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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5323 cluster # 5323       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5323#0 length = 959 sequences # 3  

consensusID : consensus_5323#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 959
fasta sequence
                              [CCCGTCGACGAGCTCCTCGCCCTCGCGCCCTGCGCCCGCGCCAAGGGCGCCCACCTCATCTCCCTCACCTCCGCCGCATCCGGCGCCGACTGCCCGCTCGCCGCCGTGTGCGATCTCAACGTGCACCTTCCGCTGCAGGCCGAGGTGTGCCCCTTCGGCCTCGCTCCGGTGACCTCCACCGCCATACAGATGGTGTTCGGCGACACCGTCGTCGCCGCCATCATGGAGGCTCGCCGCCTCTCCAGGGACCAGTACGCCTCCAACCACCCCGCCGGCAAGATTGGCAAATCCCTCATCTTCAAGGTTAAGGATGTTATGAAGAAGCAAAATGAGCTTCCATTGTGCAAGGAGGGAGATATGATCATGGATCAACTCACTGAACTCACTAGTAAAGGCTGTGGGTGTCTACTTGTGGTTGATGATGAGTACCATTTGATCGGAACTTTCACTGATGGTGATCTCCGGCGTACACTCAAGGCAAGTGGGCAAGCAATTTTCAATCTGACAGTTGGAGAGATGTGCAACAGGCACCCAAGAACAATCACCGCTGATGCAATGGCAGTACAGGCCATGGAGAAGATGGAATCGCCCCCTTCTCCGGTGCAGTTCTTGCCAGTTGTTGATAGCAA-CAACGTTGTCTGTGGGATCATCACATTGCACGGATTGGTCTCAGCTGGACTATAATCTTTTCGCCTCATCTCCTT-GCGATTCTTTGCAAGTA-TTTGGTCCAGTACATCATCACGCTGGTTGCATGGATTCTTGTCAAATGGTGACGCCTTATCTTTGTACTAGTACGTGTAGCCTAGAGTGTTAAAGAGGCATTGTTTACCAGTGTCTCCTACGTCTAGTGTTCTAAAAGAGCAATGTGACAGTTGCTCGCTGGATGAATGTACCCTTCCCTCTGTAAATGAATGTGAGTTTAAGATGCAGTGGAATAAAAAGTTTAAGCCTAAAAAAAA]

[+] EMBL CF589235             [CCCGTCGACGAGCTCCTCGCCCTCGCGCCCTGCGCCCGCGCCAAGGGCGCCCACCTCATCTCCCTCACCTCCGCCGCATCCGGCGCCGACTGCCCGCTCGCCGCCGTGTGCGATCTCAACGTGCACCTTCCGCTGCAGGCCGAGGTGTGCCCCTTCGGCCTCGCTCCGGTGACCTCCACCGCCATACAGATGGTGTTCGGCGACACCGTCGTCGCCGCCATCATGGAGGCTCGCCGCCTCTCCAGGGACCAGTACGCCTCCAACCACCCCGCCGGCAAGATTGGCAAATCCCTCATCTTCAAGGTTAAGGATGTTATGAAGAAGCAAAATGAGCTTCCATTGTGCAAGGAGGGAGATATGATCATGGATCAACTCACTGAACTCACTAGTAAAGGCTGTGGGTGTCTACTTGTGGTTGATGATGAGTACCATTTGATCGGAACTTTCACTGATGGTGATCTCCGGCGTACACTCAAGGCAAGTGGGCAAGCAATTTTCAATCTGACAGTTGGAGAGATGTGCAACAGGCACCCAAGAACAATCACCGCTGATGCAATGGCAGTACAGGCCATGGAGAAGATGGAATCCCCCCCTTCTCCGGTGCAGTTCTTGCCAGTTGTTGATAGCAANCAACGTTGTCTGTGGGATCATCACATTGCACGGATTGGTCTCAGCTGGACTATAATCTTTTCGCCTCATCTCCTT GCGATTCTTTGCAAGTATTTTGGT CAGTACATCATCACGCTGGGTGCATGGATTCTTGTCAGATGGTGACGCCTT                                                                                                                                                                                    ]
[+] EMBL AU162360             [                                                                                                                                                                                                                                                                                                                                           AGCTTCCATTGTGCAAGGAGGGAGATATGATCATGGATCAACTCACTGAACTCACTAGTAAAGGCTGTGGGTGTCTACTTGTGGTTGATGATGAGTACCATTTGATCGGAACTTTCACTGATGGTGATCTCCGGCGTACACTCAAGGCAAGTGGGCAAGCAATTTTCAATCTGACAGTTGGAGAGATGTGCAACAGGCACCCAAGAACAATCACCGCTGATGCAATGGCAGTACAGGCCATGGAGAAGATGGAATCGCCCCCTTCTCCGGTGCAGTTCTTGCCAGTTGTTGATAGCAA CAACGTTGTCTGTGGGATCATCACATTGCACGGATTGGTCTCAGCTGGACTATAATCTTTTCGCCTCATCTCCTTGGCGATTCTTTGCAAGTA TTTGGTCCAGTACATCATCACGCTGGTTGCATGGATTCTTGTCAAATGGTGACGCCTTATCTTTGTACTAGTACGTGTAGCCTAGAGTGTTAAAGAGGCATTGTTTACCAGTGTCTCCTACGTCTAGTGTTCTAAAAGAGCAATGTGACAGTTGCT                                                                                  ]
[+] EMBL AU162361             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGAGATGTGCAACAGGCACCCAAGAACAATCACCGCTGATGCAATGGCAGTACAGGCCATGGAGAAGATGGAATCGCCCCCTTCTCCGGTGCAGTTCTTGCCAGTTGTTGATAGCAA CAACGTTGTCTGTGGGATCATCACATTGCACGGATTGGTCTCAGCTGGACTATAATCTTTTCGCCTCATCTCCTT GCGATTCTTTGCAAGTA TTTGGTCCAGTACATCATCACGCTGGTTGCATGGATTCTTGTCAAATGGTGACGCCTTATCTTTGTACTAGTACGTGTAGCCTAGAGTGTTAAAGAGGCATTGTTTACCAGTGTCTCCTACGTCTAGTGTTCTAAAAGAGCAATGTGACAGTTGCTCGCTGGATGAATGTACCCTTCCCTCTGTAAATGAATGTGAGTTTAAGATGCAGTGGAATAAAAAGTTTAAGCCTAAAAAAAA]


>consensus_5323#0 CCCGTCGACGAGCTCCTCGCCCTCGCGCCCTGCGCCCGCGCCAAGGGCGCCCACCTCATC TCCCTCACCTCCGCCGCATCCGGCGCCGACTGCCCGCTCGCCGCCGTGTGCGATCTCAAC GTGCACCTTCCGCTGCAGGCCGAGGTGTGCCCCTTCGGCCTCGCTCCGGTGACCTCCACC GCCATACAGATGGTGTTCGGCGACACCGTCGTCGCCGCCATCATGGAGGCTCGCCGCCTC TCCAGGGACCAGTACGCCTCCAACCACCCCGCCGGCAAGATTGGCAAATCCCTCATCTTC AAGGTTAAGGATGTTATGAAGAAGCAAAATGAGCTTCCATTGTGCAAGGAGGGAGATATG ATCATGGATCAACTCACTGAACTCACTAGTAAAGGCTGTGGGTGTCTACTTGTGGTTGAT GATGAGTACCATTTGATCGGAACTTTCACTGATGGTGATCTCCGGCGTACACTCAAGGCA AGTGGGCAAGCAATTTTCAATCTGACAGTTGGAGAGATGTGCAACAGGCACCCAAGAACA ATCACCGCTGATGCAATGGCAGTACAGGCCATGGAGAAGATGGAATCGCCCCCTTCTCCG GTGCAGTTCTTGCCAGTTGTTGATAGCAACAACGTTGTCTGTGGGATCATCACATTGCAC GGATTGGTCTCAGCTGGACTATAATCTTTTCGCCTCATCTCCTTGCGATTCTTTGCAAGT ATTTGGTCCAGTACATCATCACGCTGGTTGCATGGATTCTTGTCAAATGGTGACGCCTTA TCTTTGTACTAGTACGTGTAGCCTAGAGTGTTAAAGAGGCATTGTTTACCAGTGTCTCCT ACGTCTAGTGTTCTAAAAGAGCAATGTGACAGTTGCTCGCTGGATGAATGTACCCTTCCC TCTGTAAATGAATGTGAGTTTAAGATGCAGTGGAATAAAAAGTTTAAGCCTAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)