These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5309#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 632 fasta sequence [GGCCTTCAAAAATTTTGCCCTTCAACCTCAATAGTGTCACCACGGGAACTCATTAGTAGCATGGGAATACANGAAAAAATGGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTTTGCAGGCTTCTGCAGTGGTCGTGGGTCAATCTTCACATCCATTTTCAGTTGTCCCACCTTGTTATTCTGGTCAGGCAGTTCAAAATGTGTTT] [+] EMBL CB636214 [GGCCTTCAAAAATTTTGCCCTTCAACCTCAATAGTGTCACCACGGGAACTCATTAGTAGCATGGGAATACANGAAAAAATGGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTTTGCAGGCTTCTGCAGTGGTCGTGGGTCAATCTTCACATCCATTTTCAGTTGTCCCACCTTGTTATTCTGGTCAGGCAGTTCAAAATGTGTTT] [+] EMBL CB636414 [ GCCTTCAATAGTTTTGCCCTTC ACCTCAATA TGTCACCACGGG ACTCATT GTAGCAT GGAATACA GAAAAAA GGCGAGTATCACCAGTACCAACGGTATAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATTTCCATCAGTACCATAACCAATCTTTGCAGGCTTCTGCAGTGGTCGTGGGTC ] [-] EMBL CA882853 [ TAGTATGGTGCATTTCGCTTTATCCGAGCACCACAAGGGGAGCAATATATTGGTGGGGGTTCAAAAGTAAGTTTTTCCACTTTGCAGAGCTGGCATGAATTCTCATTTTCATTATGCCCCATCAACTGATTCTTTTCAGCTTTAGCTTTACTCTGACCAACCCACAGCCTTAGACTATTGATATGTTCCTGAATTTGTTCTGGGGTGAACAATTCAGTCATTGAGACACCTTTTATCTTTGGTTTCCCTGATTTAGAAACTGTGATGTCTGTTGAATCATTTGCTTCATTCTTAACTTCAGGGGCAGTCTCACTTGTCTCTTTGTCAATTGGCATGATTTCTTGCTTGACATGAGTCTTGATCTCATTTGAGCCTCCAGGTGCCACATTATGTCTCGCTGTGGGCACATT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||