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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5216 cluster # 5216       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5216#0 length = 773 sequences # 3  

consensusID : consensus_5216#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 773
fasta sequence
                              [AAAACAGTGATGGAGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTCCCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCGCCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGCCACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTCTCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTC-GGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAGCTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTACTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAGACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAATGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTGCATATGTTTGTCACAAGATTATATGTCTATCTAACCTGAAACCTGTGCTAGCT]

[+] EMBL AK108183             [AAAACAGTGATGGAGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTCCCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCGCCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGCCACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTCTCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTC GGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAGCTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTACTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAGACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAATGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTGCATATGTTTGTCACAAGATTATATGTCTATCTAACCTGAAACCTGTGCTAGCT]
[+] EMBL AU173039             [             AGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTCCCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCGCCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGCCACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAACTGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTCTCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTC GGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCA                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU173040             [                                                                                                                                                                                                                                                                                                                   TCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTCGGGTGGTTCTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGGAACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAGCTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTACTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAGACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAGTGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTGCATATGTTTGTCAAAAa                                    ]


>consensus_5216#0 AAAACAGTGATGGAGGCAAGGGTTGCCGGAGTGCCCGAAGACGAGGAATCCGGCCTCCTC CCCCGCCCGTCCGCCGCCGGCCGCCGCCCATCCGTCGCCGCCGCGCGCCGCGCGCCTCCG CCTCCAGTCTGGGCCACCGTGGACGGGCCCCTGGGGCTGCCGCTGGAGGAGGCGGAGGGC CACGCTCGCCGCTTCTTCCTCTGGGGGTTCGCCTGCCTCCCCTTCCTCTGGGCCATCAAC TGCTGCTACTTCTGGCCCGTCCTCCGCTCGCCGGCGACCTTCCCCTCTTCCGCCGCCTTC TCCCGAATCCGCCCCTATGTTGTCCGGTCAGCAATTGGCTTTACCATTTTCTCGGTGGTT CTACTCACCTGGGCCACAACATTTATAATTGGTGGCGAGCGATTATTTGGGCCAGGGTGG AACGATCTAGTGATGTACAACGTTGCAGACAAGCTTGGTATCAGTGGGTTCATGGGATAG CTTCCATTTTATGCCTCGTTTTGAGCAGTCTTCATCTGACCATTTGTCTCAGTTCCTGTA CTCTGTAAGACGATGTTTCCATCTGGTAAAGGTAGTAGCAGGTTTCACCCACATTGATAG ACTTCCTGGTTCTTGATACAATTTGATGTAGTGTAATGTCAGCCATCAGTTCATCACTAA TGGTTAGACTGAAGATCGCTGTGACTTGAGTTTGTAGAGAAAACAGATTGTTCCTAAGTG CATATGTTTGTCACAAGATTATATGTCTATCTAACCTGAAACCTGTGCTAGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)