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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5339 cluster # 5339       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5339#0 length = 670 sequences # 3  

consensusID : consensus_5339#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 670
fasta sequence
                              [ACAATTACAAAAGTACCCGAGTAGTAAA-GGTGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC-AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC-TCC-CCTGCAC-GCTGGCCTATTATGCCACCGTT-GTTGGGCGTTTACATCTTCACCGACCGGCTTGGCTTC-CCGCCGCCGATTGGTGTTTCCCCTACACGGTAGGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCCACTGGTGTTT]

[+] EMBL CA752734             [ACAATTACAAAAGTACCCGAGTAGTAAA GGGGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCC  CTCCCGGTGCTAGGGGGCTATGACTAGTC CTCAGAGCGTTT AACGTAATGAGTAATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTT  TCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGG CACACCACCGTTGNTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC TCC CCTGCAC GCTGGCCTATTATGCCACCGTT GTTGGGCGTTTACAT TTC CCGACCGGCTTGGCTTC CCGCCGCCGATTGGTGTTTCCCCTACACGGTAGGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCCACTGGTGTTT]
[+] EMBL CA752689             [ACAA TACAAAAG GGCCGAGTAGTAAATTCTGATTCG GAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATC AGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCGCCGCCGCCGACTGGTGTC TCCGCCTGCACGGCTGGCCTATTATGCCACCGTTGGTTGGGCGTCTACATCTTCACCGACCGG TTGCCTTCGCCGGCGgc                                                                                              ]
[+] EMBL CA752666             [ACAATTACAAAAGTACCCGAGTAGTAAA   TGATTCGTGAAACTTTGTTCCATTAATGACGAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGGGGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAAAATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGAGTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCCAGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGATCAAGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATACGGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTCG CGCCGCCGACTGGTGTCTTCG CCTGC C G TGGCCTATTATGCCACCCGT GGTGGGCGTTTACATCTTCACCGACCGGCTT                                                                                                             ]


>consensus_5339#0 ACAATTACAAAAGTACCCGAGTAGTAAAGGTGATTCGTGAAACTTTGTTCCATTAATGAC GAACTCATGTCACTCATATGCATGTTTGGGAAGTGCCTAGGCCGACTCCCGGTGCTAGGG GGCTATGACTAGTCGGACAGAGCGTTTAAACGTAATGAGTCATCTGCTCGGGGAAATCAA AATTGACAAGAGGAGAAATACATATTTATAAACATTTTAAAATACTTGAATTTTTCTCGA GTATTATATTTACATCAGATACTACTCATCCTATATGTTTGTTCTGCAGGATCCAGATCC AGATATGCACAAAAGGGATTCATGGCTTTAAGCTTATCTCTTACGCTCCAGCAAATGGAT CAGTCAGAACATCACCACCAGCTTGTCTTCGTCGCCGCCGACTGGTGTCTTCGCCTATAC GGTTGTTTGGTCACACCACCGTTGTTGGGCGTCTACGTCTTCACTGACCGGCTTGCCTTC GCCGCCGCCGACTGGTGTCTCCCCTGCACGCTGGCCTATTATGCCACCGTTGTTGGGCGT TTACATCTTCACCGACCGGCTTGGCTTCCCGCCGCCGATTGGTGTTTCCCCTACACGGTA GGCTATTATGCCACTGTGGTGGGCATTAACGTTTTAACGACCGGCCGCTTATTCGCGGCC ACTGGTGTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)