cluster # 5281

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Oryza sativa
cluster # 5281 cluster # 5281 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5281#0 length = 800 sequences # 3

consensusID : consensus_5281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 800
fasta sequence

                              [TTTCTGTGCCATTGCTGGGAATTATATTTCTAGTAATGTCATTAAGAAATACCAACGACAACCACTTCACAATTATGTTAATAAATAGGAA-ACAAATATAATTTTTACATTGGTCTTATGACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACA-TCCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAGGGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTCAAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCATGTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACTTTACCCACAAGATACAGTTCGGTGCCGCTAAACACCAAAGAGTAACAAAGCGTTTCCTCTACCTCACCCTAACACCGGCTTCCCCATGGGCGGTCCTCCCATCACCACACAGGTGAAAGGTCCCATGTACAATCCAAAAA]

[+] EMBL CB629785             [TTTCTGTGCCATTGCTGGGAATTATATTTCTAGTAATGTCATTAAGAAATACCAACGACAACCACATCACAATTATGTTAATAAATAGGAA ACAAATATAATTTTTACATTGGTCTTATGACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACA TCCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAGGGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTCAAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCATGTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACTTTACCCACAAGATACAGTTCGGTGCCGCTAAACACCAAAGAGTAACAAAGCGTTTCCTCTACCTCACCCTAACACCGGCTTCCCCATGGGCGGTCCTCCCATCACCACACAGGTGAAAGGTCCCATGTACAATCCAAAAA]
[+] EMBL CB635952             [                                                                 TTCACAATTATGTTAATAAATAGGAA ACAAATATAATTTTTACATTGGTTTTACTAAAAAATTTTACAATTTTTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACA TCCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAGGGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTCAAATGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCATGTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACTTTACCCACAAGATACAGTTCGGTGCCGCTAAACACC                                                                                                        ]
[-] EMBL BM421885             [                                                              tttTTCACAATTATGTTAATAAATAGGAAGACAAATATAATTTTTACA TGGTCTTATGACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAACAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACAGTCCTCAGCAACAGAACTTCTGGAAACAGCTGACCTTCTCTGAAATTTNGTGAGACAACAAGGGTGAGTACATAACGTACTCGCAAGTGTACGGGAATATGCAATATATGATACACGGCTTCAAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTG ACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTA CCCTCATGGGA                                                                                                                                                                                                                     ]




>consensus_5281#0
TTTCTGTGCCATTGCTGGGAATTATATTTCTAGTAATGTCATTAAGAAATACCAACGACA
ACCACTTCACAATTATGTTAATAAATAGGAAACAAATATAATTTTTACATTGGTCTTATG
ACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAA
TCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACAT
CCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAG
GGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTC
AAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGA
TACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCA
AAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACAC
AGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCAT
GTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACT
TTACCCACAAGATACAGTTCGGTGCCGCTAAACACCAAAGAGTAACAAAGCGTTTCCTCT
ACCTCACCCTAACACCGGCTTCCCCATGGGCGGTCCTCCCATCACCACACAGGTGAAAGG
TCCCATGTACAATCCAAAAA

clustalw multiple alignements is not computed in this case