAGGCAGCACAGAGTGCCTTTGACCGACATCAAATATCATGAAATTCCAATTTGTCCTTCCTTTTATCACTGTTGTCATCGGAGTTGCTTGAGTATATCACTGTTGTCTAAAATGATAGATAAACAAGATGCCATAACAGTTTGGTTGACAAAAAAACAGTGAGAATATATGTTCCAAATTCCAACAAGCATATTTCCACATGGATAGCAGCTTCTGGAAGGATATCTGGGTAGGAAAAGTACCTTTAAATCTTGTGTTGGCAAATATTTTCTCAACATGTGAGGGTCCTGATTTAAGGTGGCTGAATGCTGGGACGATGGCTCTTGGAGCATAACTTAGAACCTTTGGACAAATAGTTCATGTATGCTTGCACTCACAGAAGCGGCTAATGTTTGCATGATCTAGCTTTGCAAGTCTTGAATTATCTACTTACAAGTTACTTGGAAGGTTCTAAGTTGTACAATCAGCCGGCCACATATATCTTCCTTTGCTACATGGTTCTTTAATAACCTGTTCATCCGCTCAGGATTTCAGCAGCTTATTGAAGTCTTCTTGAAGGAACCGAAGACTGTCCAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAAAAACAGTTGCTTTGGGAAGGACAAAGAGAGAGCTCTGGCAAAGCTCAAATGGCAACAGAAATGCCGAAGACTGAACAAGAGTTCTGTCAGGCTTTGCATGGCACCTGAAGACTTAGCTCCTTTTTTTTTTTTTTGAGATGGTAGACTTACTTATACTATTTTGTAAACCATCTGAAACTGAACATGAGCACCAAATTAATCGCTGTTCTGTCTCTGGTGTACATTGGCATGTGGAGTTATGGAGTTTCAG]

[+] EMBL AK103292             [ACTATCATTTCCCCAATCTCCACCTCACCTGAGCCGTCGCCGGAGCTCCGGCGAACCCACGGCGGCGGGCGGGCGGGCCCGAGCTTCGCAGATGAGTGGCGTGAGGAGGGCAGCGGGGCGGCCCAAGATCGGCGACCTCGCGACCAGCGACGTGGTGGTGCGGCTGCGGACGCCGGAGGGCCGCGACGAGTGGCTCTACTGCCACTCCGGCGTGCTCGCCGCCGGGAGCAGGTACTTCGCCGACCGCCTCTCCGACGACTGGCCCACGTGCCAGATCCTCGGCTCCCGCTACTGCGTCGAGGTCCACTGCCAGGAGCTGGACCTCAGCCCCCACGTCACCGCGCTCCGCCTCCTCTACGCCGCCGAGCCGTGCTCCCGCTTCGGCGTCCGCGGCGCGCTCGGCGTCCTCCAGGCCGCCGCCCACCTCGCCTGCCCGCGCGTCGCCGCCGCCTGCGTCGACTACCTGGAGTCCGCGCCGTGGGACGAGGCCGACGAGGAGGAGATCCTCAGGACCATCCCTTGCCTCGGCCCCCAGTACGAGTGCGTCCTCGCGCGGCTCCGCCCGATCGATCCCGCGCCGGTGGCCGGCATCCTCCTCTCGGCGTTCCGGCACGCGACGTCGACGCGCTCGCCGCCGCAGGAGCTCAAGTCCGCGGCTCAGGAGCAGCTGGAGTACATGCTCACCGAAGACGACGACGCGCCATTGTTAGCCTTCGATGATGACATTGTCAGGTCTCAAGTGAAGGATTGTGTTGCAGCTTTGCTGAGCAGGTTCAGTGGGTTCACGAGTTCAATCCTGATGGAACAGGGAGAGGCGCCTTTAGGCCACGGCGACGCCGAGGTTCAGCAGGAGCTGCATTCTCTTGTTTCAGATATCTCCTGGGTCTGTCAGATCTTGAGCAAGCTGGAGATGATGAAATGTGTTGTTGTTTACTGGATTGGGGTTTCATCCGATGTCGTTGAAGCTGTCGACAAAGCTTGTGGGGGAATCAGCTGCCTGAAGACTAGATTGAAGGTGATTGAGGTGTCTGCAAAGGTCCTGGAGGCGATTGCATTTGGCAACATTGTTCTCCCAACCGAGAAACGTTGTGATGCTGTCAATGTTTGGATTGGCTTTGCAAGGAGAACAAAGCCTTTGGTCGGACATCCCGAACACGATGACGATGACGGTGATGCTGAAGCACCTAAGATCAACCTAGACAGTGAGGTCTGGCAGAGCCTGGAATCAGCTATTGTTTCAATTGTGCTAACGCTACCGTCGAACAGTCAAGCTGACATTTTGTCAGATTGGCTTCAGTCGAAGCATGCTAAGTATCCAGACTTGACGGAGGCGTTTGAAGTGTGGTGTTATAGATCAAAGGCTGCTAAGAGAAGACTCTCCTTCTTGAGCCATGCCAATAGGGTATCTTGATTCTTCACTTGTCCTTCAAAATCAAACACAGGGGAAATGTCCTGGCTGTTTGTACTCACTACAGGCAGCACAGAGTGCCTTTGACCGACATCAAATATCATGAAATTCCAATTTGTCCTTCCTTTTATCACTGTTGTCATCGGAGTTGCTTGAGTATATCACTGTTGTCTAAAATGATAGATAAACAAGATGCCATAACAGTTTGGTTGACAAAAAAACAGTGAGAATATATGTTCCAAATTCCAACAAGCATATTTCCACATGGATAGCAGCTTCTGGAAGGATATCTGGGTAGGAAAAGTACCTTTAAATCTTGTGTTGGCAAATATTTTCTCAACATGTGAGGGTCCTGATTTAAGGTGGCTGAATGCTGGGACGATGGCTCTTGGAGCATAACTTAGAACCTTTGGACAAATAGTTCATGTATGCTTGCACTCACAGAAGCGGCTAATGTTTGCATGATCTAGCTTTGCAAGTCTTGAATTATCTACTTACAAGTTACTTGGAAGGTTCTAAGTTGTACAATCAGCCGGCCACATATATCTTCCTTTGCTACATGGTTCTTTAATAACCTGTTCATCCGCTCAGGATTTCAGCAGCTTATTGAAGTCTTCTTGAAGGAACCGAAGACTGTCCAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAAAAACAGTTGCTTTGGGAAGGACAAAGAGAGAGCTCTGGCAAAGCTCAAATGGCAACAGAAATGCCGAAGACTGAACAAGAGTTCTGTCAGGCTTTGCATGGCACCTGAAGACTTAGCTCCTTTTTTTTTTTTTTGAGATGGTAGACTTACTTATACTATTTTGTAAACCATCTGAAACTGAACATGAGCACCAAATTAATCGCTGTTCTGTCTCTGGTGTACATTGGCATGTGGAGTTATGGAGTTTCAG]
[+] EMBL AK063550             [    TCATTTCCCCAATCTCCACCTCACCTGAGCCGTCGCCGGAGCTCCGGCGAACCCACGGCGGCGGGCGGGCGGGCCCGAGCTTCGCAGATGAGTGGCGTGAGGAGGGCAGCGGGGCGGCCCAAGATCGGCGACCTCGCGACCAGCGACGTGGTGGTGCGGCTGCGGACGCCGGAGGGCCGCGACGAGTGGCTCTACTGCCACTCCGGCGTGCTCGCCGCCGGGAGCAGGTACTTCGCCGACCGCCTCTCCGACGACTGGCCCACGTGCCAGATCCTCGGCTCCCGCTACTGCGTCGAGGTCCACTGCCAGGAGCTGGACCTCAGCCCCCACGTCACCGCGCTCCGCCTCCTCTACGCCGCCGAGCCGTGCTCCCGCTTCGGCGTCCGCGGCGCGCTCGGCGTCCTCCAGGCCGCCGCCCACCTCGCCTGCCCGCGCGTCGCCGCCGCCTGCGTCGACTACCTGGAGTCCGCGCCGTGGGACGAGGCCGACGAGGAGGAGATCCTCAGGACCATCCCTTGCCTCGGCCCCCAGTACGAGTGCGTCCTCGCGCGGCTCCGCCCGATCGATCCCGCGCCGGTGGCCGGCATCCTCCTCTCGGCGTTCCGGCACGCGACGTCGACGCGCTCGCCGCCGCAGGAGCTCAAGTCCGCGGCTCAGGAGCAGCTGGAGTACATGCTCACCGAAGACGACGACGCGCCATTGTTAGCCTTCGATGATGACATTGTCAGGTCTCAAGTGAAGGATTGTGTTGCAGCTTTGCTGAGCAGGTTCAGTGGGTTCACGAGTTCAATCCTGATGGAACAGGGAGAGGCGCCTTTAGGCCACGGCGACGCCGAGGTTCAGCAGGAGCTGCATTCTCTTGTTTCAGATATCTCCTGGGTCTGTCAGATCTTGAGCAAGCTGGAGATGATGAAATGTGTTGTTGTTTACTGGATTGGGGTTTCATCCGATGTCGTTGAAGCTGTCGACAAAGCTTGTGGGGGAATCAGCTGCCTGAAGACTAGATTGAAGGTGATTGAGGTGTCTGCAAAGGTCCTGGAGGCGATTGCATTTGGCAACATTGTTCTCCCAACCGAGAAACGTTGTGATGCTGTCAATGTTTGGATTGGCTTTGCAAGGAGAACAAAGCCTTTGGTCGGACATCCCGAACACGATGACGATGACGGTGATGCTGAAGCACCTAAGATCAACCTAGACAGTGAGGTCTGGCAGAGCCTGGAATCAGCTATTGTTTCAATTGTGCTAACGCTACCGTCGAACAGTCAAGCTGACATTTTGTCAGATTGGCTTCAGTCGAAGCATGCTAAGTATCCAGACTTGACGGAGGCGTTTGAAGTGTGGTGTTATAGATCAAAGGCTGCTAAGAGAAGACTCTCCTTCTTGAGCCATGCCAATAGGGTATCTTGATTCTTCACTTGTCCTTCAAAATCAAACACAGGGGAAATGTCCTGGCTGTTTGTACTCACTACAGGCAGCACAGAGTGCCTTTGACCGACATCAAATATCATGAAATTCCAATTTGTCCTTCCTTTTATCACTGTTGTCATCGGAGTTGCTTGAGTATATCACTGTTGTCTAAAATGATAGATAAACAAGATGCCATAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK105114             [            CCAATCTCCACCTCACCTGAGCCGTCGCCGGAGCTCCGGCGAACCCACGGCGGCGGGCGGGCGGGCCCGAGCTTCGCAGATGAGTGGCGTGAGGAGGGCAGCGGGGCGGCCCAAGATCGGCGACCTCGCGACCAGCGACGTGGTGGTGCGGCTGCGGACGCCGGAGGGCCGCGACGAGTGGCTCTACTGCCACTCCGGCGTGCTCGCCGCCGGGAGCAGGTACTTCGCCGACCGCCTCTCCGACGACTGGCCCACGTGCCAGATCCTCGGCTCCCGCTACTGCGTCGAGGTCCACTGCCAGGAGCTGGACCTCAGCCCCCACGTCACCGCGCTCCGCCTCCTCTACGCCGCCGAGCCGTGCTCCCGCTTCGGCGTCCGCGGCGCGCTCGGCGTCCTCCAGGCCGCCGCCCACCTCGCCTGCCCGCGCGTCGCCGCCGCCTGCGTCGACTACCTGGAGTCCGCGCCGTGGGACGAGGCCGACGAGGAGGAGATCCTCAGGACCATCCCTTGCCTCGGCCCCCAGTACGAGTGCGTCCTCGCGCGGCTCCGCCCGATCGATCCCGCGCCGGTGGCCGGCATCCTCCTCTCGGCGTTCCGGCACGCGACGTCGACGCGCTCGCCGCCGCAGGAGCTCAAGTCCGCGGCTCAGGAGCAGCTGGAGTACATGCTCACCGAAGACGACGACGCGCCATTGTTAGCCTTCGATGATGACATTGTCAGGTCTCAAGTGAAGGATTGTGTTGCAGCTTTGCTGAGCAGGTTCAGTGGGTTCACGAGTTCAATCCTGATGGAACAGGGAGAGGCGCCTTTAGGCCACGGCGACGCCGAGGTTCAGCAGGAGCTGCATTCTCTTGTTTCAGATATCTCCTGGGTCTGTCAGATCTTGAGCAAGCTGGAGATGATGAAATGTGTTGTTGTTTACTGGATTGGGGTTTCATCCGATGTCGTTGAAGCTGTCGACAAAGCTTGTGGGGGAATCAGCTGCCTGAAGACTAGATTGAAGGTGATTGAGGTGTCTGCAAAGGTCCTGGAGGCGATTGCATTTGGCAACATTGTTCTCCCAACCGAGAAACGTTGTGATGCTGTCAATGTTTGGATTGGCTTTGCAAGGAGAACAAAGCCTTTGGTCGGACATCCCGAACACGATGACGATGACGGTGATGCTGAAGCACCTAAGATCAACCTAGACAGTGAGGTCTGGCAGAGCCTGGAATCAGCTATTGTTTCAATTGTGCTAACGCTACCGTCGAACAGTCAAGCTGACATTTTGTCAGATTGGCTTCAGTCGAAGCATGCTAAGTATCCAGACTTGACGGAGGCGTTTGAAGTGTGGTGTTATAGATCAAAGGCTGCTAAGAGAAGACTCTCCTTCTTGAGCCATGCCAATAGGGTATCTTGATTCTTCACTTGTCCTTCAAAATCAAACACAGGGGAAATGTCCTGGCTGTTTGTACTCACTACAGGCAGCACAGAGTGCCTTTGACCGACATCAAATATCATGAAATTCCAATTTGTCCTTCCTTTTATCACTGTTGTCATCGGAGTTGCTTGAGTATATCACTGTTGTCTAAAATGATAGATAAACAAGATGCCATAACAGTTTGGTTGACAAAAAAACAGTGAGAATATATGTTCCAAATTCCAACAAGCATATTTCCACATGGATAGCAGCTTCTGGAAGGATATCTGGGTAGGAAAAGTACCTTTAAATCTTGTGTTGGCAAATATTTTCTCAACATGTGAGGGTCCTGATTTAAGGTGGCTGAATGCTGGGACGATGGCTCTTGGAGCATAACTTAGAACCTTTGGACAAATAGTTCATGTATGCTTGCACTCACAGAAGCGGCTAATGTTTGCATGATCTAGCTTTGCAAGTCTTGAATTATCTACTTACAAGTTACTTGGAAGGTTCTAAGTTGTACAATCAGCCGGCCACATATATCTTCCTTTGCTACATGGTTCTTTAATAACCTGTTCATCCGCTCAGGATTTCAGCAGCTTATTGAAGTCTTCTTGAAGGAACCGAAGACTGTCCAAAA                                                                                                                                                                                                                                                                                                            ]


>consensus_4827#0 ACTATCATTTCCCCAATCTCCACCTCACCTGAGCCGTCGCCGGAGCTCCGGCGAACCCAC GGCGGCGGGCGGGCGGGCCCGAGCTTCGCAGATGAGTGGCGTGAGGAGGGCAGCGGGGCG GCCCAAGATCGGCGACCTCGCGACCAGCGACGTGGTGGTGCGGCTGCGGACGCCGGAGGG CCGCGACGAGTGGCTCTACTGCCACTCCGGCGTGCTCGCCGCCGGGAGCAGGTACTTCGC CGACCGCCTCTCCGACGACTGGCCCACGTGCCAGATCCTCGGCTCCCGCTACTGCGTCGA GGTCCACTGCCAGGAGCTGGACCTCAGCCCCCACGTCACCGCGCTCCGCCTCCTCTACGC CGCCGAGCCGTGCTCCCGCTTCGGCGTCCGCGGCGCGCTCGGCGTCCTCCAGGCCGCCGC CCACCTCGCCTGCCCGCGCGTCGCCGCCGCCTGCGTCGACTACCTGGAGTCCGCGCCGTG GGACGAGGCCGACGAGGAGGAGATCCTCAGGACCATCCCTTGCCTCGGCCCCCAGTACGA GTGCGTCCTCGCGCGGCTCCGCCCGATCGATCCCGCGCCGGTGGCCGGCATCCTCCTCTC GGCGTTCCGGCACGCGACGTCGACGCGCTCGCCGCCGCAGGAGCTCAAGTCCGCGGCTCA GGAGCAGCTGGAGTACATGCTCACCGAAGACGACGACGCGCCATTGTTAGCCTTCGATGA TGACATTGTCAGGTCTCAAGTGAAGGATTGTGTTGCAGCTTTGCTGAGCAGGTTCAGTGG GTTCACGAGTTCAATCCTGATGGAACAGGGAGAGGCGCCTTTAGGCCACGGCGACGCCGA GGTTCAGCAGGAGCTGCATTCTCTTGTTTCAGATATCTCCTGGGTCTGTCAGATCTTGAG CAAGCTGGAGATGATGAAATGTGTTGTTGTTTACTGGATTGGGGTTTCATCCGATGTCGT TGAAGCTGTCGACAAAGCTTGTGGGGGAATCAGCTGCCTGAAGACTAGATTGAAGGTGAT TGAGGTGTCTGCAAAGGTCCTGGAGGCGATTGCATTTGGCAACATTGTTCTCCCAACCGA GAAACGTTGTGATGCTGTCAATGTTTGGATTGGCTTTGCAAGGAGAACAAAGCCTTTGGT CGGACATCCCGAACACGATGACGATGACGGTGATGCTGAAGCACCTAAGATCAACCTAGA CAGTGAGGTCTGGCAGAGCCTGGAATCAGCTATTGTTTCAATTGTGCTAACGCTACCGTC GAACAGTCAAGCTGACATTTTGTCAGATTGGCTTCAGTCGAAGCATGCTAAGTATCCAGA CTTGACGGAGGCGTTTGAAGTGTGGTGTTATAGATCAAAGGCTGCTAAGAGAAGACTCTC CTTCTTGAGCCATGCCAATAGGGTATCTTGATTCTTCACTTGTCCTTCAAAATCAAACAC AGGGGAAATGTCCTGGCTGTTTGTACTCACTACAGGCAGCACAGAGTGCCTTTGACCGAC ATCAAATATCATGAAATTCCAATTTGTCCTTCCTTTTATCACTGTTGTCATCGGAGTTGC TTGAGTATATCACTGTTGTCTAAAATGATAGATAAACAAGATGCCATAACAGTTTGGTTG ACAAAAAAACAGTGAGAATATATGTTCCAAATTCCAACAAGCATATTTCCACATGGATAG CAGCTTCTGGAAGGATATCTGGGTAGGAAAAGTACCTTTAAATCTTGTGTTGGCAAATAT TTTCTCAACATGTGAGGGTCCTGATTTAAGGTGGCTGAATGCTGGGACGATGGCTCTTGG AGCATAACTTAGAACCTTTGGACAAATAGTTCATGTATGCTTGCACTCACAGAAGCGGCT AATGTTTGCATGATCTAGCTTTGCAAGTCTTGAATTATCTACTTACAAGTTACTTGGAAG GTTCTAAGTTGTACAATCAGCCGGCCACATATATCTTCCTTTGCTACATGGTTCTTTAAT AACCTGTTCATCCGCTCAGGATTTCAGCAGCTTATTGAAGTCTTCTTGAAGGAACCGAAG ACTGTCCAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAA AAAACAGTTGCTTTGGGAAGGACAAAGAGAGAGCTCTGGCAAAGCTCAAATGGCAACAGA AATGCCGAAGACTGAACAAGAGTTCTGTCAGGCTTTGCATGGCACCTGAAGACTTAGCTC CTTTTTTTTTTTTTTGAGATGGTAGACTTACTTATACTATTTTGTAAACCATCTGAAACT GAACATGAGCACCAAATTAATCGCTGTTCTGTCTCTGGTGTACATTGGCATGTGGAGTTA TGGAGTTTCAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)