cluster # 5212

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Oryza sativa
cluster # 5212 cluster # 5212 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5212#0 length = 1391 sequences # 3
consensusID : consensus_5212#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1391
fasta sequence
                              [AAATTAATCAACGGGCTCAAGCGTTAACACACACACACACCGATCACCGAACACGTCTGAATTCGCCACGGGCGACGCGCCGCCGCCGGATTCACGAGGATGCTAGTCCGCTGCCTCCTCGTCGTTGCCCTCGCCGCCGTCGTGGCCGCCGCCGCTGGGCGCCTCGCCTTGGCCAAGGAGAATAACGGCGGCCGTGGGAGATGGCAAGTGTACTCGCCGGCGCCGTCGCCGCAGAAGCACCCGTGCCTGGAGAACCCGCCGAACATGACGGAGAACACGGGCGGGGAGGCCGGCGACGTCGTCCACGGCTACGGCGGCCTGGAGTGCTACGCCACCGGCTCCCGCCGCTCCGGCGGCCGCGCCGTCATCCTCGTCTCCGACTACTACGGTTTCCGAGCACCAAAACTG-AGGAAAATAGCGGACAAAGTTGCATACCAGCTTGGATGCTACGTTGTGGTTCCTGATTTGTTGTTCGGGGACCCTTACACCGATGATCCAGCGAGGCCATTTGAGGAGTGGATCAAGACACACTCTCCGGTTGAAGCAGCTGAAAAGACTAAACCGCTTATTGCGGCTCTGAAGAAGGATGGGACGTCTACTGTTGGAGTTGGAGGTTACTGCTGGGGTGGAAAGGTGGCCGTGGAGCTATCAAAGACTGAAGAAACCAAAGCGGTTGTCATTTCGCATCCCGCGCTAGTGGTTGTAGATGACATGAAAGAGGTCATATGTCCCATTGAAATCCTTGGGGGTGAGCTTGATACCATCTCTCCACCTCAGCTAATACACCAGTTGGAGGATG-CCTTAGATCAGAACAAAAGGGTTCATCACTTGGTG-AAGGTC-TTCCGGGATGCGCCCCATGGCTTCGCCTGCAGATACAATGCTACCGA-CCCGTTCGCCGTC-AAAACTGCAGAAGAAGCTCGTGCTGACATGGTC-AAATGGTTTGACAAGTA-TCTGGAGATCATGAAGCGGTGAAAG-ATTCAGTTGCACGGTTCCTTGGACTTGGATATCCAATACTACTAAATAAGAAGAAAATGAACCACTAGGCGCCTCATGTATCCAGTAAATTACAAACCAATTATTTGGCTTACAGTTTCATCAAAATTTTCCTGCCTGAAGCATATGATGAAAAGCAATAAAGCAAAGAAAAGCTATATAGGCTGGGAAAAAAAAAGAGGACTCGAACCGGGTCTCTTCGGTGAGAACGGAGTATATCCTAAATAGCTAGAGCACTTACTCTATTCACTGAAATTTGCGTTCATCGATTCGTTAAAAAAAAGCTAGATCACGGATGCTGGTATAAGTCACATTTGTACCTATAAATTCACCTTAGAGCGTCAGTTTGCCAACTTACAAAGTGACACTGTTGTATCAAAATGACCAAAAAAAAAAAA]

[+] EMBL AK107541             [AAATTAATCAACGGGCTCAAGCGTTAACACACACACACACCGATCACCGAACACGTCTGAATTCGCCACGGGCGACGCGCCGCCGCCGGATTCACGAGGATGCTAGTCCGCTGCCTCCTCGTCGTTGCCCTCGCCGCCGTCGTGGCCGCCGCCGCTGGGCGCCTCGCCTTGGCCAAGGAGAATAACGGCGGCCGTGGGAGATGGCAAGTGTACTCGCCGGCGCCGTCGCCGCAGAAGCACCCGTGCCTGGAGAACCCGCCGAACATGACGGAGAACACGGGCGGGGAGGCCGGCGACGTCGTCCACGGCTACGGCGGCCTGGAGTGCTACGCCACCGGCTCCCGCCGCTCCGGCGGCCGCGCCGTCATCCTCGTCTCCGACTACTACGGTTTCCGAGCACCAAAACTG AGGAAAATAGCGGACAAAGTTGCATACCAGCTTGGATGCTACGTTGTGGTTCCTGATTTGTTGTTCGGGGACCCTTACACCGATGATCCAGCGAGGCCATTTGAGGAGTGGATCAAGACACACTCTCCGGTTGAAGCAGCTGAAAAGACTAAACCGCTTATTGCGGCTCTGAAGAAGGATGGGACGTCTACTGTTGGAGTTGGAGGTTACTGCTGGGGTGGAAAGGTGGCCGTGGAGCTATCAAAGACTGAAGAAACCAAAGCGGTTGTCATTTCGCATCCCGCGCTAGTGGTTGTAGATGACATGAAAGAGGTCAAATGTCCCATTGAAATCCTTGGGGGTGAGCTTGATACCATCTCTCCACCACAGCTAATACACCAGTTGGAGGATG CCTTAGATCAGAACAAAAGGGTTCATCACTTGGTG AAGATC TTCCCGGATGCGCCCCATGGCTTCGCCTGCAGATACAACGCTACCGA CCCGTTCGCCGTC AAAACTGCAGAAGAAGCTCGTGCTGACATGGTC AAATGGTTTGACAAGTA TCTGGAGATCATGAAGCGGTGAAAG ATTCAGTTGCACGGTTCCTTGGACTTGGATATCCAATACTACTAAATAAGAAGAAAATGAACCACTAGGCGCCTCATGTATCCAGTAAATTACAAACCAATTATTTGGCTTACAGTTTCATCAAAATTTTCC                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA766874             [                                                                                                                                                                                                                                                                                                                                                                                                                   ggCTGAAGGAAAATAGCGGACAAAGTTGCATACCAGCTTGGATGCTACGTTGTGGTTCCTGATTTGTTGTTCGGGGACCCTTACACCGATGATCCAGCGAGGCCATTTGAGGAGTGGATCAAGACACACTCTCCGGTTGAAGCAGCTGAAAATACCAAACCGCTTATTGCGGCCCTGAAGAAGGATGGGACGTCTACTGTTGGAGTTGGAGGTTACTGCTGGGGTGGAAAGGTGGCCGTGGAGCTATCAAAGACTGAAGAAACCAAAGCGGTTGTCATTTCGCATCCCGCTCTAGTGGTTGTAGATGACATGAAAGAGGTCATATGTCCCATTGAAATCCTTGGGGGTGAGCTTGATACCATCTCTNCACCTCAGCTAATACACCAGTTGGAGGATGCCCTTAGATCAGAACAAAANGGTTCATCACTTGGTGAAAGGTCTTTCCGGGATGCGCCCCATGGCTTCGCCTGCAGATACAATGCTACCGACCCCGTTCGCCGTCAAAAACTGCANAANAAGCTCGNGCTGACATGGTCAAAANGGNTTGACAAGTATTTTGNANATCATGNAGCGGGGAAAGAATTCAGTTGCNCGGNTNCTTGGg                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CA759846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTGGTTGTAGATGACATGAAAGAGGTCATATGTCCCATTGAAATCCTTGGGGGTGAGCTTGATACCATCTCTCCACCTCAGCTAATACACCAGTTGGAGGATG CCTTAGATCAGAACAAAAGGGTTCATCACTTGGTG AAGGTC TTCCAGGATGCGCCCCATGGCTTCGCCTGCAGATACAATGCTACCGA CCCGTTNGCCGTC AAAACTGCAGAAGAAGCTCGTGCTGACATGGTC AAATGGTTTGACAAGTA TCTGAAGATCATGAAGCGGTGAAAG ATTCAGTTGCACGGTTCCTTGGACTTGGATATCCAATACTACTAAATAAGAAGAAAATGAACCACTAGGCGCCTCATGTATCCAGTAAATTACAAACCAATTATTTGGCTTACAGTTTCATCAAAATTTTCCTGCCTGAAGCATATGATGAAAAGCAATAAAGCAAAGAAAAGCTATATAGGCTGGGAAAAAAAAAGAGGACTCGAACCGGGTCTCTTCGGTGAGAACGGAGTATATCCTAAATAGCTAGAGCACTTACTCTATTCACTGAAATTTGCGTTCATCGATTCGTTAAAAAAAAGCTAGATCACGGATGCTGGTATAAGTCACATTTGTACCTATAAATTCACCTTAGAGCGTCAGTTTGCCAACTTACAAAGTGACACTGTTGTATCAAAATGACCAAAAAAAAAAAA]




>consensus_5212#0
AAATTAATCAACGGGCTCAAGCGTTAACACACACACACACCGATCACCGAACACGTCTGA
ATTCGCCACGGGCGACGCGCCGCCGCCGGATTCACGAGGATGCTAGTCCGCTGCCTCCTC
GTCGTTGCCCTCGCCGCCGTCGTGGCCGCCGCCGCTGGGCGCCTCGCCTTGGCCAAGGAG
AATAACGGCGGCCGTGGGAGATGGCAAGTGTACTCGCCGGCGCCGTCGCCGCAGAAGCAC
CCGTGCCTGGAGAACCCGCCGAACATGACGGAGAACACGGGCGGGGAGGCCGGCGACGTC
GTCCACGGCTACGGCGGCCTGGAGTGCTACGCCACCGGCTCCCGCCGCTCCGGCGGCCGC
GCCGTCATCCTCGTCTCCGACTACTACGGTTTCCGAGCACCAAAACTGAGGAAAATAGCG
GACAAAGTTGCATACCAGCTTGGATGCTACGTTGTGGTTCCTGATTTGTTGTTCGGGGAC
CCTTACACCGATGATCCAGCGAGGCCATTTGAGGAGTGGATCAAGACACACTCTCCGGTT
GAAGCAGCTGAAAAGACTAAACCGCTTATTGCGGCTCTGAAGAAGGATGGGACGTCTACT
GTTGGAGTTGGAGGTTACTGCTGGGGTGGAAAGGTGGCCGTGGAGCTATCAAAGACTGAA
GAAACCAAAGCGGTTGTCATTTCGCATCCCGCGCTAGTGGTTGTAGATGACATGAAAGAG
GTCATATGTCCCATTGAAATCCTTGGGGGTGAGCTTGATACCATCTCTCCACCTCAGCTA
ATACACCAGTTGGAGGATGCCTTAGATCAGAACAAAAGGGTTCATCACTTGGTGAAGGTC
TTCCGGGATGCGCCCCATGGCTTCGCCTGCAGATACAATGCTACCGACCCGTTCGCCGTC
AAAACTGCAGAAGAAGCTCGTGCTGACATGGTCAAATGGTTTGACAAGTATCTGGAGATC
ATGAAGCGGTGAAAGATTCAGTTGCACGGTTCCTTGGACTTGGATATCCAATACTACTAA
ATAAGAAGAAAATGAACCACTAGGCGCCTCATGTATCCAGTAAATTACAAACCAATTATT
TGGCTTACAGTTTCATCAAAATTTTCCTGCCTGAAGCATATGATGAAAAGCAATAAAGCA
AAGAAAAGCTATATAGGCTGGGAAAAAAAAAGAGGACTCGAACCGGGTCTCTTCGGTGAG
AACGGAGTATATCCTAAATAGCTAGAGCACTTACTCTATTCACTGAAATTTGCGTTCATC
GATTCGTTAAAAAAAAGCTAGATCACGGATGCTGGTATAAGTCACATTTGTACCTATAAA
TTCACCTTAGAGCGTCAGTTTGCCAACTTACAAAGTGACACTGTTGTATCAAAATGACCA
AAAAAAAAAAA
clustalw multiple alignements is not computed in this case