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Oryza sativa
cluster # 4974 cluster # 4974       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4974#0 length = 814 sequences # 3  

consensusID : consensus_4974#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 814
fasta sequence
                              [CGGCATGCTGCCCGGCCCTTTCATGCTTTCTGAAAAGGCCTTTGCAGTTCCACGCTAGAAGAGGGTTTAGGCCAAGGGGCGAAGTTTTTGACAAGAAAGGTTCAGATCTTTGAGCAACTGGCT-GGTGAATCTGAGAACCAA-TTAGTCGCTTCCAGTGGAGAACTAAAGTTGTTGGAAGAGCGTGGTTCAACAAGAGGCAGCTTCATCAGCAGAAAAGGAGAACCTGCTTGAAGAACCAACGAACAGTGTGGAGGCGTACAAAGAAAAGATCAATGAGTTGCCAGCATCTCTGGATTCCCCGACGTCTAAAAATCAGCTGCTTGAACAAGAAGTCAAGGACCTGTCTGACAAGTTTACAGAGCATCAAGAACAAGCTCATTCGGTTCACGAAAGAAGTCTTGAACTGGAGAGCCTGCTTCATACATCGAAGTTTGATGCTGAAGTTGCCCACACCCGGACACAGGATCTTGAAAATGAGCTGACCCCTGCAAATGAAAAGTTCAAGGAGGTTGAAGCAGACCTAGAACAGTACAGGAGCAAGGTTTTTCAGCTTTCCGATGAACTAGAAGCATACCAGACAAAAGCAGCTAGTCTTGAAGCTGTGATGGAATCTGCAAGCGAAAAGGAGAAAGAGCTTGTGGAATCTCTGGGTCAAATTACTGAAAAAAAAAAAAAACTTGAACTACTAGTATTGGAGTATGAAGAGAAGACCGAAGAATACTTAAAGGAAAAACAATCTTTGGAAGAGAGGTTGCAGAGCCAAGAATCCAAGGTGCTGGCTTTAGAGGAATCGTTGGTGAAAATGGGAGAAAAA]

[-] EMBL CA762581             [CGGCATGCTGCCCGGCCCTTTCATGCTTTCTGAAAAGGCCTTTGCAGTTCCACGCTAGAAGAGGGTTTAGGCCAAGGGGCGAAGTTTTTGACAAGAAAGGTTCAGATCTTTGAGCAACTGGCT GGTGAATCTGAGAACCAA TTAGTCGCTTCCAGTGGAGAACTAAAGTTGTTGGAAGAGCGTGGTTCAACAAGAGGCAGCTTCATCAGCAGAAAAGGAGAACCTGCTTGAAGAACCAACGAACAGTGTGGAGGCGTACAAAGAAAAGATCAATGAGTTGCCAGCATCTCTGGATTCCCCGACGTCTAAAAATCAGCTGCTTGAACAAGAAGTCAAGGACCTGTCTGACAAGTTTACAGAGCATCAAGAACAAGCTCATTCGGTTCACGAAAGAAGTCTTGAACTGGAGAGCCTGCTTCATACATCGAAGTTTGATGCTGAAGTTGCCCACACCCGGACACAGGATCTTGAAAATGAGCTGACCCCTGCAAATGAAAAGTTCAAGGAGGTTGAAGCAGACCTAGAACAGTACAGGAGCAAGGTTTTTCAGCTTTCCGATGAACTAGAAGCATTCCAGACAAAAGCAGCTAGTCTTGAAGCTGTGATGGAATCTGCAAGCGAAAAGGAGAAAGAGCTTGTGGAGTCTCTGGGTCAAATTTCTGAAAAAAAAAAAA                                                                                                                                            ]
[+] EMBL AU085909             [                                                                                                                   AACT GCTCGNTGAATCTGAG ACCAATTTAGTCGCTTCCAGTGGAGAACTAAAGTTGTTGGAAGAGCGT GTTCAACAAGAGGCAGCTTCATCAGCAGAAAAGGAGAAGCTGCTTGAAGAAGCAACGAACAGTGTGGAGGCGTACAAAGAAAAGATCAATGAGTTGCAAGCATCTCTGGATTCCACGACGTCTAAAAATCAGCTGCTTGAACAAGAAGTCAAGGACCTGTCTGACAAGTTTACAGAGCATCAAGAAC AGCTCATTCGGTTCACGAAAGAAGTCTTGAACTGGAGANCCTGCTTCATACATCGAAGTCTGATGCTGAA TTGCACACACCCGGACACAGGATCTTGAAAATGAGCTGAACACTGCAAATGAAAAGTTCAAGGAGGTTGAAGCAGACCTAGAACAGTACAGGAGCAAGGTTTCTCAGCTTTCCGATGAACTAGAAGCATACCAGACAAAAGCAGCTAGTCTTGAAGCTGTGATGGAATCTGCAAGCGAAAAGGAGAAAGAGCTTGTGGAATCTCTGGGTCAAATTACTGAAGAAAAGAAGAAACTTGAACTACTAGTATTGGAGTATGAAGAGAAGACCGAAGAATACTTAAAGGAAAAACAATCTTTGGAAGAGAGGTTGCAGAGCCAAGAATCCAAGGTGCTGGCTTTAGAGGAATCGTTGGTGAAAATGGGAGAAAAA]
[+] EMBL AU097377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    tnanCTTTCCGNTGTACTAGAAGCATNCCAGACNAAAGCAGCTAGTCNTGAAGCTGTGATGGAATCTGCAAGCGAAAAGGAGAAAGAGNTTGTGGAATCTCTGGGTCAAATTACTGAAAAAAAAAAAAAAaaaaa                                                                                                                                     ]


>consensus_4974#0 CGGCATGCTGCCCGGCCCTTTCATGCTTTCTGAAAAGGCCTTTGCAGTTCCACGCTAGAA GAGGGTTTAGGCCAAGGGGCGAAGTTTTTGACAAGAAAGGTTCAGATCTTTGAGCAACTG GCTGGTGAATCTGAGAACCAATTAGTCGCTTCCAGTGGAGAACTAAAGTTGTTGGAAGAG CGTGGTTCAACAAGAGGCAGCTTCATCAGCAGAAAAGGAGAACCTGCTTGAAGAACCAAC GAACAGTGTGGAGGCGTACAAAGAAAAGATCAATGAGTTGCCAGCATCTCTGGATTCCCC GACGTCTAAAAATCAGCTGCTTGAACAAGAAGTCAAGGACCTGTCTGACAAGTTTACAGA GCATCAAGAACAAGCTCATTCGGTTCACGAAAGAAGTCTTGAACTGGAGAGCCTGCTTCA TACATCGAAGTTTGATGCTGAAGTTGCCCACACCCGGACACAGGATCTTGAAAATGAGCT GACCCCTGCAAATGAAAAGTTCAAGGAGGTTGAAGCAGACCTAGAACAGTACAGGAGCAA GGTTTTTCAGCTTTCCGATGAACTAGAAGCATACCAGACAAAAGCAGCTAGTCTTGAAGC TGTGATGGAATCTGCAAGCGAAAAGGAGAAAGAGCTTGTGGAATCTCTGGGTCAAATTAC TGAAAAAAAAAAAAAACTTGAACTACTAGTATTGGAGTATGAAGAGAAGACCGAAGAATA CTTAAAGGAAAAACAATCTTTGGAAGAGAGGTTGCAGAGCCAAGAATCCAAGGTGCTGGC TTTAGAGGAATCGTTGGTGAAAATGGGAGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)