cluster # 4896

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Oryza sativa
cluster # 4896 cluster # 4896 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4896#0 length = 224 sequences # 3

consensusID : consensus_4896#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 224
fasta sequence

                              [CATTGGAAATAAATCATGACTATAGCTTATCTTAGTGGTGGTTCACAGTATGAACACCACAAAATAAAATGAGATGCGGCTATGATCAAGAGTTAATGTAATGAGACTCCAGAGCGAAAGCCTGAGTAAGCTATTAGGACCCATCATAACAACAACTTTAGATCCTCACTTGCGTGGCACGAGAAGAGGGGACACCAAGAACTCCGAAGCCCGAACAGGGAACT]

[+] EMBL AA750264             [CATTGGAAATAAATCATGACTATAGCTTATCTTAGTGGTGGTTCACAGTATGAACACCACAAAATAAAATGAGATGCGGCTATGATCAAGAGTTAATGTAATGAGACTCCAGAGCGAAAGCCTGAGTAAGCTATTAGGACCCATCATAACAACAACTTTAGATCCTCACTTGCGTGGCACGAGAAGAGGGGACACCAAGAACTCCGAAGCCCGAACAGGGAACT]
[-] EMBL AA751122             [     tgAAT AATC TGACTATAGCTTATCTTAGTGGTGGTTCACAGTATGAACACCACAAAATAAAATGAGATGCGGCTATGATCAAGAGTTAATGTAATGAGACTCCAGAGCGAAAGCCTGAGTAAGCTATTAGGACCCATCATAACAACAACTTTAGATCCTCACTTCCGTGGCACGAGAAGAGGG                                  ]
[+] EMBL AA750274             [                                         TTCACAGTATGAACACCACAAAATAAAATGAGATGCGGCTATGATCAAGAGTTAATGTAATGAGACTCCAGAGCGAAAGCCTGAGTAAGCTATTAGGACCCATCATAACAACAACTTTAGATCCTCACTAGCGTGGCACGAGAAGAGGGGACNNCAAGAACTCCGAAG CCGAAGNGGGA   ]




>consensus_4896#0
CATTGGAAATAAATCATGACTATAGCTTATCTTAGTGGTGGTTCACAGTATGAACACCAC
AAAATAAAATGAGATGCGGCTATGATCAAGAGTTAATGTAATGAGACTCCAGAGCGAAAG
CCTGAGTAAGCTATTAGGACCCATCATAACAACAACTTTAGATCCTCACTTGCGTGGCAC
GAGAAGAGGGGACACCAAGAACTCCGAAGCCCGAACAGGGAACT

clustalw multiple alignements is not computed in this case