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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5300 cluster # 5300       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5300#0 length = 785 sequences # 3  

consensusID : consensus_5300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 785
fasta sequence
                              [TCTCCTCTCAGCCTCTCGCTCTTTCCTCCTCTCCTCTCTCTCTCACCGACGGCTAGGACGGGAGCGGCGCGGCAACGGCGGGCTTGGCACCGGCGGTGGCGGCCTCCCTTCCCCGACCTCCCATCCGACGCAGCACCGGCGGGCTCGGTACCGGCGACGGCCTCCCTTCCCTGACCTCCCATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCGGTTGGCCGGCACGGCGGC-TAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTCCACCCTACGGAGGAGCTCGGCGTGTGGCGGGCACAGCGACGGCCGCCGGTGGCAGATCTGGACGACGGGCGCGCAGCGGGCACGACGACGGCCGGCGGCGGCGATCCTCCCCCCTCCCCTCAACGCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTGCCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACACAGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGA-TTTTTTTTGTTTGCCGAATTTATTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTTGCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGAAAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATGGAATTTTTANAAAAA]

[+] EMBL AK109656             [TCTCCTCTCAGCCTCTCGCTCTTTCCTCCTCTCCTCTCTCTCTCACCGACGGCTAGGACGGGAGCGGCGCGGCAACGGCGGGCTTGGCACCGGCGGTGGCGGCCTCCCTTCCCCGACCTCCCATCCGACGCAGCACCGGCGGGCTCGGTACCGGCGACGGCCTCCCTTCCCTGACCTCCCATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCGGTTGGCCGGCACGGCGGC TAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTCCACCCTACGGAGGAGCTCGGCGTGTGGCGGGCACAGCGACGGCCGCCGGTGGCAGATCTGGACGACGGGCGCGCAGCGGGCACGACGACGGCCGGCGGCGGCGATCCTCCCCCCTCCCCTCAACGCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTGCCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACACAGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGA TTTTTTTTGTTTGCCGAATTTATTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTTGCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGAAAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATG               ]
[+] EMBL C27785               [                        CCTCCTCTCCTCTCTCTCTNACCGACGGCTAGGACGGGAGCGGCGCGNCAACGGCGGGCTTGGNACCGGCGGTGGCGGCCTCCCTTCCCCGACCTCCCATCCNACGCAGCACCGGCGGGCTCGGTACCGGCNACGGCCTCCCTTCCCTNACCTCCCATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCGGTTGGNCGGCACGG GGCTTAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTTCAANCTACGGAGGAGCTNGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU092679             [                                                                                                                                                                                                                                                                                                                                                                                                                         CCTCCCCTCAACGCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTGCCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACACAGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGATTTTTTTTTGTTTGCCGAATTTATTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTTGCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGAAAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATGGAATTTTTANAAAAA]


>consensus_5300#0 TCTCCTCTCAGCCTCTCGCTCTTTCCTCCTCTCCTCTCTCTCTCACCGACGGCTAGGACG GGAGCGGCGCGGCAACGGCGGGCTTGGCACCGGCGGTGGCGGCCTCCCTTCCCCGACCTC CCATCCGACGCAGCACCGGCGGGCTCGGTACCGGCGACGGCCTCCCTTCCCTGACCTCCC ATGGGCAGTGGCGACCTCCCTTCCCCGACGGCGGTGGGCACGGTGACGACGACGGCCGCG GTTGGCCGGCACGGCGGCTAATCCGGCGGTACTATCCTCGGGAGGGCCGGATTCTCCACC CTACGGAGGAGCTCGGCGTGTGGCGGGCACAGCGACGGCCGCCGGTGGCAGATCTGGACG ACGGGCGCGCAGCGGGCACGACGACGGCCGGCGGCGGCGATCCTCCCCCCTCCCCTCAAC GCCGCGGCGGCAGGGGCGGCTCGGCCGCCTCGGGCAGCGCTGCCCCGCGCCGATTCGGTG CCATCGACGACGGCGGGCGGCAGGGGCGACAGATCCGGCGACGGCGTGCGGTGGGGACAC AGCTTCCGGCGGCGGGCTAGGGTTTGGGGTTTTTTAGATTTTTTTTGTTTGCCGAATTTA TTTTCACATGCGTCCGGTATAAGCGACCGCATGTAAAAATGGGATTGCCCATTTTCGCTT GCGGTTGCGCCGGGCGCATGCAAAAAGAGCGATTTTTGCAGACGATCTCGCCCGCATGGA AAGACCCTTGTAGCCTGCATGAAAAAACACTTTTTCAGTAGTGTGTGATGGAATTTTTAN AAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)