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Oryza sativa
cluster # 4831 cluster # 4831       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4831#0 length = 2957 sequences # 3  

consensusID : consensus_4831#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2957
fasta sequence
                              [ACCCCATCGCCTCCGCTCCCCTCCGCGCCATCGTCGTAGGCTAGTAGCTCTCCCTGGTCGGCGGCGATGGACGCCACCGGCCGCGGGGTTTTCCCCAACAAGCCCGCCCTCCCTGCCGGCCCCAAGAAGCGCCCCCCTCCGCACACGGTGCTCCTGCCGGCCACGCCGCCGCCGCCGCCGTCGCGCTCCTCGCTCCCGCTCGACTCGCTTCTCCTCCACCTCACCGCGGCCCCGCCGCCGCCGCAGCCGCCGGCCACGCGCCGGCCGCATCCCACCCCGACCCCGCCGCACTCCTTCCTCTCCCCCGCCGCGCAGTCCCTCGTGGCCGCTATCTCCTCGCAGCCGCTCCCCTCGCTCCCGGCTTTCCTCTCCTCCCGCCGTGACGAGCTGCTGCGCTCTGACCTCCCCTCCCTCCTCAAGGCGCTCGAGCTCTCTGGCCACTGGGAGTGGGCTCTCGCGCTCCTCCGCTGGGCCAGCGACGAGGGCGCCGCCGATGCCGCGGCGCTCGAGATGGTCGTCCGCGCGCTCGGCCGCGAGGGCCAGCACGACGTCGTCTGCGACCTGCTCGACGAAATGCCGCTCCCGCCCGGATCACGCCTGGACGTCCGCGCCTACACCACGGTGCTTCACGCGCTCTCCCGCGCGGGCCGGTACGAGCGCGCGCTCCAGCTGTTCGCCGAGCTCCGGCGCCAGGGGGTGGTGCCCACGATCGTCACCTACAACGTCGTGCTCGACGTGTACGGCCGGATGGGGCGCTCGTGGCCGCGTATCGTCGCTCTACTGGAGGAGATGCGTGCCGCCGGCGTCGAGCCCGACGACTTCACTGCCAGCACAGTGATCGCGGCATGCGGCCGTGATGGCCTCCTTGATCAGGCGGTCGCCTTCTTTGAGGACCTCAAGGCCCGTGGCCACGTCCCGTGCGTTGTCACATACAATGCACTCCTGCAAGTGTTTGGCAAGGCCGGGAACTACACTGAGGCGCTGCGGGTGCTCAAGGAAATGGAGGATAGTGGCTGCCAGCCGGATGCCGTCACATACAATGAGCTCGCCGGGACATATGCCAGGGCTGGGTTCTTTGAGGAGGCTGCCAAGTGCCTTGACACAATGACCAGCAAGGGATTATTGCCTAACACATTCACGTACAATACTGTCATGACGGCATACGCGAATGTCGGTAGGGTGGATGAAGCACTAGCTCTGTTTGATCGAATGAAGAAGAATGGGTATGTTCCGAATGTGAACACCTACAATCTTATCTTTGGTATGCTGGGGAAGAAATCAAGGTTCACCGCGATGCTGGAGATGCTTGAGGAGATGTCAAGGAGTGGATGCACACCGAATCGGGTCACCTGGAACACGATGTTGGCCGTCTGTGGGAAGCGGGGTATGGAGGACTATGTCACCAGGGTACTCAACGGGATGAAATCTTGTGGGGTTGAGCTGAGCCGAGATACCTACAACACACTGATATCTGCCTATGGTCGATGTGGTTCGAGGACCTATGCTTTTAAGATGTATGATGAAATGATCAGTTCTGGCTTCACCCCTTGCCTCACCACATACAATGCTTTGCTGAATGTGCTGTCAAGACAAGGTGATTGGTCCACTGCTCAGTCCATAGTAAGCAAAATGCTGAAGAATGGTTTCAAGCCGAATGATCAGTCATATTCACTACTGCTCCAGTGCTATGCAAAGGGTGGCAATGCAGCTGGGATAGAGTCTATCGAGAAAGAAGTTTATGTCGGTACAATTTTTCCTAGTTGGGTTATCTTGCGGACACTTGTGATCGCAAACTTCAAGTGCCGTAGATTAGAAGGGGTTGAGAAGGCATTTCAAGAGGTAAAGGCACAGGGTTACAAGCCTGATCTTGTCATATTCAACTCCATGCTTGCAATGTATGCAAAGAATGGATTATATAGCAAGGCCACAGAGATGTTCGATTCAATAAAGCAGAGTGGGCTGAGCCCTGATCTAATCACTTACAACAGCTTAATGGACATGTATGCCAAGTCCAATGAGTCTTGGGAAGCTGAGAAAATACTTAAACAGCTCAAAAGTTCTCAGGTGAAGCCTGACGTTGTGTCATATAACACCGTCATAAACGGATTCTGCAAGCAAGGTCTGATCAAAGAAGCTCAGAGGATCCTATCTGAGATGATTGCTGATGGCATGGCTCCATGTGTTGTAACCTATCACACACTAGTTGGAGGATACGCCAGCCTGGAGATGTTTAATGAGGCAAGAGAGGTTGTCAACTACATGATTCACCACAACTTGAAGCCTATGGAGCTGACATACAGGAGAGTAGTCGACAGTTACTGCAAAGCCAAGCGGTATGATGAGGCCCGTGAGTTCCTGTCTGAAATTTCAGATACTGACCAAAATTTTGATCAGAAGTTGCAGCACATGCTTGAAGCCCGTATAAAGGATGCTCAATTTGGAAGATAAGCTACTATCCCAACGTGTATCATCTTATGTCATTTTTATCTTTGTGTGCTCTTCAAGGATATGGAGTTTCCAAGTTTTGATAGGGAAGTCAGTGTAGTATTACTTGTGAAGAGCCTGCATTTGCCATGGGTGGCACGCTACTGCACCAAATGGTGCCGCACAACGTCAAATTAAATGGATTTTCCTCTCATCTTCAACAGGTGTACAGTGTACTTCTGAAGTCACATTCGCGGTGCCTAAGTACAGAATCTGGTAGATTGTCCGATTGTTTTGAAGAGTCAAGATTGATTTGATCTAGTGCAACTTAATCGGTTAGCAGCATTATCAATTTCTTATGGACTGGATTGTCCATGTGTTTTT-CGATTTT-CAGGTCA-CTTGTTTATGCTTGAATGGTTTCTATAGGGCTAACCTGTTTATAAAAAAAAAATGTAGAATACCATGTTTTTTTTGACGCAATAGAATACCGTGTTAGACTTTTGAACTATCCATTGATAATGATAATAAAGTCT]

[+] EMBL AK067135             [ACCCCATCGCCTCCGCTCCCCTCCGCGCCATCGTCGTAGGCTAGTAGCTCTCCCTGGTCGGCGGCGATGGACGCCACCGGCCGCGGGGTTTTCCCCAACAAGCCCGCCCTCCCTGCCGGCCCCAAGAAGCGCCCCCCTCCGCACACGGTGCTCCTGCCGGCCACGCCGCCGCCGCCGCCGTCGCGCTCCTCGCTCCCGCTCGACTCGCTTCTCCTCCACCTCACCGCGGCCCCGCCGCCGCCGCAGCCGCCGGCCACGCGCCGGCCGCATCCCACCCCGACCCCGCCGCACTCCTTCCTCTCCCCCGCCGCGCAGTCCCTCGTGGCCGCTATCTCCTCGCAGCCGCTCCCCTCGCTCCCGGCTTTCCTCTCCTCCCGCCGTGACGAGCTGCTGCGCTCTGACCTCCCCTCCCTCCTCAAGGCGCTCGAGCTCTCTGGCCACTGGGAGTGGGCTCTCGCGCTCCTCCGCTGGGCCAGCGACGAGGGCGCCGCCGATGCCGCGGCGCTCGAGATGGTCGTCCGCGCGCTCGGCCGCGAGGGCCAGCACGACGTCGTCTGCGACCTGCTCGACGAAATGCCGCTCCCGCCCGGATCACGCCTGGACGTCCGCGCCTACACCACGGTGCTTCACGCGCTCTCCCGCGCGGGCCGGTACGAGCGCGCGCTCCAGCTGTTCGCCGAGCTCCGGCGCCAGGGGGTGGTGCCCACGATCGTCACCTACAACGTCGTGCTCGACGTGTACGGCCGGATGGGGCGCTCGTGGCCGCGTATCGTCGCTCTACTGGAGGAGATGCGTGCCGCCGGCGTCGAGCCCGACGACTTCACTGCCAGCACAGTGATCGCGGCATGCGGCCGTGATGGCCTCCTTGATCAGGCGGTCGCCTTCTTTGAGGACCTCAAGGCCCGTGGCCACGTCCCGTGCGTTGTCACATACAATGCACTCCTGCAAGTGTTTGGCAAGGCCGGGAACTACACTGAGGCGCTGCGGGTGCTCAAGGAAATGGAGGATAGTGGCTGCCAGCCGGATGCCGTCACATACAATGAGCTCGCCGGGACATATGCCAGGGCTGGGTTCTTTGAGGAGGCTGCCAAGTGCCTTGACACAATGACCAGCAAGGGATTATTGCCTAACACATTCACGTACAATACTGTCATGACGGCATACGCGAATGTCGGTAGGGTGGATGAAGCACTAGCTCTGTTTGATCGAATGAAGAAGAATGGGTATGTTCCGAATGTGAACACCTACAATCTTATCTTTGGTATGCTGGGGAAGAAATCAAGGTTCACCGCGATGCTGGAGATGCTTGAGGAGATGTCAAGGAGTGGATGCACACCGAATCGGGTCACCTGGAACACGATGTTGGCCGTCTGTGGGAAGCGGGGTATGGAGGACTATGTCACCAGGGTACTCAACGGGATGAAATCTTGTGGGGTTGAGCTGAGCCGAGATACCTACAACACACTGATATCTGCCTATGGTCGATGTGGTTCGAGGACCTATGCTTTTAAGATGTATGATGAAATGATCAGTTCTGGCTTCACCCCTTGCCTCACCACATACAATGCTTTGCTGAATGTGCTGTCAAGACAAGGTGATTGGTCCACTGCTCAGTCCATAGTAAGCAAAATGCTGAAGAATGGTTTCAAGCCGAATGATCAGTCATATTCACTACTGCTCCAGTGCTATGCAAAGGGTGGCAATGCAGCTGGGATAGAGTCTATCGAGAAAGAAGTTTATGTCGGTACAATTTTTCCTAGTTGGGTTATCTTGCGGACACTTGTGATCGCAAACTTCAAGTGCCGTAGATTAGAAGGGGTTGAGAAGGCATTTCAAGAGGTAAAGGCACAGGGTTACAAGCCTGATCTTGTCATATTCAACTCCATGCTTGCAATGTATGCAAAGAATGGATTATATAGCAAGGCCACAGAGATGTTCGATTCAATAAAGCAGAGTGGGCTGAGCCCTGATCTAATCACTTACAACAGCTTAATGGACATGTATGCCAAGTCCAATGAGTCTTGGGAAGCTGAGAAAATACTTAAACAGCTCAAAAGTTCTCAGGTGAAGCCTGACGTTGTGTCATATAACACCGTCATAAACGGATTCTGCAAGCAAGGTCTGATCAAAGAAGCTCAGAGGATCCTATCTGAGATGATTGCTGATGGCATGGCTCCATGTGTTGTAACCTATCACACACTAGTTGGAGGATACGCCAGCCTGGAGATGTTTAATGAGGCAAGAGAGGTTGTCAACTACATGATTCACCACAACTTGAAGCCTATGGAGCTGACATACAGGAGAGTAGTCGACAGTTACTGCAAAGCCAAGCGGTATGATGAGGCCCGTGAGTTCCTGTCTGAAATTTCAGATACTGACCAAAATTTTGATCAGAAGTTGCAGCACATGCTTGAAGCCCGTATAAAGGATGCTCAATTTGGAAGATAAGCTACTATCCCAACGTGTATCATCTTATGTCATTTTTATCTTTGTGTGCTCTTCAAGGATATGGAGTTTCCAAGTTTTGATAGGGAAGTCAGTGTAGTATTACTTGTGAAGAGCCTGCATTTGCCATGGGTGGCACGCTACTGCACCAAATGGTGCCGCACAACGTCAAATTAAATGGATTTTCCTCTCATCTTCAACAGGTGTACAGTGTACTTCTGAAGTCACATTCGCGGTGCCTAAGTACAGAATCTGGTAGATTGTCCGATTGTTTTGAAGAGTCAAGATTGATTTGATCTAGTGCAACTTAATCGGTTAGCAGCATTATCAATTTCTTATGGACTGGATTGTCCATGTGTTTTT CGATTTT CAGGTCA CTTGTTTATGCTTGAATGGTTTCTATAGGGCTAACCTGTTTATAAAAAAAAAATGTAGAATACCATGTTTTTTTTGACGCAATAGAATACCGTGTTAGACTTTTGAACTATCCATTGATAATGATAATAAAGTCT]
[+] EMBL CB638202             [                                                                                                                                                                                                                                                           GGCCACGCGCCGGCCGCATCCCACCCCGACCCCGCCGCACTCCTTCCTCTCCCCCGCCGCGCAGTCCCTCGTGGCCGCTATCTCCTCGCAGCCGCTCCCCTCGCTCCCGGCTTTCCTCTCCTCCCGCCGTGACGAGCTGCTGCGCTCTGACCTCCCCTCCCTCCTCAAGGCGCTCGAGCTCTCTGGCCACTGGGAGTGGGCTCTCGCGCTCCTCCGCTGGGCCAGCGACGAGGGCGCCGCCGATGCCGCGGCGCTCGAGATGGTCGTCCGCGCGCTCGGCCGCGAGGGCCAGCACGACGTCGTCTGCGACCTGCTCGACGAAATGCCGCTCCCGCCCGGATCACGCCTGGACGTCCGCGCCTACACCACGGTGCTTCACGCGCTCTCCCGCGCGGGCCGGTACGAGCGCGCGCTCCAGCTGTTCGCCGAGCTCCGGCGCCAGGGGGTGGTGCCCACGATCGTCACCTACAACGTCGTGCTCGACGTGTACGGCCGGATGGGGCGCTCGTGGCCGCGTATCGTCGCTCTACTGGAGGAGATGCGTGCCGCCGGCGTCGAGCCCGACGACTTCACTGCCAGCACAGTGATCGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB638203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTCGACAGTTACTGCAAAGCCAAGCGGTATGATGAGGCCCGTGAGTTCCTGTCTGAAATTTCAGATACTGACCAAAATTTTGATCAGAAGTTGCAGCACATGCTTGAAGCCCGTATAAAGGATGCTCAATTTGGAAGATAAGCTACTATGCCAACGTGGATCATCTTATGTCATTTTTATCTTTGTGTGCTCTTCAAGGATATGGAGTTTCCAAGTTTTGATAGGGAAGTCAGTGTAGTATTACTTGTGAAGAGCCTGCATTTGCCATGGGTGGCACGCTACTGCACCAAATGGTGCCGCACAACGTCAAATTAAATGGATTTTCCTCTCATCTTCAACAGGTGTACAGTGTACTTTTGAAGTCACATTCGCGGTGCCTAAGTACAGAATTTGGTAGATTGTCCGATTGTTTTGAAGAGTCAAGATTGATTTGATTTAGTGCAACTTAATCGGTTAGCAGCATTATCAATTTTTTATGGACTGGATTGTCCATGTGTTTTTCCGATTTTCCAGGTCACCTTGTTTAAGCTTGAATGGTTTCTATAGGGCTAACCTGTTTATAAAAAAAAAATGTAGAATACCATGTTTTTTTTGACGCAATAGAATACCGTGTT                                       ]


>consensus_4831#0 ACCCCATCGCCTCCGCTCCCCTCCGCGCCATCGTCGTAGGCTAGTAGCTCTCCCTGGTCG GCGGCGATGGACGCCACCGGCCGCGGGGTTTTCCCCAACAAGCCCGCCCTCCCTGCCGGC CCCAAGAAGCGCCCCCCTCCGCACACGGTGCTCCTGCCGGCCACGCCGCCGCCGCCGCCG TCGCGCTCCTCGCTCCCGCTCGACTCGCTTCTCCTCCACCTCACCGCGGCCCCGCCGCCG CCGCAGCCGCCGGCCACGCGCCGGCCGCATCCCACCCCGACCCCGCCGCACTCCTTCCTC TCCCCCGCCGCGCAGTCCCTCGTGGCCGCTATCTCCTCGCAGCCGCTCCCCTCGCTCCCG GCTTTCCTCTCCTCCCGCCGTGACGAGCTGCTGCGCTCTGACCTCCCCTCCCTCCTCAAG GCGCTCGAGCTCTCTGGCCACTGGGAGTGGGCTCTCGCGCTCCTCCGCTGGGCCAGCGAC GAGGGCGCCGCCGATGCCGCGGCGCTCGAGATGGTCGTCCGCGCGCTCGGCCGCGAGGGC CAGCACGACGTCGTCTGCGACCTGCTCGACGAAATGCCGCTCCCGCCCGGATCACGCCTG GACGTCCGCGCCTACACCACGGTGCTTCACGCGCTCTCCCGCGCGGGCCGGTACGAGCGC GCGCTCCAGCTGTTCGCCGAGCTCCGGCGCCAGGGGGTGGTGCCCACGATCGTCACCTAC AACGTCGTGCTCGACGTGTACGGCCGGATGGGGCGCTCGTGGCCGCGTATCGTCGCTCTA CTGGAGGAGATGCGTGCCGCCGGCGTCGAGCCCGACGACTTCACTGCCAGCACAGTGATC GCGGCATGCGGCCGTGATGGCCTCCTTGATCAGGCGGTCGCCTTCTTTGAGGACCTCAAG GCCCGTGGCCACGTCCCGTGCGTTGTCACATACAATGCACTCCTGCAAGTGTTTGGCAAG GCCGGGAACTACACTGAGGCGCTGCGGGTGCTCAAGGAAATGGAGGATAGTGGCTGCCAG CCGGATGCCGTCACATACAATGAGCTCGCCGGGACATATGCCAGGGCTGGGTTCTTTGAG GAGGCTGCCAAGTGCCTTGACACAATGACCAGCAAGGGATTATTGCCTAACACATTCACG TACAATACTGTCATGACGGCATACGCGAATGTCGGTAGGGTGGATGAAGCACTAGCTCTG TTTGATCGAATGAAGAAGAATGGGTATGTTCCGAATGTGAACACCTACAATCTTATCTTT GGTATGCTGGGGAAGAAATCAAGGTTCACCGCGATGCTGGAGATGCTTGAGGAGATGTCA AGGAGTGGATGCACACCGAATCGGGTCACCTGGAACACGATGTTGGCCGTCTGTGGGAAG CGGGGTATGGAGGACTATGTCACCAGGGTACTCAACGGGATGAAATCTTGTGGGGTTGAG CTGAGCCGAGATACCTACAACACACTGATATCTGCCTATGGTCGATGTGGTTCGAGGACC TATGCTTTTAAGATGTATGATGAAATGATCAGTTCTGGCTTCACCCCTTGCCTCACCACA TACAATGCTTTGCTGAATGTGCTGTCAAGACAAGGTGATTGGTCCACTGCTCAGTCCATA GTAAGCAAAATGCTGAAGAATGGTTTCAAGCCGAATGATCAGTCATATTCACTACTGCTC CAGTGCTATGCAAAGGGTGGCAATGCAGCTGGGATAGAGTCTATCGAGAAAGAAGTTTAT GTCGGTACAATTTTTCCTAGTTGGGTTATCTTGCGGACACTTGTGATCGCAAACTTCAAG TGCCGTAGATTAGAAGGGGTTGAGAAGGCATTTCAAGAGGTAAAGGCACAGGGTTACAAG CCTGATCTTGTCATATTCAACTCCATGCTTGCAATGTATGCAAAGAATGGATTATATAGC AAGGCCACAGAGATGTTCGATTCAATAAAGCAGAGTGGGCTGAGCCCTGATCTAATCACT TACAACAGCTTAATGGACATGTATGCCAAGTCCAATGAGTCTTGGGAAGCTGAGAAAATA CTTAAACAGCTCAAAAGTTCTCAGGTGAAGCCTGACGTTGTGTCATATAACACCGTCATA AACGGATTCTGCAAGCAAGGTCTGATCAAAGAAGCTCAGAGGATCCTATCTGAGATGATT GCTGATGGCATGGCTCCATGTGTTGTAACCTATCACACACTAGTTGGAGGATACGCCAGC CTGGAGATGTTTAATGAGGCAAGAGAGGTTGTCAACTACATGATTCACCACAACTTGAAG CCTATGGAGCTGACATACAGGAGAGTAGTCGACAGTTACTGCAAAGCCAAGCGGTATGAT GAGGCCCGTGAGTTCCTGTCTGAAATTTCAGATACTGACCAAAATTTTGATCAGAAGTTG CAGCACATGCTTGAAGCCCGTATAAAGGATGCTCAATTTGGAAGATAAGCTACTATCCCA ACGTGTATCATCTTATGTCATTTTTATCTTTGTGTGCTCTTCAAGGATATGGAGTTTCCA AGTTTTGATAGGGAAGTCAGTGTAGTATTACTTGTGAAGAGCCTGCATTTGCCATGGGTG GCACGCTACTGCACCAAATGGTGCCGCACAACGTCAAATTAAATGGATTTTCCTCTCATC TTCAACAGGTGTACAGTGTACTTCTGAAGTCACATTCGCGGTGCCTAAGTACAGAATCTG GTAGATTGTCCGATTGTTTTGAAGAGTCAAGATTGATTTGATCTAGTGCAACTTAATCGG TTAGCAGCATTATCAATTTCTTATGGACTGGATTGTCCATGTGTTTTTCGATTTTCAGGT CACTTGTTTATGCTTGAATGGTTTCTATAGGGCTAACCTGTTTATAAAAAAAAAATGTAG AATACCATGTTTTTTTTGACGCAATAGAATACCGTGTTAGACTTTTGAACTATCCATTGA TAATGATAATAAAGTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)