Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5254 cluster # 5254       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5254#0 length = 355 sequences # 3  

consensusID : consensus_5254#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 355
fasta sequence
                              [GCGGACGAGGAGAAGAGCAAGTATGAGAAGAGCATTGGGGTCACAAGAGCAATGACCTTGAACAACCTTCAGACAGGTTTCCCTAACGTTTTTCAGGCGATGACGGGATTCGCCAGCGTTTGCATGGAAGCGTTTGAATCGGTGTACAACTTCAAGAGTTCAGATCGGATCCTTGATTCGAAGAGGCTACTAACATGAGATTCTGAGAAGTTGTCTTGTGTTGGTGCTTGGTAGGTCACTGTATAAAGTGTATACAGTTCTAGAGTTCTTGTAGAATAGCAGGTGGAACAGGGTTTAACTTACAACCGTCTCTGTCTGTTATCGTCTTCTATCTTATGGTACTAGAGTAGGCAGG]

[+] EMBL CF340000             [GCGGACGAGGAGAAGAGCAAGTATGAGAAGAGCATTGGGGTCACAAGAGCAATGACCTTGAACAACCTTCAGACAGGTTTCCCTAACGTTTTTCAGGCGATGACGGGATTCGCCAGCGTTTGCATGGAAGCGTTTGAATCGGTGTACAACTTCAAGAGTTCAGATCGGATCCTTGATTCGAAGAGGCTACTAACATGAGATTCTGAGAAGTTGTCTTGTGTTGGTGCTTGGTAGGTCACTGTATAAAGTGTATACAGTTCTAGAGTTCTTGTAGAATAGCAGGTGGAACAGGGTTTAACTTACAACCGTCTCTGTCTGTTATCGTCTTCTATCTTATGGTACTAGAGTAGGCAGG]
[+] EMBL CF340070             [GCGGACGAGGAGAAGAGCAAGTATGAGAAGAGCATTGGGGTCACAAGAGCAATGACCTTGAACAACCTTCAGACAGGTTTCCCTAACGTTTTTCAGGCGATGACGGGATTCGCCAGCGTTTGCATGGAAGCGTTTGAATCGGTGTACAACTTCAAGAGTTCAGATCGGATCCTTGATTCGAAGAGGCTACTAACATGAGATTCTGAGAAGTTGTCTTGTGTTGGTGCTTGGTAGGTCACTGTATAAAGTGTATACAGTTCTAGAGTTCTTGTAGAATAGCAGGTGGAACAGGGTTTAACTTACAACCGTCTCTGTCTGTTATCGTCTTCTATCTTATGGTACTAGAGTAGGCAGG]
[+] EMBL CF339070             [GCGGACGAGGAGAAGAGCAAGTATGAGAAGAGCATTGGGGTCACAAGAGCAATGACCTTGAACAACCTTCAGACAGGTTTCCCTAACGTTTTTCAGGCGATGACGGGATTCGCCAGCGTTTGCATGGAAGCGTTTGAATCGGTGTACAACTTCAAGAGTTCAGATCGGATCCTTGATTCGAAGAGGCTACTAACATGAGATTCTGAGAAGTTGTCTTGTGTTGGTGCTTGGTAGGTCACTGTATAAAGTGTATACAGTTCTAGAGTTCTTGTAGAATAGCAGGTGGAACAGGGTTTAACTTACAACCGTCTCTGTCTGTTATCGTCTTCTATCTTATGGTACTAGAGTAGGCAGG]


>consensus_5254#0 GCGGACGAGGAGAAGAGCAAGTATGAGAAGAGCATTGGGGTCACAAGAGCAATGACCTTG AACAACCTTCAGACAGGTTTCCCTAACGTTTTTCAGGCGATGACGGGATTCGCCAGCGTT TGCATGGAAGCGTTTGAATCGGTGTACAACTTCAAGAGTTCAGATCGGATCCTTGATTCG AAGAGGCTACTAACATGAGATTCTGAGAAGTTGTCTTGTGTTGGTGCTTGGTAGGTCACT GTATAAAGTGTATACAGTTCTAGAGTTCTTGTAGAATAGCAGGTGGAACAGGGTTTAACT TACAACCGTCTCTGTCTGTTATCGTCTTCTATCTTATGGTACTAGAGTAGGCAGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)