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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5187 cluster # 5187       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5187#0 length = 688 sequences # 3  

consensusID : consensus_5187#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 688
fasta sequence
                              [TTTTTTTTTTTTTTTAGGAAAATTGACAGGTTTTTCATTTCTAGAATCCAAGTTTTGCACTTTGCACAGACAGCTTCCTCAAGTTGTTCTGTACTCAAAGAACAATATGATTTTCTATCACCCACAGAGCCTAACTAAAAGATATCCTCATCTGATTCCAACAAATTTAAATGGAAACCACAGCTGCAATGATCAGCAACACCATTGCAAGAACTCGCGCGCCCCATCGATCTGCAGCTTGAGCCGATAACTTGCTGTTTACCTGGTGAATCTGTGGCTTTTGCAAGTCTTTCAGTAGACCACAGTACAATGCATTATCTGGCATGATCATTTCAGTGATGTTGTATCCCAGTGGATCAGCCACTTTCACATAGACCTCCTGCCCATTGTACCAGTTATCCAGCTTCTCAGACCGGAGATTCCAGATGCCAACGTTGTCGAGCGAGACTAGAACCGCAGTCCACCCTCCAGGGAAAACCTGAGTAGTGCTGCGAGAGATGGCATCCCATTTGTTGTACCTACTCCTGCAATCTGGAGTCCAATCACCATTATCCATCCCAACAACAAAGAATGAGTAACCATCCAGATGGTAGGTCTGAACACCAGTGTCATTGTTCTGAAAGACGATCTCGAGGAAGCCCTTGTACGATGCGTTCAGCGTGGATGAAGCCATTTTTGGTGGAGCATT]

[+] EMBL CA759939             [TTTTTTTTTTTTTTTAGGAAAATTGACAGGTTTTTCATTTCTAGAATCCAAGTTTTGCACTTTGCACAGACAGCTTCCTCAAGTTGTTCTGTACTCAAAGAACAATATGATTTTCTATCACCCACAGAGCCTAACTAAAAGATATCCTCATCTGATTCCAACAAATTTAAATGGAAACCACAGCTGCAATGATCAGCAACACCATTGCAAGAACTCGCGCGCCCCATCGATCTGCAGCTTGAGCCGATAACTTGCTGTTTACCTGGTGAATCTGTGGCTTTTGCAAGTCTTTCAGTAGACCACAGTACAATGCATTATCTGGCATGATCATTTCAGTGATGTTGTATCCCAGTGGATCAGCCACTTTCACATAGACCTCCTGCCCATTGTACCAGTTATCCAGCTTCTCAGACCGGAGATTCCAGATGCCAACGTTGTCGAGCGAGACTAGAACCGCAGTCCACCCTCCAGGGAAAACCTGAGTAGTGCTGCGAGAGATGGCATCCCATTTGTTGTACCTACTCCTGCAATCTGGAGTCCAATCACCATTATCCATCCCAACAACAAAGAATGAGTAACCATCCAGATGGTAGGTCTGAACACCAGTGTCATTGTTCTGAAAGACGATCTCGAGGAAGCCCTTGTACGATGCGTTCAGCGTGGATGAAGCCATTTTTGGTGGAGCATT]
[+] EMBL CA759940             [TTTTTTTTTTTTTTTAGGAAAATTGACAGGTTTTTCATTTCTAGAATCCAAGTTTTGCACTTTGCACAGACAGCTTCCTCAAGTTGTTCTGTACTCAAAGAACAATATGATTTTCTATCACCCACAGAGCCTAACTAAAAGATATCCTCATCTGATTCCAACAAATTTAAATGGAAACCACAGCTGCAATGATCAGCAACACCATTGCAAGAACTCGCGCGCCCCATCGATCTGCAGCTTGAGCCGATAACTTGCTGTTTACCTGGTGAATCTGTGGCTTTTGCAAGTCTTTCAGTAGACCACAGTACAATGCATTATCTGGCATGATCATTTCAGTGATGTTGTATCCCAGTGGATCAGCCACTTTCACATAGACCTCCTGCCCATTGTACCAGTTATCCAGCTTCTCAGACCGGAGATTCCAGATGCCAACGTTGTCGAGCGAGACTAGAACCGCAGTCCACCCTCCAGGGAAAACCTGAGTAGTGCTGCGAGAGATGGCATCCCATTTGTTGTACCTACTCCTGCAATCTGGAGTCCAATCACCATTATCCATCCCAACAACAAAGAATGAGTAACCATCCAGATGGTAGGTCTGAACACCAGTGTCATTGTTCTGAAAGACGATCTCGAGGAAGCCCTTGTACGATGCGTTCAGCGTGGATGAAGCCATTTTTGGTGGAGCATT]
[+] EMBL CA759938             [TTTTTTTTTTTTTTTAGGAAAATTGACAGGTTTTTCATTTCTAGAATCCAAGTTTTGCACTTTGCACAGACAGCTTCCTCAAGTTGTTCTGTACTCAAAGAACAATATGATTTTCTATCACCCACAGAGCCTAACTAAAAGATATCCTCATCTGATTCCAACAAATTTAAATGGAAACCACAGCTGCAATGATCAGCAACACCATTGCAAGAACTCGCGCGCCCCATCGATCTGCAGCTTGAGCCGATAACTTGCTGTTTACCTGGTGAATCTGTGGCTTTTGCAAGTCTTTCAGTAGACCACAGTACAATGCATTATCTGGCATGATCATTTCAGTGATGTTGTATCCCAGTGGATCAGCCACTTTCACATAGACCTCCTGCCCATTGTACCAGTTATCCAGCTTCTCAGACCGGAGATTCCAGATGCCAACGTTGTCGAGCGAGACTAGAACCGCAGTCCACCCTCCAGGGAAAACCTGAGTAGTGCTGCGAGAGATGGCATCCCATTTGTTGTACCTACTCCTGCAATCTGGAGTCCAATCACCATTATCCATCCCAACAACAAAGAATGAGTAACCATCCAGATGGTAGGTCTGAACACCAGTGTCATTGTTCTGAAAGACGATCTCGAGGAAGCCCTTGTACGATGCGTTCAGCGTGGATGAAGCCATTTTTGGTGGAGCATT]


>consensus_5187#0 TTTTTTTTTTTTTTTAGGAAAATTGACAGGTTTTTCATTTCTAGAATCCAAGTTTTGCAC TTTGCACAGACAGCTTCCTCAAGTTGTTCTGTACTCAAAGAACAATATGATTTTCTATCA CCCACAGAGCCTAACTAAAAGATATCCTCATCTGATTCCAACAAATTTAAATGGAAACCA CAGCTGCAATGATCAGCAACACCATTGCAAGAACTCGCGCGCCCCATCGATCTGCAGCTT GAGCCGATAACTTGCTGTTTACCTGGTGAATCTGTGGCTTTTGCAAGTCTTTCAGTAGAC CACAGTACAATGCATTATCTGGCATGATCATTTCAGTGATGTTGTATCCCAGTGGATCAG CCACTTTCACATAGACCTCCTGCCCATTGTACCAGTTATCCAGCTTCTCAGACCGGAGAT TCCAGATGCCAACGTTGTCGAGCGAGACTAGAACCGCAGTCCACCCTCCAGGGAAAACCT GAGTAGTGCTGCGAGAGATGGCATCCCATTTGTTGTACCTACTCCTGCAATCTGGAGTCC AATCACCATTATCCATCCCAACAACAAAGAATGAGTAACCATCCAGATGGTAGGTCTGAA CACCAGTGTCATTGTTCTGAAAGACGATCTCGAGGAAGCCCTTGTACGATGCGTTCAGCG TGGATGAAGCCATTTTTGGTGGAGCATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)