cluster # 5031

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Oryza sativa
cluster # 5031 cluster # 5031 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5031#0 length = 3068 sequences # 3
consensusID : consensus_5031#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3068
fasta sequence
                              [CTCGACCTTCTTTCGTCGGCCAAGACACGGCCAGTAGTTTTATTATCAGCTAGCGTAGCTTGGTGCCATTTGAGTTGAGAGTAGCACTTTGTCTGAGATTATGGAAGGACCTGTGAGCGCGTCGATGGGTGTCATGGTCCCTTTGCTGTCCAAGCTCATCGAGAGCATGGAACAGCCGAGGTTCAAGGACCTGAAGAACGACTTGAAGTCCCTCAGGGCCGAGCTCGCATCCATGGAAGCTGTAATGCTCAAGTTCGCCACGCAGGACGACACTGACCTGCAGGTGAAGGAGTGGATGAGGCAGGTGCGGGAAGTGGGCTACGACACCGATGACTGGATCGACAGCCACCCTCTGGTGGCTGCGGAGACGAAGGGGTCACGCATCTTCAGCCGGAACAACCGGCGGAGGAAGCTCGCTGAGCTGATAAAGGAGCTCAAGGACCGCGTCGAGGATGCCAGCCAAAGGCGGACCAGGTACATGCTCCAGAGCGCCCCTGTCGTGGACGACGTCACCGACGACCTCCGCCCCAGCAACGTCACCGTCGACCCTCAGCTTCTGTACGGTGTTAGCCGTAGGCTGGTTGGACTGGATGAGCCTATGGAGGAGCTCGCCCGCGAACTGAGGCCTGGCGGCGGCGCGCAGCAGCACTTCAAGGTGGTGTCCATCGTCGGAGGCGGTGGCCTTGGCATGACCACGCTCGCCAAGGAGGTGTACCGAAAGATCCACGGCGAATTTGTCTCTTGTGCATTCGTCACTGTCGGCCAGAACCCGCATATTCCGACGGTTCTGCTCAACATGCTCCGCCAGCTCAACCCCCTGCAGCCGCAAGGGGATGACACTGAGCAACAGATGGATGAACCCACAGTAGTCGGCAAGATCAGGGAGTTCCTCGACAAAAAGAGGTACTTTATCACCATTGACGATATATGGAGTATATCTGCTTGGAAGGACATCAAATACGCTCTACCCGAGAATACTCCTGGAAGTAGAATAGTGGCCACGACACGTATCAGCGATGTAGCGAAATCGTGTTCCGTCCGCCCCACGGATTTCACCTATCCGATGAAGCATCTTAGCAAGACTGACTCCAAGCAACTGTTTCTCGGCAGACTGCAGTCTCCTAAGAAAATTTACTCTTCTGAGACTGACCTGGAAGAAGGGGTTTTCCATGATGTTTGGAACATATGCGGCGGCATGCCATTAGCGATGATCGTCATTGCCGGTATGCTGAACAGGAAATCGCCAGGCTGCCCTGAGGACAATAAAAGCATCAAGAAAGCACTGGAGAAACACCCGACGTTGCAAGGGATGAGGAGGATACTACGCATCTGTTACTCTGATCTCTCTTTACCCGTGAGAACTTGCTTGCTGTATCTGAGCATCTTCCGGCCGGAGGATGAAACGGTGGAGAAGAACCGGCTGATATGGAGGTGGATAGCCGAAAGGTTCATCCCAGTCCTAAAGCAGGAGCAGGTCACGTTATGGGAGACGGCCGAGAGCTACTTCAACGAGCTCGTCAACCGACAGCTGATCCAGCCGGTGGAGGCGGGGGACGTCGTGAAGGTGAAGGTGCACGACGTGGTCCTCGAGTTCATCGCGTCTGTCGCTGCCGAGGAGAACTTCGTCACCTCGGACATGGTGCTGCGTTGCAAGCCACGTGACATCGTCCGGCGGGCCTCCCTCAACTGCATCGACGACGACGAGAGCACCGGAGGCCTGTCTCAGGTCCGTTCGCTGACGGTGTTCGGCGTCCTCGCCGAGCCCATGAAATCGAGCATCGTCTACTTGCAGCTGCTGCGAGTGCTCGACTTCAAAGACGCCAAGGGGCTGAAAGATGAAGATGTACAAGGTCTCGAGAGGCTCTTCTTCCTCAAGTACCTTGGGCTCGGCGGCAAGTTCGTCACAAAGCTCCCAGAGAAGTGGAAGGAGCTCCAGAACTTGGAAGCCCTGGATGTGAGGGAGACCGCCGTCAAGGAGCTTCCAGAGGCGATCGCCCGGCGGTGTAGCAAGCTGGCGTGCCTGCTCGCCCGTCGCCTCGCCGTCGGGGAGGGGATGCACAGCTTGCTGCACCTGCAGGAGCTGTCTATGGTGAGCGTCACCGATGCGGCCTCGCTGGACCGCATGACTAATCTGGTGGTGGGCCTGACCAAGCTGAGGAAGCTTGGCGTGAGTTTGTTTTTCGACGCCACGGGCGACCAGCACCAGCACGCCGTGGCCGCCGCTGCTCCCGACGACGCCAAGCTCGCCGCCTCCCTCGAGCGGATCGAGAAATGCGGCGTCGAGTCGCTCCTCCTGGACGTCGTCGGCGAGGGCAAGACGCGCGCGGCGCTGGATCAGCTCGTGGAGAAGTGGGCACTGCCGCGTCGCCTGCAGAAATTCACCATGAGGAGCGAGCACTACTACTTCCCCAAGGCGCCGCCCAAGATGGCCCCTCACGAATCCCTCTCCCACCTCGAGATCTCCATAGCCGAGCTAAGGAAGAGCGACGTCGGCGTGCTCTGCACCATGCCTTCCCTCTTCTACCTCAAGTTGAGCACAAGATCGTCTCCGCTGGAGGCGGATCAGACGGTGGTCATCACCAACGTGGGATTCCAGTGCCTCCAGGTGTTCTGGTTCAAGTGCCAGGACGGCGGCCTGGGGTTCGACTTCGGAGACGGAGCCATGGCCCAGCTTCTGAAGCTTGATCTCCACTTCAAGCAGGCGAAGAAGCCCAAGCTTACCGGCATCAGCAACCTCTCTTCGCTCCGGCAATTCCACGCCACCGTCTGCTGCGGTAAAGATGATTCAGAATTTAAGGCTACAGAAGAAAACATCAAGCAAATCGTATCAAATC-ACTCCAAGAATCCCACCTGGGAGGTCACCATGGAGATGGAGATCGA-CAAGCCTACT-GCAGCCATCTCAATTTGATGGATGCTACCAAAACTCAAGGTACCAACATCAACACGACAGTCGCTACTCGCTACTCCAATCAATTTGATGACTGCTTCCTTAATTCAGCCTGCTTTTTCCTTCACCGCCCTTAATTTCTTTGGCAATTCAAACATGTTGTCGATCTACACCATGACAC]

[+] EMBL AK110307             [CTCGACCTTCTTTCGTCGGCCAAGACACGGCCAGTAGTTTTATTATCAGCTAGCGTAGCTTGGTGCCATTTGAGTTGAGAGTAGCACTTTGTCTGAGATTATGGAAGGACCTGTGAGCGCGTCGATGGGTGTCATGGTCCCTTTGCTGTCCAAGCTCATCGAGAGCATGGAACAGCCGAGGTTCAAGGACCTGAAGAACGACTTGAAGTCCCTCAGGGCCGAGCTCGCATCCATGGAAGCTGTAATGCTCAAGTTCGCCACGCAGGACGACACTGACCTGCAGGTGAAGGAGTGGATGAGGCAGGTGCGGGAAGTGGGCTACGACACCGATGACTGGATCGACAGCCACCCTCTGGTGGCTGCGGAGACGAAGGGGTCACGCATCTTCAGCCGGAACAACCGGCGGAGGAAGCTCGCTGAGCTGATAAAGGAGCTCAAGGACCGCGTCGAGGATGCCAGCCAAAGGCGGACCAGGTACATGCTCCAGAGCGCCCCTGTCGTGGACGACGTCACCGACGACCTCCGCCCCAGCAACGTCACCGTCGACCCTCAGCTTCTGTACGGTGTTAGCCGTAGGCTGGTTGGACTGGATGAGCCTATGGAGGAGCTCGCCCGCGAACTGAGGCCTGGCGGCGGCGCGCAGCAGCACTTCAAGGTGGTGTCCATCGTCGGAGGCGGTGGCCTTGGCATGACCACGCTCGCCAAGGAGGTGTACCGAAAGATCCACGGCGAATTTGTCTCTTGTGCATTCGTCACTGTCGGCCAGAACCCGCATATTCCGACGGTTCTGCTCAACATGCTCCGCCAGCTCAACCCCCTGCAGCCGCAAGGGGATGACACTGAGCAACAGATGGATGAACCCACAGTAGTCGGCAAGATCAGGGAGTTCCTCGACAAAAAGAGGTACTTTATCACCATTGACGATATATGGAGTATATCTGCTTGGAAGGACATCAAATACGCTCTACCCGAGAATACTCCTGGAAGTAGAATAGTGGCCACGACACGTATCAGCGATGTAGCGAAATCGTGTTCCGTCCGCCCCACGGATTTCACCTATCCGATGAAGCATCTTAGCAAGACTGACTCCAAGCAACTGTTTCTCGGCAGACTGCAGTCTCCTAAGAAAATTTACTCTTCTGAGACTGACCTGGAAGAAGGGGTTTTCCATGATGTTTGGAACATATGCGGCGGCATGCCATTAGCGATGATCGTCATTGCCGGTATGCTGAACAGGAAATCGCCAGGCTGCCCTGAGGACAATAAAAGCATCAAGAAAGCACTGGAGAAACACCCGACGTTGCAAGGGATGAGGAGGATACTACGCATCTGTTACTCTGATCTCTCTTTACCCGTGAGAACTTGCTTGCTGTATCTGAGCATCTTCCGGCCGGAGGATGAAACGGTGGAGAAGAACCGGCTGATATGGAGGTGGATAGCCGAAAGGTTCATCCCAGTCCTAAAGCAGGAGCAGGTCACGTTATGGGAGACGGCCGAGAGCTACTTCAACGAGCTCGTCAACCGACAGCTGATCCAGCCGGTGGAGGCGGGGGACGTCGTGAAGGTGAAGGTGCACGACGTGGTCCTCGAGTTCATCGCGTCTGTCGCTGCCGAGGAGAACTTCGTCACCTCGGACATGGTGCTGCGTTGCAAGCCACGTGACATCGTCCGGCGGGCCTCCCTCAACTGCATCGACGACGACGAGAGCACCGGAGGCCTGTCTCAGGTCCGTTCGCTGACGGTGTTCGGCGTCCTCGCCGAGCCCATGAAATCGAGCATCGTCTACTTGCAGCTGCTGCGAGTGCTCGACTTCAAAGACGCCAAGGGGCTGAAAGATGAAGATGTACAAGGTCTCGAGAGGCTCTTCTTCCTCAAGTACCTTGGGCTCGGCGGCAAGTTCGTCACAAAGCTCCCAGAGAAGTGGAAGGAGCTCCAGAACTTGGAAGCCCTGGATGTGAGGGAGACCGCCGTCAAGGAGCTTCCAGAGGCGATCGCCCGGCGGTGTAGCAAGCTGGCGTGCCTGCTCGCCCGTCGCCTCGCCGTCGGGGAGGGGATGCACAGCTTGCTGCACCTGCAGGAGCTGTCTATGGTGAGCGTCACCGATGCGGCCTCGCTGGACCGCATGACTAATCTGGTGGTGGGCCTGACCAAGCTGAGGAAGCTTGGCGTGAGTTTGTTTTTCGACGCCACGGGCGACCAGCACCAGCACGCCGTGGCCGCCGCTGCTCCCGACGACGCCAAGCTCGCCGCCTCCCTCGAGCGGATCGAGAAATGCGGCGTCGAGTCGCTCCTCCTGGACGTCGTCGGCGAGGGCAAGACGCGCGCGGCGCTGGATCAGCTCGTGGAGAAGTGGGCACTGCCGCGTCGCCTGCAGAAATTCACCATGAGGAGCGAGCACTACTACTTCCCCAAGGCGCCGCCCAAGATGGCCCCTCACGAATCCCTCTCCCACCTCGAGATCTCCATAGCCGAGCTAAGGAAGAGCGACGTCGGCGTGCTCTGCACCATGCCTTCCCTCTTCTACCTCAAGTTGAGCACAAGATCGTCTCCGCTGGAGGCGGATCAGACGGTGGTCATCACCAACGTGGGATTCCAGTGCCTCCAGGTGTTCTGGTTCAAGTGCCAGGACGGCGGCCTGGGGTTCGACTTCGGAGACGGAGCCATGGCCCAGCTTCTGAAGCTTGATCTCCACTTCAAGCAGGCGAAGAAGCCCAAGCTTACCGGCATCAGCAACCTCTCTTCGCTCCGGCAATTCCACGCCACCGTCTGCTGCGGTAAAGATGATTCAGAATTTAAGGCTACAGAAGAAAACATCAAGCAAATCGTATCAAATC ACTCCAAGAATCCCACCTGGGAGGTCACCATGGAGATGGAGATCGA CAAGCCTACT GCAGCCATCTCAATTTGATGGATGCTACCAAAACTCAAGGTACCAACATCAACACGACAGTCGCTACTCGCTACTCCAATCAATTTGATGACTGCTTCCTTAATTCAGCCTGCTTTTTCCTTCACCGCCCTTAATTTCTTTGGCAATTCAAACATGTTGTCGATCTACACCATGACAC]
[+] EMBL OSS3295A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTCGCTGCCGAGGAGAACTTCGTCACCTCGGACATGGTGCTGCGTTGCAAGCCACGTGACATCGTCCGGCGGGCCTCCCTCAACTGCATCGACGACGACGAGAGCACCGGAGGCCTGTCTCAGGTCCGTTCGCTGACGGTGTTCGGCGTCCTC NCGAGCCCATGAAATCGAGCATCGTCTACTTGCAGCTGCTGCGAGTGCTCGACTTCAAAGACGCCAAGGGGCTGAAAGATGAAGATGTACAAGGTCTCGAGAGGNTCTTCTTCCTCAAGTACCTTGGGCTCGGCGGCAAGTTCGTCACAAAGCTCCCAGAGAAGTGGAAGNAGCTNCAGAACTTGGAAGNCCTGGATGTGAGGGAGACCGCCGTCAAGGAGCTTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU086043             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTTATTCAATCNACTCCAAGAATCCCACCT GGAGGTCACCATGGAGATGGAGATCGANCAAG CTACTNGCAGCCATCTCAATTTGATGGATGCTACCAAAACTCAAGGTACCAACATCAACACGACAGTCGCTACTCGCTACTCCAATCAATTTGATGACTGCTTCCTTAATTCAGCCTGCTTTTTCCTTCACCGCCCTTAATTTCTTTGGCAATTCAAACATGTTGTCGATCTACACCATGACAC]




>consensus_5031#0
CTCGACCTTCTTTCGTCGGCCAAGACACGGCCAGTAGTTTTATTATCAGCTAGCGTAGCT
TGGTGCCATTTGAGTTGAGAGTAGCACTTTGTCTGAGATTATGGAAGGACCTGTGAGCGC
GTCGATGGGTGTCATGGTCCCTTTGCTGTCCAAGCTCATCGAGAGCATGGAACAGCCGAG
GTTCAAGGACCTGAAGAACGACTTGAAGTCCCTCAGGGCCGAGCTCGCATCCATGGAAGC
TGTAATGCTCAAGTTCGCCACGCAGGACGACACTGACCTGCAGGTGAAGGAGTGGATGAG
GCAGGTGCGGGAAGTGGGCTACGACACCGATGACTGGATCGACAGCCACCCTCTGGTGGC
TGCGGAGACGAAGGGGTCACGCATCTTCAGCCGGAACAACCGGCGGAGGAAGCTCGCTGA
GCTGATAAAGGAGCTCAAGGACCGCGTCGAGGATGCCAGCCAAAGGCGGACCAGGTACAT
GCTCCAGAGCGCCCCTGTCGTGGACGACGTCACCGACGACCTCCGCCCCAGCAACGTCAC
CGTCGACCCTCAGCTTCTGTACGGTGTTAGCCGTAGGCTGGTTGGACTGGATGAGCCTAT
GGAGGAGCTCGCCCGCGAACTGAGGCCTGGCGGCGGCGCGCAGCAGCACTTCAAGGTGGT
GTCCATCGTCGGAGGCGGTGGCCTTGGCATGACCACGCTCGCCAAGGAGGTGTACCGAAA
GATCCACGGCGAATTTGTCTCTTGTGCATTCGTCACTGTCGGCCAGAACCCGCATATTCC
GACGGTTCTGCTCAACATGCTCCGCCAGCTCAACCCCCTGCAGCCGCAAGGGGATGACAC
TGAGCAACAGATGGATGAACCCACAGTAGTCGGCAAGATCAGGGAGTTCCTCGACAAAAA
GAGGTACTTTATCACCATTGACGATATATGGAGTATATCTGCTTGGAAGGACATCAAATA
CGCTCTACCCGAGAATACTCCTGGAAGTAGAATAGTGGCCACGACACGTATCAGCGATGT
AGCGAAATCGTGTTCCGTCCGCCCCACGGATTTCACCTATCCGATGAAGCATCTTAGCAA
GACTGACTCCAAGCAACTGTTTCTCGGCAGACTGCAGTCTCCTAAGAAAATTTACTCTTC
TGAGACTGACCTGGAAGAAGGGGTTTTCCATGATGTTTGGAACATATGCGGCGGCATGCC
ATTAGCGATGATCGTCATTGCCGGTATGCTGAACAGGAAATCGCCAGGCTGCCCTGAGGA
CAATAAAAGCATCAAGAAAGCACTGGAGAAACACCCGACGTTGCAAGGGATGAGGAGGAT
ACTACGCATCTGTTACTCTGATCTCTCTTTACCCGTGAGAACTTGCTTGCTGTATCTGAG
CATCTTCCGGCCGGAGGATGAAACGGTGGAGAAGAACCGGCTGATATGGAGGTGGATAGC
CGAAAGGTTCATCCCAGTCCTAAAGCAGGAGCAGGTCACGTTATGGGAGACGGCCGAGAG
CTACTTCAACGAGCTCGTCAACCGACAGCTGATCCAGCCGGTGGAGGCGGGGGACGTCGT
GAAGGTGAAGGTGCACGACGTGGTCCTCGAGTTCATCGCGTCTGTCGCTGCCGAGGAGAA
CTTCGTCACCTCGGACATGGTGCTGCGTTGCAAGCCACGTGACATCGTCCGGCGGGCCTC
CCTCAACTGCATCGACGACGACGAGAGCACCGGAGGCCTGTCTCAGGTCCGTTCGCTGAC
GGTGTTCGGCGTCCTCGCCGAGCCCATGAAATCGAGCATCGTCTACTTGCAGCTGCTGCG
AGTGCTCGACTTCAAAGACGCCAAGGGGCTGAAAGATGAAGATGTACAAGGTCTCGAGAG
GCTCTTCTTCCTCAAGTACCTTGGGCTCGGCGGCAAGTTCGTCACAAAGCTCCCAGAGAA
GTGGAAGGAGCTCCAGAACTTGGAAGCCCTGGATGTGAGGGAGACCGCCGTCAAGGAGCT
TCCAGAGGCGATCGCCCGGCGGTGTAGCAAGCTGGCGTGCCTGCTCGCCCGTCGCCTCGC
CGTCGGGGAGGGGATGCACAGCTTGCTGCACCTGCAGGAGCTGTCTATGGTGAGCGTCAC
CGATGCGGCCTCGCTGGACCGCATGACTAATCTGGTGGTGGGCCTGACCAAGCTGAGGAA
GCTTGGCGTGAGTTTGTTTTTCGACGCCACGGGCGACCAGCACCAGCACGCCGTGGCCGC
CGCTGCTCCCGACGACGCCAAGCTCGCCGCCTCCCTCGAGCGGATCGAGAAATGCGGCGT
CGAGTCGCTCCTCCTGGACGTCGTCGGCGAGGGCAAGACGCGCGCGGCGCTGGATCAGCT
CGTGGAGAAGTGGGCACTGCCGCGTCGCCTGCAGAAATTCACCATGAGGAGCGAGCACTA
CTACTTCCCCAAGGCGCCGCCCAAGATGGCCCCTCACGAATCCCTCTCCCACCTCGAGAT
CTCCATAGCCGAGCTAAGGAAGAGCGACGTCGGCGTGCTCTGCACCATGCCTTCCCTCTT
CTACCTCAAGTTGAGCACAAGATCGTCTCCGCTGGAGGCGGATCAGACGGTGGTCATCAC
CAACGTGGGATTCCAGTGCCTCCAGGTGTTCTGGTTCAAGTGCCAGGACGGCGGCCTGGG
GTTCGACTTCGGAGACGGAGCCATGGCCCAGCTTCTGAAGCTTGATCTCCACTTCAAGCA
GGCGAAGAAGCCCAAGCTTACCGGCATCAGCAACCTCTCTTCGCTCCGGCAATTCCACGC
CACCGTCTGCTGCGGTAAAGATGATTCAGAATTTAAGGCTACAGAAGAAAACATCAAGCA
AATCGTATCAAATCACTCCAAGAATCCCACCTGGGAGGTCACCATGGAGATGGAGATCGA
CAAGCCTACTGCAGCCATCTCAATTTGATGGATGCTACCAAAACTCAAGGTACCAACATC
AACACGACAGTCGCTACTCGCTACTCCAATCAATTTGATGACTGCTTCCTTAATTCAGCC
TGCTTTTTCCTTCACCGCCCTTAATTTCTTTGGCAATTCAAACATGTTGTCGATCTACAC
CATGACAC
clustalw multiple alignements is not computed in this case