These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5211#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2608 fasta sequence [CTCCCTAACTAACTAAACCCAAACCCCGAACTCGCCACCGCCTGTCCGCCTCCAGAGTCCCAACCGCCGCCCTCGCCGTCGTCTCGTCTCGTCTCGCCCGCCTCCATGGCGACCTCCGCCTCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCGCCGGACGACACCCTCTTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCGCCGGACCTCCACGCCGCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCCTTCCTCGCCTCCCACCTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGACCACACCGCTGCCACCTCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCACGGCGCGCTCCGCTTCGGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTCGAGCTCACCCGCGCGTTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTCCTCCTCATCGAGGCCGCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAACCGCGTCTTCATCTTCCGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACGCCCTCCCTCGACGCCGCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCCGACGCCGTCCAGGCCGCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAGAACCTCCACACCGTGCGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAGCCTTGCTTGATCGCCCGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAACACGCGGCGAGGATAGAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTGAGGACATCGGTGCGCATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAGGCACCGAGGGGTTACCCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCAGAGTTGGGGATGAAAATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAGGGGGAGGAAGGGAAGGGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGGTGCTTCAATGGTCTGCTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATGCAGTATTACAAAAGCTCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTGCGTCGAATTGATGAAATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGACCTTCCTCCGAGCGACGATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAACTCTGTGCAAGGCAGCAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGTCAAAGGAAAAATGTCTCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAGATTACAGAGTCCATGCAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTTCCTGCAAACAGGAAAGACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCCATGGAATCTGTGCTAGGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGAAAATCTTCATCATCTGACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCAGCGAAGAATCTGGTGAGAAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTGAATAAAGAACTCAGTATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGATACCAGCAATGAGGGTCCATCAGGTGCTGCAGATACTGATGGGGAGATGA--CCCCAGT-T--GATGT--GGACC-TGAACCTTGTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAAC-ATGTCTTTTGAGATCTGACATG-TATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAACAAACTTCAGCTACCTAACATAAACTGT] [+] EMBL AK067377 [CTCCCTAACTAACTAAACCCAAACCCCGAACTCGCCACCGCCTGTCCGCCTCCAGAGTCCCAACCGCCGCCCTCGCCGTCGTCTCGTCTCGTCTCGCCCGCCTCCATGGCGACCTCCGCCTCCGCCTCCACCTCCAGCCCCTTCCCGTTCCCCGCCCGCCGCCCGCCGGACGACACCCTCTTCTACGCCGTCTACTCGCTCCCCCTCCCCACCGCCCTCCCGCCGCCGGACCTCCACGCCGCGCTCCGGTCCCTCCACCTCTCCCTCTCCTCCCACCTCGCCCCCTTCCTCGCCTCCCACCTCTTCCACCGCGACGCCTTCGCGCTCACCATCCCGCCGCCCGACCACACCGCTGCCACCTCCCCCTGCGCGCTCTGCGCCTCCCCCCCCGTCCCGCACCTCCACGGCGCGCTCCGCTTCGGCGACTCCCTCGCCGACGAGTGGCTCGGTGTCTCCCTCCTCTTCGAGCTCACCCGCGCGTTCCCGAGCCTCGCCGTGCGCGCGTGGGACTCCGACGGGGAGTTCCTCCTCATCGAGGCCGCCTTCGCGCTCCCGCGGTGGCTCGACCCGGACACCGCCCCGAACCGCGTCTTCATCTTCCGCGGCGAGCTCCACATCCTGCCGCCGTCGCTCTTCCCCGGGACGCCCTCCCTCGACGCCGCGCTCGCCGCCGTCCATGATGACGCCGTCGACACCCGCGCCCCCGACGCCGTCCAGGCCGCCATACAGCGCCGCATCGCCGGGCTGCCTGAGAAGGCCTCGGAGAACCTCCACACCGTGCGCGTCATTGTCCCGGTGCCCGTGGCGAAGGTGCTGAAGGAGGAGCCTTGCTTGATCGCCCGCGCCGTCGAGGGGTTCTATGACCGGGACATAGACACCATGAAACACGCGGCGAGGATAGAGAAATTCCTCAGGGGACCTGGCGGAGAGGGGGTTGAGATGGTGAGGACATCGGTGCGCATGACGCGGGCAATGTACGCGCAGCTCGTGCAGCAGAACTTTCAGGCACCGAGGGGTTACCCCATGCCGAGGAGGGAGGAGGGGCCGGAGAAGTGGATGGAGGCAGAGTTGGGGATGAAAATTGCTTGTGGGTTTGAGATGATGTATCAGGAGAGGCGGCGGGAGGGGGAGGAAGGGAAGGGGAGCACATGGGAGGTTTACAGGAAGAGCTTGGAGGCGACAGGGTGCTTCAATGGTCTGCTTCCTGGGTCAAAAGAGTACAAGAGGGTTATGGAGGATGCAATGCAGTATTACAAAAGCTCGAGTTTGTTTTCACGAACAAGGGAGATACTAAGTGCTCCTGTGCGTCGAATTGATGAAATCCTTGCCATGCCATACTCGGCTGAGGAATTTGAAGGCAGTGACCTTCCTCCGAGCGACGATGACTCTTGGTTGTATAATGGGGAGGATGAGTTAGCTGCGGAACTCTGTGCAAGGCAGCAGGAAATGGAAGAGTATGAAACTGCAAAACAATACAGAAAAAGTCAAAGGAAAAATGTCTCAGGCAGTTCTAGCTCGCAGTCAAACGAGTTTAATCTTGGAGAGATTACAGAGTCCATGCAAGAATTTGTTCGCAAAATGTCAAGCTTTGAGGGAGCTGAAGTTCCTGCAAACAGGAAAGACATGGAATCAGTGGATCTGGATGTCAACCAGTTCTTCAAGGCCATGGAATCTGTGCTAGGTCGTTCAAAAGATGAACCTGGCAATGAAGCCGGGTTTGATGGAAAATCTTCATCATCTGACATAGACCTTGAAGACGATTCTGATTATGGGAGTGATTTCAGCGAAGAATCTGGTGAGAAGGGTATGGATAATGCTTTCATGGAATCATATTCTGATGCACTGAATAAAGAACTCAGTATGACCACTATAGAGAAAAGTTTCGCTCGTGCACCGCACCCTGATACCAGCAATGAGGGTCCATCAGGTGCTGCAGATACTGATGGGGAGATGA CCCCAGT T GATGT GGACC TGAACCTTGTTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAAC ATGTCTTTTGAGATCTGACATG TATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAACAAACTTCAGCTACCTAACATAAACTGT] [+] EMBL BQ907191 [ GGGAGATGACCCCCCAGTGTGAGATGTTNGGACCTTGANCCTT TTGAGAGCTTCCTTAACTCTTACTCCTCTCAACAGGGTCTCCCAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATATTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAACAATGTCTTTTGAGATCTGACATGCTATAGCAAGCAGTTGTTTATGCAaaaaaaa ] [-] EMBL CB684175 [ CAGGCCCAGCTTCCAATCTGCTGGGACTTATGGGTGTAAAAGTACCTCCTGATGGTAAAAAGCCGTGATCTTTTTGTTTGTACCCATGCACATCAAATTTCTGGAACCATAGCAAGAACATACATATGATATTTATTGCAAAACATAGGAGATCATGGTCCAAGTAGTTTTCTTGTATGTTCAAACCTCAAAGAAAGGAACTGGAAGTAGGACTTGTGACTTTGTGAGAGCTCAAGCGGCCAGCTTGGTCTCTCAACCGGCATCATTTGGATAAGTAAAATTTTGGCCTGACAAGCATGTTCCGTTCCTGTATTCCCTGTACTGCTCCGGTATCATTGGAAGACGTAGGGCTCACTCAACACAGGCCATGGGTGTGGGACAACTATGTACTATGAGTCTATGAGACAACTATAGTCAAAGCAGCTAGCATTTATATGTGGTAGTAGCTAATACTGTTGTATTATGCAATTCTGTAAC ATGTCTTTTGAGATCTGACATG TATAGCAAGCAGTTGTTTATGCAGTTCTTGGAGTAGCATATTTGTTCTGAGGCATGAACGAACTTCAGCTACCTAACA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||