cluster # 5159

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Oryza sativa
cluster # 5159 cluster # 5159 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5159#0 length = 448 sequences # 3

consensusID : consensus_5159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 448
fasta sequence

                              [GTAGCCACCGGTGCGTCCTCTCTTCCCTCTTCCTTCACCCTTCATGCTCGATCCAGATGGGGGCGGGAGAACCGGATGGGAGCGTCAGTTATGGGGATGG-CNTTGA-GGAGAGAT-AAA-CGCCCAAA-TTTGG-C-ATTTC-TC-TCTCCCGTG-TTT--GGCAAT-CCGCCAC-TTTTGGCGCATTGGAT-GG-CGCTTCTCAT-GGAA-CCTTTTTTTTCT-CCTATACG-CCAAAATG-CCGATGG-NGTATCGGATAGATGAGCTCCT-GGGGATGCTGTAAGTCAGTTGATGTAT-CCTTCACCGGTTGTTTGTA-GGTATCTTATAATGTGTCCTTGAGAAAAATATTGACAGATCCAACTATGAACAAGCAGTGGTTTGAAAGAACATCTCTATCAAATCTCAGGGCTCCATTGAAAAAAATATCATGGAATTAAAATTGATTATCATGTTCCAAAGAAAAAAA]

[+] EMBL AU091953             [GTAGCCACCGGTGCGTCCTCTCTTCCCTCTTCCTTCACCCTTCATGCTCGATCCAGATGGGGGCGGGAGAACCGGATGGGAGCGTCAGTTATGGGGATGG C GTGA GGAGAGAT AAA CG CCAAA TTTGG C ATTTC TC TCT CCGTG TTT  GGCAAT CCGCCAC TTTTGGCGCATTGGAT GG CGCTTCTCAT GGAA CCTTTTTTTTCT CCTATACG CCAAAATG CCGATGG NGTATCGGATAGATGAGCTCCT GGGGATGCTGTAAGTCAGTTGATGTAT CCTTCACCGGTTGTTTGTA GGTATCTTATAATGTGTCCTTGAGAAAAATATTGACAGATCCAACTATGAACAAGCAGTGGTTTGAAAGAACATCTCTATCAAATCTCAGGGCTCCATTGAAAAAAATATCATGGAATTAAAATTGATTATCATGTTCCAAAGAAAAAAA]
[+] EMBL AU029903             [                                                                                          aatGGGATGG CNTTGAGGGAGAGATAAAA CGCCCAAATTTTGGCC ATTTCNTC TCTCCCGTGTTTT  GGCAATCCCGCCACTTTTTGGCGCATTGGATGGG CGCTTCTCATGGGAA CCTTTTTTTTCT CCTATACG CCAAAATG CCGATGG NGTATCGGATAGATGAGCTCCTGGGGGATGCTGTAAGTCAGTTGATGTAT CCTTCACCGGTTGTTTGTA GGTATCTTATAATGTGTCCTTGAGAAAAATATTGACAGATCCAACTATGAACAAGCAGTGGTTTGAAAGAACATCTCTATCAAATCTCAGGGCTCCATTGAAAAAAATATCATGGAATTAAAATTGATTATCATGTTCCAAAGAAAAAAA]
[+] EMBL AU029902             [                                                                                                 TGGCCNTTAA GGAGAGAT AAACCGCCCAAA TTTGG CNATTTC TCNTCTCCCGTG TTTTGGGCAAT CCGCCAC TTTTGGCGCATTGGAT GGCCGCTTCTCAT GGAACCCTTTTTTTTCTCCCTATACGCCCAAAATGCCCGATGGAGGTATCGGATAGATGAGCTCCT GGGGATGCTGTAAGTCAGTTGATGTATCCCTTCACCGGTTGTTTGTAGGGTATCTTATAATGTGTCCTTGAGAAAAATATTGACAGATCCAACTATGAACAAGCAGTGGTTTGAAAGAACATCTCTATCAAATCTCAGGGCTCCATTGAAAAAAATATCATGGAATTAAAATTGATTATCATGTTCCAAAGAAAAAAA]




>consensus_5159#0
GTAGCCACCGGTGCGTCCTCTCTTCCCTCTTCCTTCACCCTTCATGCTCGATCCAGATGG
GGGCGGGAGAACCGGATGGGAGCGTCAGTTATGGGGATGGCNTTGAGGAGAGATAAACGC
CCAAATTTGGCATTTCTCTCTCCCGTGTTTGGCAATCCGCCACTTTTGGCGCATTGGATG
GCGCTTCTCATGGAACCTTTTTTTTCTCCTATACGCCAAAATGCCGATGGNGTATCGGAT
AGATGAGCTCCTGGGGATGCTGTAAGTCAGTTGATGTATCCTTCACCGGTTGTTTGTAGG
TATCTTATAATGTGTCCTTGAGAAAAATATTGACAGATCCAACTATGAACAAGCAGTGGT
TTGAAAGAACATCTCTATCAAATCTCAGGGCTCCATTGAAAAAAATATCATGGAATTAAA
ATTGATTATCATGTTCCAAAGAAAAAAA

clustalw multiple alignements is not computed in this case