These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5110#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2375 fasta sequence [CTCTCCGCCGCCGCCGCCGCCTCGCTTCCTCGTCGCCGGCTCGCCGCGCCGGCGGCAGCATTGTGAGCCTCCCTCCCCTCCCTGTGGCTGTGCCTCCCCCGGTGGCCAGCCGCCGGCCTTTGGCAGTAGTCCCTGCGCGGCGGCGGGCCGGCGGCGAGGCTGGTCTGGACGCGGCGGAGGCGACTCCGTCCTTCCATCTCGGCTTCGAATCGAATTCGAAGAGAGAGAAAAATTTGGGGGGTTTGAGCTGAGCTGACCACCACGTCTAGGTCAGGTCCACCCCCCTGGCTGTTCAAGCTGTGGAGTGAGGAGATGCGTCTACTTTTGCCAAGGAATTAGCGAGGCATTGCCAGGTTTCCGATGGATAATAAGCATCATAAGAATGTTGAGGCAGGGAAAAGCTCATTCCACAGGATGGTTCTTGGGCAGCTTGTTGGGGAATTCGGTTTCGAGCGAGGAGAATGTTCCTTGCAATACTCCGAGAAGCTCGGTTCGCTCGCGGTTCGGTGCTTCGGCTAGCAGAATCGTCGCGTCTACTAGCGGTGCGTCAGTTAGCCCCGGTGAGTATGTCAGAGATCCTGGGTCCATATTGAGCCTGCAGCCTTGGATCTTTAAGAGGAGTGGCTCTCAGAAGAATGAGGAAAAGATGATGCTCGCAAGTGGTAGTAGGGTTGTTGGTGAAGGCAAGAATCTGATGGATTCCTTTCGAGATGGCTCGGCTGTTGAGGTCTCTCCAAGGAGCCCTGGTCTTGGTTCTGGACCTGGGAGAGGTCGAGGTGCTCTTAGGAGCAGACGGTCGCGTAGGCACTTGATTAGGCCACTCGTGCCGATGGAGAATTCCTACATTCCTCAACTTTATAGTGCAGATTTTGAAATTGATGAGTGCACGTTTGGGCCAGCTCCCTCCCCCGCTTCTGCTAGGCCGTTCATCGTAACAGATGGAAGGAGAGTCATTAGTAAGTCACGTTATCAACCAGTGCCTGTACCATTTCATATTGGATTTGAGAAGGAAGGGCGTCGAAACAGCTCAGAAATGGTGGAAAGTGTAATTGGGATTGCTCCTCTACCTGAGCTGAAGAAATCAAAAAGGGAGAGGCAGGGATCACACAATGGAGGGATGGGTTTGTCTGCTTTCGAGAGTAGTAAGCCATCAAAATCAACAGATTTACTTGCTCGACTGCGCATATTCTCTACTGGTGTCAGTATTGGTATTATATCATCCACTTTATCAAACAAGAATGAGCTTGATGCATTAAAGGGTACAGTGAAACGAATGGAGAACTTGATTCAAGATCTGCATGATGAGCTGGAGATGAGAGAGGGTTTAACTGTAAAGGAATTGCCTAATGAAATGTCTGTAAAAATTGATGATGATGAGAGCAAAGCTCATGTAACTGATTCAGAGCCCATGAGCAAAATCGAAGAAGAGCTTGAAGCTGAGCTTGCGAGATTGGAATTAAATATAACTTCAAACTGCTTGAAAGAACAAACATTTGACTTCAGTG---------AGGATCTCATTGGAGATATTGTCCAGGGAGAACTGAAGATCGATACAACCCATTGTGATCTTGCTGACCACAGCAGTGAGAGTGCCCATGGCAGGGATAGTAGAGAAAGCTCCCCAGATTACACACATGATGCAAACTATCCTGTCTCACCTAGGGATCTCAGCCTCCGTCTCCACAAGGTAATCCAACAGAGACTCGAGGAGCGAATCAAGGAACTTGAGACAACACTTGCCCAGAGTGAGATGCAGACGCAGGTGCAAGTGATGGCCACCGAGCAGATCTTGTGTGAAAGAACCTGCTCAGACAGTGATTCTGGTTCTCCCAACCAGGAAAGTCCAGTGTATATACAAGAAACTAACTCCTTGGTAGAACCGTTCTGTCTAAACCTAGCTGGAGACGCGCTAGAGGCTTACGATGAAGCTTATGAGGAATTCATGAGAATTGCGGACTCCCCTTGCACC-ACAAGTACCAACGGGAAGCCTCAAGTTCATGAAGATTACTCGGTGGACCGCAGCTTGATCTGGGGCTTGGAGGATGGCAGTGCAAGGAAGCTGAAAAAAGTGCCCACTTGGGAGCGAATTTTAAAGAGCAGAGAGCCTAACAGAACTCAGGAGAGTGACGGAGATG-ATGAAGATGAATTTGAAGATGATGACCA-GGATAGTAAGATGCTCATCCAACAGATTATAGAGAGAACTAAACAAGGCTCACCTGTACTAATTCATGCTCAAAGA--A--TTGTTTTCTGTGGATGATTAGATTGTTGGACTATATTGAATTAGAATTTAGTGCCAATTGATTGTTTAGAGAAAAAAACATAATATTATTCTTTTCATCATCTTCCGGTGATACAATTTTTCAATGTGTGTTATAAAA] [+] EMBL AK068258 [CTCTCCGCCGCCGCCGCCGCCTCGCTTCCTCGTCGCCGGCTCGCCGCGCCGGCGGCAGCATTGTGAGCCTCCCTCCCCTCCCTGTGGCTGTGCCTCCCCCGGTGGCCAGCCGCCGGCCTTTGGCAGTAGTCCCTGCGCGGCGGCGGGCCGGCGGCGAGGCTGGTCTGGACGCGGCGGAGGCGACTCCGTCCTTCCATCTCGGCTTCGAATCGAATTCGAAGAGAGAGAAAAATTTGGGGGGTTTGAGCTGAGCTGACCACCACGTCTAGGTCAGGTCCACCCCCCTGGCTGTTCAAGCTGTGGAGTGAGGAGATGCGTCTACTTTTGCCAAGGAATTAGCGAGGCATTGCCAGGTTTCCGATGGATAATAAGCATCATAAGAATGTTGAGGCAGGGAAAAGCTCATTCCACAGGATGGTTCTTGGGCAGCTTGTTGGGGAATTCGGTTTCGAGCGAGGAGAATGTTCCTTGCAATACTCCGAGAAGCTCGGTTCGCTCGCGGTTCGGTGCTTCGGCTAGCAGAATCGTCGCGTCTACTAGCGGTGCGTCAGTTAGCCCCGGTGAGTATGTCAGAGATCCTGGGTCCATATTGAGCCTGCAGCCTTGGATCTTTAAGAGGAGTGGCTCTCAGAAGAATGAGGAAAAGATGATGCTCGCAAGTGGTAGTAGGGTTGTTGGTGAAGGCAAGAATCTGATGGATTCCTTTCGAGATGGCTCGGCTGTTGAGGTCTCTCCAAGGAGCCCTGGTCTTGGTTCTGGACCTGGGAGAGGTCGAGGTGCTCTTAGGAGCAGACGGTCGCGTAGGCACTTGATTAGGCCACTCGTGCCGATGGAGAATTCCTACATTCCTCAACTTTATAGTGCAGATTTTGAAATTGATGAGTGCACGTTTGGGCCAGCTCCCTCCCCCGCTTCTGCTAGGCCGTTCATCGTAACAGATGGAAGGAGAGTCATTAGTAAGTCACGTTATCAACCAGTGCCTGTACCATTTCATATTGGATTTGAGAAGGAAGGGCGTCGAAACAGCTCAGAAATGGTGGAAAGTGTAATTGGGATTGCTCCTCTACCTGAGCTGAAGAAATCAAAAAGGGAGAGGCAGGGATCACACAATGGAGGGATGGGTTTGTCTGCTTTCGAGAGTAGTAAGCCATCAAAATCAACAGATTTACTTGCTCGACTGCGCATATTCTCTACTGGTGTCAGTATTGGTATTATATCATCCACTTTATCAAACAAGAATGAGCTTGATGCATTAAAGGGTACAGTGAAACGAATGGAGAACTTGATTCAAGATCTGCATGATGAGCTGGAGATGAGAGAGGGTTTAACTGTAAAGGAATTGCCTAATGAAATGTCTGTAAAAATTGATGATGATGAGAGCAAAGCTCATGTAACTGATTCAGAGCCCATGAGCAAAATCGAAGAAGAGCTTGAAGCTGAGCTTGCGAGATTGGAATTAAATATAACTTCAAACTGCTTGAAAGAACAAACATTTGACTTCAGTG AGGATCTCATTGGAGATATTGTCCAGGGAGAACTGAAGATCGATACAACCCATTGTGATCTTGCTGACCACAGCAGTGAGAGTGCCCATGGCAGGGATAGTAGAGAAAGCTCCCCAGATTACACACATGATGCAAACTATCCTGTCTCACCTAGGGATCTCAGCCTCCGTCTCCACAAGGTAATCCAACAGAGACTCGAGGAGCGAATCAAGGAACTTGAGACAACACTTGCCCAGAGTGAGATGCAGACGCAGGTGCAAGTGATGGCCACCGAGCAGATCTTGTGTGAAAGAACCTGCTCAGACAGTGATTCTGGTTCTCCCAACCAGGAAAGTCCAGTGTATATACAAGAAACTAACTCCTTGGTAGAACCGTTCTGTCTAAACCTAGCTGGAGACGCGCTAGAGGCTTACGATGAAGCTTATGAGGAATTCATGAGAATTGCGGACTCCCCTTGCACC ACAAGTACCAACGGGAAGCCTCAAGTTCATGAAGATTACTCGGTGGACCGCAGCTTGATCTGGGGCTTGGAGGATGGCAGTGCAAGGAAGCTGAAAAAAGTGCCCACTTGGGAGCGAATTTTAAAGAGCAGAGAGCCTAACAGAACTCAGGAGAGTGACGGAGATG ATGAAGATGAATTTGAAGATGATGACCA GGATAGTAAGATGCTCATCCAACAGATTATAGAGAGAACTAAACAAGGCTCACCTGTACTAATTCATGCTCAAAGA A TTGTTTTCTGTGGATGATTAGATTGTTGGACTATATTGAATTAGAATTTAGTGCCAATTGATTGTTTAGAGAAAAAAACATAATATTATTCTTTTCATCA ] [+] EMBL AK058735 [ TGGGCCAGCTCCCTCCCCCGCTTCTGCTAGGCCGTTCATCGTAACAGATGGAAGGAGAGTCATTAGTAAGTCACGTTATCAACCAGTGCCTGTACCATTTCATATTGGATTTGAGAAGGAAGGGCGTCGAAACAGCTCAGAAATGGTGGAAAGTGTAATTGGGATTGCTCCTCTACCTGAGCTGAAGAAATCAAAAAGGGAGAGGCAGGGATCACACAATGGAGGGATGGGTTTGTCTGCTTTCGAGAGTAGTAAGCCATCAAAATCAACAGATTTACTTGCTCGACTGCGCATATTCTCTACTGGTGTCAGTATTGGTATTATATCATCCACTTTATCAAACAAGAATGAGCTTGATGCATTAAAGGGTACAGTGAAACGAATGGAGAACTTGATTCAAGATCTGCATGATGAGCTGGAGATGAGAGAGGGTTTAACTGTAAAGGAATTGCCTAATGAAATGTCTGTAAAAATTGATGATGATGAGAGCAAAGCTCATGTAACTGATTCAGAGCCCATGAGCAAAATCGAAGAAGAGCTTGAAGCTGAGCTTGCGAGATTGGAATTAAATATAACTTCAAACTGCTTGAAAGAACAAACATTTGACTTCAGTGAGGTTGAACAGGATCTCATTGGAGATATTGTCCAGGGAGAACTGAAGATCGATACAACCCATTGTGATCTTGCTGACCACAGCAGTGAGAGTGCCCATGGCAGGGATAGTAGAGAAAGCTCCCCAGATTACACACATGATGCAAACTATCCTGTCTCACCTAGGGATCTCAGCCTCCGTCTCCACAAGGTAATCCAACAGAGACTCGAGGAGCGAATCAAGGAACTTGAGACAACACTTGCCCAGAGTGAGATGCAGACGCAGGTGCAAGTGATGGCCACCGAGCAGATCTTGTGTGAAAGAACCTGCTCAGACAGTGATTCTGGTTCTCCCAACCAGGAAAGTCCAGTGTATATACAAGAAACTAACTCCTTGGTAGAACCGTTCTGTCTAAACCTAGCTGGAGACGCGCTAGAGGCTTACGATGAAGCTTATGAGGAATTCATGAGAATTGCGGACTCCCCTTGCACC ACAAGTACCAACGGGAAGCCTCAAGTTCATGAAGATTACTCGGTGGACCGCGGCTTGATCTGGGGCTTGGAGGATGGCAGTGCAAGGAAGCTGAAAAAAGTGCCCACTTGGGAGCGAATTTTAAAGAGCAGAGAGCCTAACAGAACTCAGGAGAGTGACGGAGATG ATGAAGATGAATTTGAAGATGATGACCA GGATAGTAAGATGCTCATCCAACAGATTATAGAGAGAACTAAACAAGGCTCACCTGTACTAATTCATGCTCAAAGA ATGTTGTTTTCTGTGGATGATTAGATTGTTGGACTATATTGAATTAGAATTTAGTGCCAATTGATTGTTTAGAGAAAAAAACATAATATTATTCTTTTCATCATCTTCCGGTGATACAATTTTTCAATGTGTGT ] [+] EMBL BM421349 [ ATGAAGCTTATGAGGAATTCATGAGAATT CGGACTCCCCTTGCACCAACAAGTACCAACGGGAAGCCTCAAGTTCATGAAGATTACTC GTGGACCACAGCTTGATCTGGGGCTTGGAGGATGCAAGTGCAAGGAAGCTGAAAAAAGTGCCCACTTGGGAGCGAATTTTAAAGA CAGAGAGCCTAACAGAACTCAGGAGAGTGACGGAGATGTATGAAGATGAATTTGAAGATGATGACCACGGATAGTAAGATGCTCATCC CCAGATTATAGAGAGAACTAAACAAGGCTCACCTGTACTAATTCATGCTCAAAGAATA TTGTTTTCTGTGGATGATTAGATTGTTGGACTATATTGAATTAGAATTTAGT CC ATTGATTGTTTAGAGAAAAAAACATAATATTATTCTTTTCATCATCTTCCGGTGATAC ATTTTCCAACGTGTGTTATAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||