These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5339#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 670 fasta sequence [ACAATTACAAAAGTACCCGAGTAGTAAA-GGTGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC-AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC-TCC-CCTGCAC-GCTGGCCTATTATGCCACCGTT-GTTGGGCGTTTACATCTTCACCGACCGGCTTGGCTTC-CCGCCGCCGATTGGTGTTTCCCCTACACGGTAGGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCCACTGGTGTTT] [+] EMBL CA752734 [ACAATTACAAAAGTACCCGAGTAGTAAA GGGGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCC CTCCCGGTGCTAGGGGGCTATGACTAGTC CTCAGAGCGTTT AACGTAATGAGTAATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTT TCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGG CACACCACCGTTGNTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC TCC CCTGCAC GCTGGCCTATTATGCCACCGTT GTTGGGCGTTTACAT TTC CCGACCGGCTTGGCTTC CCGCCGCCGATTGGTGTTTCCCCTACACGGTAGGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCCACTGGTGTTT] [+] EMBL CA752689 [ACAA TACAAAAG GGCCGAGTAGTAAATTCTGATTCG GAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC TCCGCCTGCACGGCTGGCCTATTATGCCACCGTTGGTTGGGCGTCTACATCTTCACCGACCGG TTGCCTTCGCCGGCGgc ] [+] EMBL CA752666 [ACAATTACAAAAGTACCCGAGTAGTAAA TGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATCAAGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCG CGCCGCCGACTGGTGTCTTCG CCTGC C G TGGCCTATTATGCCACCCGT GGTGGGCGTTTACATCTTCACCGACCGGCTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||