These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5300#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 785 fasta sequence [TCTCCTCTCAGCCTCTCGCTCTTTCCTCCTCTCCTCTCTCTCTCACCGACGGCTAGGACGGGAGCGGCGCGGCAACGGCGGGCTTGGCACCGGCGGTGGCGGCCTCCCTTCCCCGACCTCCCATCCGACGCAGCACCGGCGGGCTCGGTACCGGCGACGGCCTCCCTTCCCTGACCTCCCATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCGGTTGGCCGGCACGGCGGC-TAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTCCACCCTACGGAGGAGCTCGGCGTGTGGCGGGCACAGCGACGGCCGCCGGTGGCAGATCTGGACGACGGGCGCGCAGCGGGCACGACGACGGCCGGCGGCGGCGATCCTCCCCCCTCCCCTCAACGCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTGCCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACACAGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGA-TTTTTTTTGTTTGCCGAATTTATTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTTGCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGAAAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATGGAATTTTTANAAAAA] [+] EMBL AK109656 [TCTCCTCTCAGCCTCTCGCTCTTTCCTCCTCTCCTCTCTCTCTCACCGACGGCTAGGACGGGAGCGGCGCGGCAACGGCGGGCTTGGCACCGGCGGTGGCGGCCTCCCTTCCCCGACCTCCCATCCGACGCAGCACCGGCGGGCTCGGTACCGGCGACGGCCTCCCTTCCCTGACCTCCCATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCGGTTGGCCGGCACGGCGGC TAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTCCACCCTACGGAGGAGCTCGGCGTGTGGCGGGCACAGCGACGGCCGCCGGTGGCAGATCTGGACGACGGGCGCGCAGCGGGCACGACGACGGCCGGCGGCGGCGATCCTCCCCCCTCCCCTCAACGCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTGCCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACACAGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGA TTTTTTTTGTTTGCCGAATTTATTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTTGCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGAAAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATG ] [+] EMBL C27785 [ CCTCCTCTCCTCTCTCTCTNACCGACGGCTAGGACGGGAGCGGCGCGNCAACGGCGGGCTTGGNACCGGCGGTGGCGGCCTCCCTTCCCCGACCTCCCATCCNACGCAGCACCGGCGGGCTCGGTACCGGCNACGGCCTCCCTTCCCTNACCTCCCATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCGGTTGGNCGGCACGG GGCTTAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTTCAANCTACGGAGGAGCTNGGCGT ] [+] EMBL AU092679 [ CCTCCCCTCAACGCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTGCCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACACAGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGATTTTTTTTTGTTTGCCGAATTTATTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTTGCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGAAAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATGGAATTTTTANAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||